RNA–Protein interactions for RNA: ENST00000316052.5

EXOSC4-201, Transcript of exosome component 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EXOSC4, Length 887 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC4-201ENST00000316052 HSPBP1Q9NZL4 362 aa18.7■□□□□ 0.58
EXOSC4-201ENST00000316052 PTPRDP23468 1912 aa18.7■□□□□ 0.58
EXOSC4-201ENST00000316052 KIAA0391O15091 583 aaKnown RBP18.69■□□□□ 0.58
EXOSC4-201ENST00000316052 RNF40O75150 1001 aa18.69■□□□□ 0.58
EXOSC4-201ENST00000316052 TNNC2P02585 160 aa18.69■□□□□ 0.58
EXOSC4-201ENST00000316052 PDGFRBP09619 1106 aa18.69■□□□□ 0.58
EXOSC4-201ENST00000316052 MAGEA11P43364 429 aa18.69■□□□□ 0.58
EXOSC4-201ENST00000316052 MYO1EQ12965 1108 aa18.69■□□□□ 0.58
EXOSC4-201ENST00000316052 EPM2AIP1Q7L775 607 aaPredicted RBP18.69■□□□□ 0.58
EXOSC4-201ENST00000316052 DPH6Q7L8W6 267 aa18.69■□□□□ 0.58
EXOSC4-201ENST00000316052 ARL14EPQ8N8R7 260 aaPredicted RBP18.69■□□□□ 0.58
EXOSC4-201ENST00000316052 TTC16Q8NEE8 873 aa18.69■□□□□ 0.58
EXOSC4-201ENST00000316052 EZH1Q92800 747 aaPredicted RBP18.69■□□□□ 0.58
EXOSC4-201ENST00000316052 SYT15Q9BQS2 421 aa18.69■□□□□ 0.58
EXOSC4-201ENST00000316052 LINC00597Q9H2U6 94 aa18.69■□□□□ 0.58
EXOSC4-201ENST00000316052 DUS2Q9NX74 493 aaKnown RBP18.69■□□□□ 0.58
EXOSC4-201ENST00000316052 MAGEC2Q9UBF1 373 aaPredicted RBP18.69■□□□□ 0.58
EXOSC4-201ENST00000316052 NME7Q9Y5B8 376 aa18.69■□□□□ 0.58
EXOSC4-201ENST00000316052 WNT6Q9Y6F9 365 aa18.69■□□□□ 0.58
EXOSC4-201ENST00000316052 TRAV19A0A0A6YYK7 116 aa18.68■□□□□ 0.58
EXOSC4-201ENST00000316052 SLC30A4O14863 429 aa18.68■□□□□ 0.58
EXOSC4-201ENST00000316052 SPTLC2O15270 562 aa18.68■□□□□ 0.58
EXOSC4-201ENST00000316052 TGFB1I1O43294 461 aa18.68■□□□□ 0.58
EXOSC4-201ENST00000316052 ATG13O75143 517 aa18.68■□□□□ 0.58
EXOSC4-201ENST00000316052 CST3P01034 146 aaPredicted RBP18.68■□□□□ 0.58
EXOSC4-201ENST00000316052 CKMP06732 381 aa18.68■□□□□ 0.58
EXOSC4-201ENST00000316052 USP17L7P0C7H9 530 aa18.68■□□□□ 0.58
EXOSC4-201ENST00000316052 BDNFP23560 247 aa18.68■□□□□ 0.58
EXOSC4-201ENST00000316052 SURF1Q15526 300 aa18.68■□□□□ 0.58
EXOSC4-201ENST00000316052 RDH13Q8NBN7 331 aa18.68■□□□□ 0.58
EXOSC4-201ENST00000316052 ZNF507Q8TCN5 953 aa18.68■□□□□ 0.58
EXOSC4-201ENST00000316052 NETO1Q8TDF5 533 aa18.68■□□□□ 0.58
EXOSC4-201ENST00000316052 OSCP1Q8WVF1 389 aa18.68■□□□□ 0.58
EXOSC4-201ENST00000316052 GAB3Q8WWW8 586 aa18.68■□□□□ 0.58
EXOSC4-201ENST00000316052 MYLPFQ96A32 169 aa18.68■□□□□ 0.58
EXOSC4-201ENST00000316052 P2RY13Q9BPV8 354 aa18.68■□□□□ 0.58
EXOSC4-201ENST00000316052 CDH9Q9ULB4 789 aa18.68■□□□□ 0.58
EXOSC4-201ENST00000316052 SLC8A2Q9UPR5 921 aa18.68■□□□□ 0.58
EXOSC4-201ENST00000316052 R3HCC1Q9Y3T6 440 aaKnown RBP18.68■□□□□ 0.58
EXOSC4-201ENST00000316052 MYO16Q9Y6X6 1858 aa18.68■□□□□ 0.58
EXOSC4-201ENST00000316052 MAP1BP46821 2468 aaKnown RBP18.68■□□□□ 0.58
EXOSC4-201ENST00000316052 ABCA7Q8IZY2 2146 aa18.68■□□□□ 0.58
EXOSC4-201ENST00000316052 MYOFQ9NZM1 2061 aa18.67■□□□□ 0.58
EXOSC4-201ENST00000316052 CCDC163A0A0D9SF12 145 aa18.67■□□□□ 0.58
EXOSC4-201ENST00000316052 AXIN1O15169 862 aa18.67■□□□□ 0.58
EXOSC4-201ENST00000316052 HDCP19113 662 aa18.67■□□□□ 0.58
EXOSC4-201ENST00000316052 DRD1P21728 446 aa18.67■□□□□ 0.58
EXOSC4-201ENST00000316052 WARSP23381 471 aaKnown RBP18.67■□□□□ 0.58
EXOSC4-201ENST00000316052 USP46P62068 366 aa18.67■□□□□ 0.58
EXOSC4-201ENST00000316052 ZXDBP98169 803 aa18.67■□□□□ 0.58
EXOSC4-201ENST00000316052 AMPD2Q01433 879 aa18.67■□□□□ 0.58
EXOSC4-201ENST00000316052 USP4Q13107 963 aa18.67■□□□□ 0.58
EXOSC4-201ENST00000316052 EML3Q32P44 896 aa18.67■□□□□ 0.58
EXOSC4-201ENST00000316052 SHC4Q6S5L8 630 aa18.67■□□□□ 0.58
EXOSC4-201ENST00000316052 C4orf50Q6ZRC1 276 aa18.67■□□□□ 0.58
EXOSC4-201ENST00000316052 STXBP4Q6ZWJ1 553 aa18.67■□□□□ 0.58
EXOSC4-201ENST00000316052 TRAPPC11Q7Z392 1133 aa18.67■□□□□ 0.58
EXOSC4-201ENST00000316052 KBTBD6Q86V97 674 aa18.67■□□□□ 0.58
EXOSC4-201ENST00000316052 WDR49Q8IV35 697 aa18.67■□□□□ 0.58
EXOSC4-201ENST00000316052 CPA6Q8N4T0 437 aa18.67■□□□□ 0.58
EXOSC4-201ENST00000316052 SH3RF2Q8TEC5 729 aa18.67■□□□□ 0.58
EXOSC4-201ENST00000316052 DHX58Q96C10 678 aa18.67■□□□□ 0.58
EXOSC4-201ENST00000316052 SPATA17Q96L03 361 aa18.67■□□□□ 0.58
EXOSC4-201ENST00000316052 MRPL45Q9BRJ2 306 aaKnown RBP18.67■□□□□ 0.58
EXOSC4-201ENST00000316052 KMT2BQ9UMN6 2715 aaPredicted RBP18.66■□□□□ 0.58
EXOSC4-201ENST00000316052 CLIC2O15247 247 aa18.66■□□□□ 0.58
EXOSC4-201ENST00000316052 EIF3DO15371 548 aaKnown RBP eCLIP18.66■□□□□ 0.58
EXOSC4-201ENST00000316052 PPP6R2O75170 966 aa18.66■□□□□ 0.58
EXOSC4-201ENST00000316052 RPP40O75818 363 aaKnown RBP18.66■□□□□ 0.58
EXOSC4-201ENST00000316052 GRIK1P39086 918 aa18.66■□□□□ 0.58
EXOSC4-201ENST00000316052 RAP1GAPP47736 663 aa18.66■□□□□ 0.58
EXOSC4-201ENST00000316052 ASIC1P78348 528 aa18.66■□□□□ 0.58
EXOSC4-201ENST00000316052 CCDC6Q16204 474 aa18.66■□□□□ 0.58
EXOSC4-201ENST00000316052 SNRNP35Q16560 246 aaKnown RBP18.66■□□□□ 0.58
EXOSC4-201ENST00000316052 CNNM4Q6P4Q7 775 aa18.66■□□□□ 0.58
EXOSC4-201ENST00000316052 VSTM1Q6UX27 236 aa18.66■□□□□ 0.58
EXOSC4-201ENST00000316052 CACNA2D4Q7Z3S7 1137 aa18.66■□□□□ 0.58
EXOSC4-201ENST00000316052 FSIP1Q8NA03 581 aa18.66■□□□□ 0.58
EXOSC4-201ENST00000316052 PCED1BQ96HM7 432 aa18.66■□□□□ 0.58
EXOSC4-201ENST00000316052 CNTNAP3BQ96NU0 1288 aa18.66■□□□□ 0.58
EXOSC4-201ENST00000316052 MMS19Q96T76 1030 aa18.66■□□□□ 0.58
EXOSC4-201ENST00000316052 CNTNAP3Q9BZ76 1288 aa18.66■□□□□ 0.58
EXOSC4-201ENST00000316052 LRRC27Q9C0I9 530 aa18.66■□□□□ 0.58
EXOSC4-201ENST00000316052 ARRDC1-AS1Q9H2J1 176 aa18.66■□□□□ 0.58
EXOSC4-201ENST00000316052 KIAA1586Q9HCI6 787 aa18.66■□□□□ 0.58
EXOSC4-201ENST00000316052 AGPAT3Q9NRZ7 376 aa18.66■□□□□ 0.58
EXOSC4-201ENST00000316052 HELZP42694 1942 aaKnown RBP18.66■□□□□ 0.58
EXOSC4-201ENST00000316052 K7ELQ4 463 aaPredicted RBP18.65■□□□□ 0.58
EXOSC4-201ENST00000316052 DLATP10515 647 aaKnown RBP18.65■□□□□ 0.58
EXOSC4-201ENST00000316052 CASP1P29466 404 aa18.65■□□□□ 0.58
EXOSC4-201ENST00000316052 GNL1P36915 607 aaPredicted RBP18.65■□□□□ 0.58
EXOSC4-201ENST00000316052 IFNAR2P48551 515 aa18.65■□□□□ 0.58
EXOSC4-201ENST00000316052 CYP27A1Q02318 531 aa18.65■□□□□ 0.58
EXOSC4-201ENST00000316052 SF3A2Q15428 464 aaKnown RBP18.65■□□□□ 0.58
EXOSC4-201ENST00000316052 FAM26FQ5R3K3 315 aa18.65■□□□□ 0.58
EXOSC4-201ENST00000316052 RPLP0P6Q8NHW5 317 aa18.65■□□□□ 0.58
EXOSC4-201ENST00000316052 MYCBPAPQ8TBZ2 947 aa18.65■□□□□ 0.58
EXOSC4-201ENST00000316052 SCFD1Q8WVM8 642 aa18.65■□□□□ 0.58
EXOSC4-201ENST00000316052 ZNF516Q92618 1163 aa18.65■□□□□ 0.58
EXOSC4-201ENST00000316052 CD101Q93033 1021 aa18.65■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 77.1 ms