RNA–Protein interactions for RNA: ENST00000233242.5

APOB-201, Transcript of apolipoprotein B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene APOB, Length 14,121 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOB-201ENST00000233242 RBP1P09455 135 aa8.52□□□□□ -1.04
APOB-201ENST00000233242 ALOX5P09917 674 aa8.52□□□□□ -1.04
APOB-201ENST00000233242 EIF2AK2P19525 551 aaKnown RBP8.52□□□□□ -1.04
APOB-201ENST00000233242 BNC1Q01954 994 aa8.52□□□□□ -1.04
APOB-201ENST00000233242 NAB1Q13506 487 aa8.52□□□□□ -1.04
APOB-201ENST00000233242 PDK2Q15119 407 aa8.52□□□□□ -1.04
APOB-201ENST00000233242 FAM45BPQ6NSW5 357 aa8.52□□□□□ -1.04
APOB-201ENST00000233242 ERO1BQ86YB8 467 aa8.52□□□□□ -1.04
APOB-201ENST00000233242 DIS3LQ8TF46 1054 aaKnown RBP8.52□□□□□ -1.04
APOB-201ENST00000233242 LBHD1Q9BQE6 289 aaPredicted RBP8.52□□□□□ -1.04
APOB-201ENST00000233242 NEO1Q92859 1461 aa8.52□□□□□ -1.04
APOB-201ENST00000233242 HIST1H2AGP0C0S8 130 aaPredicted RBP8.52□□□□□ -1.04
APOB-201ENST00000233242 HIST1H2ADP20671 130 aa8.52□□□□□ -1.04
APOB-201ENST00000233242 SRBD1Q8N5C6 995 aaKnown RBP8.52□□□□□ -1.04
APOB-201ENST00000233242 HIST1H2AHQ96KK5 128 aa8.52□□□□□ -1.04
APOB-201ENST00000233242 DEPDC7Q96QD5 511 aa8.52□□□□□ -1.04
APOB-201ENST00000233242 HIST1H2AJQ99878 128 aa8.52□□□□□ -1.04
APOB-201ENST00000233242 H2AFJQ9BTM1 129 aa8.52□□□□□ -1.04
APOB-201ENST00000233242 STARD13Q9Y3M8 1113 aa8.52□□□□□ -1.04
APOB-201ENST00000233242 SUPT3HB4E1H0 165 aa8.52□□□□□ -1.05
APOB-201ENST00000233242 RIPK2O43353 540 aa8.52□□□□□ -1.05
APOB-201ENST00000233242 DGKIO75912 1065 aa8.52□□□□□ -1.05
APOB-201ENST00000233242 PSMG1O95456 288 aa8.52□□□□□ -1.05
APOB-201ENST00000233242 PDGFRAP16234 1089 aa8.52□□□□□ -1.05
APOB-201ENST00000233242 DSTYKQ6XUX3 929 aa8.52□□□□□ -1.05
APOB-201ENST00000233242 MRPL48Q96GC5 212 aaKnown RBP8.52□□□□□ -1.05
APOB-201ENST00000233242 TCF7L2Q9NQB0 619 aa8.52□□□□□ -1.05
APOB-201ENST00000233242 STK39Q9UEW8 545 aa8.52□□□□□ -1.05
APOB-201ENST00000233242 TET3O43151 1660 aa8.52□□□□□ -1.05
APOB-201ENST00000233242 IL18RAPO95256 599 aa8.52□□□□□ -1.05
APOB-201ENST00000233242 MUTP22033 750 aa8.52□□□□□ -1.05
APOB-201ENST00000233242 HERVK_113P62684 666 aa8.52□□□□□ -1.05
APOB-201ENST00000233242 TRIM28Q13263 835 aaKnown RBP8.52□□□□□ -1.05
APOB-201ENST00000233242 SAMD4BQ5PRF9 694 aaKnown RBP8.52□□□□□ -1.05
APOB-201ENST00000233242 ADGRF4Q8IZF3 695 aa8.52□□□□□ -1.05
APOB-201ENST00000233242 ATP9BO43861 1147 aa8.52□□□□□ -1.05
APOB-201ENST00000233242 NDUFS3O75489 264 aa8.52□□□□□ -1.05
APOB-201ENST00000233242 ATP1A4Q13733 1029 aa8.52□□□□□ -1.05
APOB-201ENST00000233242 TFDP3Q5H9I0 405 aa8.52□□□□□ -1.05
APOB-201ENST00000233242 AARS2Q5JTZ9 985 aaKnown RBP8.52□□□□□ -1.05
APOB-201ENST00000233242 NT5DC1Q5TFE4 455 aa8.52□□□□□ -1.05
APOB-201ENST00000233242 FBXO25Q8TCJ0 367 aa8.52□□□□□ -1.05
APOB-201ENST00000233242 LACRTQ9GZZ8 138 aa8.52□□□□□ -1.05
APOB-201ENST00000233242 LMCD1Q9NZU5 365 aa8.52□□□□□ -1.05
APOB-201ENST00000233242 RRM2P31350 389 aa8.52□□□□□ -1.05
APOB-201ENST00000233242 OVGP1Q12889 678 aa8.52□□□□□ -1.05
APOB-201ENST00000233242 NET1Q7Z628 596 aaPredicted RBP8.52□□□□□ -1.05
APOB-201ENST00000233242 TBC1D19Q8N5T2 526 aa8.52□□□□□ -1.05
APOB-201ENST00000233242 CPA5Q8WXQ8 436 aa8.52□□□□□ -1.05
APOB-201ENST00000233242 DDX50Q9BQ39 737 aaKnown RBP8.52□□□□□ -1.05
APOB-201ENST00000233242 REEP2Q9BRK0 252 aa8.52□□□□□ -1.05
APOB-201ENST00000233242 AK5Q9Y6K8 562 aa8.52□□□□□ -1.05
APOB-201ENST00000233242 C1orf232A0A0U1RR37 186 aa8.52□□□□□ -1.05
APOB-201ENST00000233242 CLOCKO15516 846 aa8.52□□□□□ -1.05
APOB-201ENST00000233242 QRICH1Q2TAL8 776 aa8.52□□□□□ -1.05
APOB-201ENST00000233242 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP8.52□□□□□ -1.056e-18■■□□□ 13.2
APOB-201ENST00000233242 NLGN1Q8N2Q7 840 aa8.52□□□□□ -1.05
APOB-201ENST00000233242 AGAP11Q8TF27 550 aa8.52□□□□□ -1.05
APOB-201ENST00000233242 ORAI2Q96SN7 254 aa8.52□□□□□ -1.05
APOB-201ENST00000233242 KLF6Q99612 283 aaPredicted RBP8.52□□□□□ -1.05
APOB-201ENST00000233242 STK32BQ9NY57 414 aa8.52□□□□□ -1.05
APOB-201ENST00000233242 PCDHA10Q9Y5I2 948 aa8.52□□□□□ -1.05
APOB-201ENST00000233242 A0A087X0T9 212 aa8.52□□□□□ -1.05
APOB-201ENST00000233242 FAM228BP0C875 321 aa8.52□□□□□ -1.05
APOB-201ENST00000233242 KCNT1Q5JUK3 1230 aa8.52□□□□□ -1.05
APOB-201ENST00000233242 TSHZ1Q6ZSZ6 1077 aa8.52□□□□□ -1.05
APOB-201ENST00000233242 KLHL23Q8NBE8 558 aa8.52□□□□□ -1.05
APOB-201ENST00000233242 RMND5AQ9H871 391 aa8.52□□□□□ -1.05
APOB-201ENST00000233242 TBX2Q13207 712 aaPredicted RBP8.52□□□□□ -1.05
APOB-201ENST00000233242 ACAD10Q6JQN1 1059 aa8.52□□□□□ -1.05
APOB-201ENST00000233242 TTI2Q6NXR4 508 aa8.52□□□□□ -1.05
APOB-201ENST00000233242 ZNF518BQ9C0D4 1074 aa8.52□□□□□ -1.05
APOB-201ENST00000233242 ZNF302Q9NR11 478 aa8.52□□□□□ -1.05
APOB-201ENST00000233242 SLC39A10Q9ULF5 831 aa8.52□□□□□ -1.05
APOB-201ENST00000233242 TPRKBQ9Y3C4 175 aa8.52□□□□□ -1.05
APOB-201ENST00000233242 VWA5AO00534 786 aa8.52□□□□□ -1.05
APOB-201ENST00000233242 PLEKP08567 350 aaPredicted RBP8.52□□□□□ -1.05
APOB-201ENST00000233242 CAMK1DQ8IU85 385 aa8.52□□□□□ -1.05
APOB-201ENST00000233242 RAB42Q8N4Z0 105 aa8.52□□□□□ -1.05
APOB-201ENST00000233242 S100ZQ8WXG8 99 aa8.52□□□□□ -1.05
APOB-201ENST00000233242 RORBQ92753 470 aa8.52□□□□□ -1.05
APOB-201ENST00000233242 APOPT1Q96IL0 206 aa8.52□□□□□ -1.05
APOB-201ENST00000233242 PPP1R36Q96LQ0 422 aa8.52□□□□□ -1.05
APOB-201ENST00000233242 RMI1Q9H9A7 625 aa8.52□□□□□ -1.05
APOB-201ENST00000233242 SH3GLB1Q9Y371 365 aa8.52□□□□□ -1.05
APOB-201ENST00000233242 ADCY10Q96PN6 1610 aa8.52□□□□□ -1.05
APOB-201ENST00000233242 MFN2O95140 757 aa8.52□□□□□ -1.05
APOB-201ENST00000233242 NUP62P37198 522 aaPredicted RBP8.52□□□□□ -1.05
APOB-201ENST00000233242 PTGER2P43116 358 aa8.52□□□□□ -1.05
APOB-201ENST00000233242 MTTPP55157 894 aa8.52□□□□□ -1.05
APOB-201ENST00000233242 SPDYAQ5MJ70 313 aa8.52□□□□□ -1.05
APOB-201ENST00000233242 ERMARDQ5T6L9 678 aa8.52□□□□□ -1.05
APOB-201ENST00000233242 TRIQKQ629K1 86 aa8.52□□□□□ -1.05
APOB-201ENST00000233242 CCDC149Q6ZUS6 474 aa8.52□□□□□ -1.05
APOB-201ENST00000233242 OR6Y1Q8NGX8 325 aa8.52□□□□□ -1.05
APOB-201ENST00000233242 PPP1R14BQ96C90 147 aa8.52□□□□□ -1.05
APOB-201ENST00000233242 ZBED2Q9BTP6 218 aa8.52□□□□□ -1.05
APOB-201ENST00000233242 EIF3LQ9Y262 564 aaKnown RBP8.52□□□□□ -1.05
APOB-201ENST00000233242 PSMC6P62333 389 aa8.51□□□□□ -1.05
APOB-201ENST00000233242 PRKAA1Q13131 559 aa8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 66.7 ms