RNA–Protein interactions for RNA: ENST00000225964.9

COL1A1-201, Transcript of collagen type I alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL1A1, Length 6,727 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-201ENST00000225964 A2ML1A8K2U0 1454 aa13.75□□□□□ -0.21
COL1A1-201ENST00000225964 CAMTA2O94983 1202 aa13.75□□□□□ -0.21
COL1A1-201ENST00000225964 KIAA2013Q8IYS2 634 aa13.75□□□□□ -0.21
COL1A1-201ENST00000225964 MAGED4Q96JG8 741 aa13.75□□□□□ -0.21
COL1A1-201ENST00000225964 RBBP8Q99708 897 aa13.75□□□□□ -0.21
COL1A1-201ENST00000225964 TMEM245Q9H330 911 aa13.75□□□□□ -0.21
COL1A1-201ENST00000225964 SCN3BQ9NY72 215 aa13.75□□□□□ -0.21
COL1A1-201ENST00000225964 PCDHB2Q9Y5E7 798 aa13.75□□□□□ -0.21
COL1A1-201ENST00000225964 P4HA2O15460 535 aa13.74□□□□□ -0.21
COL1A1-201ENST00000225964 RPS7P62081 194 aaKnown RBP13.74□□□□□ -0.21
COL1A1-201ENST00000225964 EFL1Q7Z2Z2 1120 aaKnown RBP13.74□□□□□ -0.21
COL1A1-201ENST00000225964 PRPF39Q86UA1 669 aaKnown RBP13.74□□□□□ -0.21
COL1A1-201ENST00000225964 RIN2Q8WYP3 895 aaPredicted RBP13.74□□□□□ -0.21
COL1A1-201ENST00000225964 KLF6Q99612 283 aaPredicted RBP13.74□□□□□ -0.21
COL1A1-201ENST00000225964 ECSITQ9BQ95 431 aa13.74□□□□□ -0.21
COL1A1-201ENST00000225964 FBXL21Q9UKT6 434 aa13.74□□□□□ -0.21
COL1A1-201ENST00000225964 HNRNPH2P55795 449 aaKnown RBP13.74□□□□□ -0.21
COL1A1-201ENST00000225964 SNRPFP62306 86 aaKnown RBP13.74□□□□□ -0.21
COL1A1-201ENST00000225964 C16orf72Q14CZ0 275 aa13.74□□□□□ -0.21
COL1A1-201ENST00000225964 CHP1Q99653 195 aa13.74□□□□□ -0.21
COL1A1-201ENST00000225964 CIPCQ9C0C6 399 aa13.74□□□□□ -0.21
COL1A1-201ENST00000225964 IGFLR1Q9H665 355 aa13.74□□□□□ -0.21
COL1A1-201ENST00000225964 PALMDQ9NP74 551 aa13.74□□□□□ -0.21
COL1A1-201ENST00000225964 CHORDC1Q9UHD1 332 aaPredicted RBP13.74□□□□□ -0.21
COL1A1-201ENST00000225964 ADAM21Q9UKJ8 722 aa13.74□□□□□ -0.21
COL1A1-201ENST00000225964 RUVBL2Q9Y230 463 aaKnown RBP13.74□□□□□ -0.21
COL1A1-201ENST00000225964 VPS9D1Q9Y2B5 631 aa13.74□□□□□ -0.21
COL1A1-201ENST00000225964 SPATA31A6Q5VVP1 1343 aa13.74□□□□□ -0.21
COL1A1-201ENST00000225964 RASA1P20936 1047 aa13.74□□□□□ -0.21
COL1A1-201ENST00000225964 ITGA8P53708 1063 aa13.74□□□□□ -0.21
COL1A1-201ENST00000225964 EFEMP1Q12805 493 aa13.74□□□□□ -0.21
COL1A1-201ENST00000225964 CACHD1Q5VU97 1274 aa13.74□□□□□ -0.21
COL1A1-201ENST00000225964 ERLEC1Q96DZ1 483 aa13.74□□□□□ -0.21
COL1A1-201ENST00000225964 CPA4Q9UI42 421 aa13.74□□□□□ -0.21
COL1A1-201ENST00000225964 ARL2BPQ9Y2Y0 163 aa13.74□□□□□ -0.21
COL1A1-201ENST00000225964 MTSS1O43312 755 aa13.74□□□□□ -0.21
COL1A1-201ENST00000225964 STRNO43815 780 aa13.74□□□□□ -0.21
COL1A1-201ENST00000225964 SNRPAP09012 282 aaKnown RBP13.74□□□□□ -0.21
COL1A1-201ENST00000225964 SRGNP10124 158 aa13.74□□□□□ -0.21
COL1A1-201ENST00000225964 ACO1P21399 889 aaKnown RBP13.74□□□□□ -0.21
COL1A1-201ENST00000225964 GRK3P35626 688 aa13.74□□□□□ -0.21
COL1A1-201ENST00000225964 MAGEA4P43358 317 aa13.74□□□□□ -0.21
COL1A1-201ENST00000225964 ANXA11P50995 505 aaKnown RBP13.74□□□□□ -0.21
COL1A1-201ENST00000225964 DNAL1Q4LDG9 190 aa13.74□□□□□ -0.21
COL1A1-201ENST00000225964 FGD2Q7Z6J4 655 aa13.74□□□□□ -0.21
COL1A1-201ENST00000225964 THTPAQ9BU02 230 aa13.74□□□□□ -0.21
COL1A1-201ENST00000225964 PLA2G12BQ9BX93 195 aa13.74□□□□□ -0.21
COL1A1-201ENST00000225964 RRAGCQ9HB90 399 aa13.74□□□□□ -0.21
COL1A1-201ENST00000225964 SNX12Q9UMY4 172 aa13.74□□□□□ -0.21
COL1A1-201ENST00000225964 LZTS1Q9Y250 596 aa13.74□□□□□ -0.21
COL1A1-201ENST00000225964 SPHKAPQ2M3C7 1700 aa13.74□□□□□ -0.21
COL1A1-201ENST00000225964 EPHX2P34913 555 aa13.74□□□□□ -0.21
COL1A1-201ENST00000225964 FAM83EQ2M2I3 478 aa13.74□□□□□ -0.21
COL1A1-201ENST00000225964 ACOT1Q86TX2 421 aa13.74□□□□□ -0.21
COL1A1-201ENST00000225964 ZNF677Q86XU0 584 aa13.74□□□□□ -0.21
COL1A1-201ENST00000225964 SGF29Q96ES7 293 aa13.74□□□□□ -0.21
COL1A1-201ENST00000225964 PAPOLBQ9NRJ5 636 aaKnown RBP13.74□□□□□ -0.21
COL1A1-201ENST00000225964 ANKEF1Q9NU02 776 aa13.74□□□□□ -0.21
COL1A1-201ENST00000225964 MPP6Q9NZW5 540 aa13.74□□□□□ -0.21
COL1A1-201ENST00000225964 CAND2O75155 1236 aa13.73□□□□□ -0.21
COL1A1-201ENST00000225964 VPS26AO75436 327 aa13.73□□□□□ -0.21
COL1A1-201ENST00000225964 PDIA6Q15084 440 aa13.73□□□□□ -0.21
COL1A1-201ENST00000225964 AASDHQ4L235 1098 aaPredicted RBP13.73□□□□□ -0.21
COL1A1-201ENST00000225964 APPL1Q9UKG1 709 aa13.73□□□□□ -0.21
COL1A1-201ENST00000225964 KLHL2O95198 593 aa13.73□□□□□ -0.21
COL1A1-201ENST00000225964 KRT20P35900 424 aa13.73□□□□□ -0.21
COL1A1-201ENST00000225964 RUNX1T1Q06455 604 aa13.73□□□□□ -0.21
COL1A1-201ENST00000225964 ZNF484Q5JVG2 852 aa13.73□□□□□ -0.21
COL1A1-201ENST00000225964 FAXCQ5TGI0 409 aa13.73□□□□□ -0.21
COL1A1-201ENST00000225964 CCDC81Q6ZN84 652 aa13.73□□□□□ -0.21
COL1A1-201ENST00000225964 STOX1Q6ZVD7 989 aa13.73□□□□□ -0.21
COL1A1-201ENST00000225964 VN1R5Q7Z5H4 357 aa13.73□□□□□ -0.21
COL1A1-201ENST00000225964 AGPAT5Q9NUQ2 364 aa13.73□□□□□ -0.21
COL1A1-201ENST00000225964 GEMIN8Q9NWZ8 242 aaKnown RBP13.73□□□□□ -0.21
COL1A1-201ENST00000225964 TUBE1Q9UJT0 475 aa13.73□□□□□ -0.21
COL1A1-201ENST00000225964 VPS28Q9UK41 221 aa13.73□□□□□ -0.21
COL1A1-201ENST00000225964 TULP4Q9NRJ4 1543 aa13.73□□□□□ -0.21
COL1A1-201ENST00000225964 DEAF1O75398 565 aaPredicted RBP13.73□□□□□ -0.21
COL1A1-201ENST00000225964 FYNP06241 537 aa13.73□□□□□ -0.21
COL1A1-201ENST00000225964 FDFT1P37268 417 aa13.73□□□□□ -0.21
COL1A1-201ENST00000225964 MAGEA9P43362 315 aa13.73□□□□□ -0.21
COL1A1-201ENST00000225964 SPATA31A1Q5TZJ5 1347 aa13.73□□□□□ -0.21
COL1A1-201ENST00000225964 IRAK1BP1Q5VVH5 260 aa13.73□□□□□ -0.21
COL1A1-201ENST00000225964 FAM136AQ96C01 138 aa13.73□□□□□ -0.21
COL1A1-201ENST00000225964 GPRASP2Q96D09 838 aa13.73□□□□□ -0.21
COL1A1-201ENST00000225964 RIT2Q99578 217 aa13.73□□□□□ -0.21
COL1A1-201ENST00000225964 TRIM10Q9UDY6 481 aa13.73□□□□□ -0.21
COL1A1-201ENST00000225964 CASTOR2A6NHX0 329 aa13.73□□□□□ -0.21
COL1A1-201ENST00000225964 SPTLC1O15269 473 aa13.73□□□□□ -0.21
COL1A1-201ENST00000225964 RHOCP08134 193 aa13.73□□□□□ -0.21
COL1A1-201ENST00000225964 TGM2P21980 687 aa13.73□□□□□ -0.21
COL1A1-201ENST00000225964 CUL2Q13617 745 aa13.73□□□□□ -0.21
COL1A1-201ENST00000225964 NAB2Q15742 525 aa13.73□□□□□ -0.21
COL1A1-201ENST00000225964 TIGD7Q6NT04 549 aaPredicted RBP13.73□□□□□ -0.21
COL1A1-201ENST00000225964 RINLQ6ZS11 566 aa13.73□□□□□ -0.21
COL1A1-201ENST00000225964 UNC45BQ8IWX7 931 aa13.73□□□□□ -0.21
COL1A1-201ENST00000225964 PPIL6Q8IXY8 311 aa13.73□□□□□ -0.21
COL1A1-201ENST00000225964 MTMR12Q9C0I1 747 aa13.73□□□□□ -0.21
COL1A1-201ENST00000225964 GRID1Q9ULK0 1009 aa13.73□□□□□ -0.21
COL1A1-201ENST00000225964 ZNF286BP0CG31 522 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 186 ms