RNA–Protein interactions for RNA: YER021W

RPN3, Transcript of Essential non-ATPase regulatory subunit of the 26S proteasome lid, yeastyeast

Gene RPN3, Length 1,572 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPN3YER021W AHC2P25649 128 aa1.64□□□□□ -2.15
RPN3YER021W SCM4P32564 187 aa1.64□□□□□ -2.15
RPN3YER021W YBL071CP38185 102 aa1.64□□□□□ -2.15
RPN3YER021W YER135CP40082 130 aa1.64□□□□□ -2.15
RPN3YER021W PAM16P42949 149 aa1.64□□□□□ -2.15
RPN3YER021W YLR179CQ06252 201 aaKnown RBP1.64□□□□□ -2.15
RPN3YER021W YLR099W-AQ3E798 87 aa1.64□□□□□ -2.15
RPN3YER021W YKL068W-AQ3E826 78 aa1.64□□□□□ -2.15
RPN3YER021W HUG1Q6Q5K6 68 aa1.64□□□□□ -2.15
RPN3YER021W URA6P15700 204 aa1.64□□□□□ -2.15
RPN3YER021W SEN2P16658 377 aa1.64□□□□□ -2.15
RPN3YER021W HOM6P31116 359 aaKnown RBP1.64□□□□□ -2.15
RPN3YER021W COS8P38723 381 aa1.64□□□□□ -2.15
RPN3YER021W OST2P46964 130 aa1.64□□□□□ -2.15
RPN3YER021W YGL258W-AQ3E740 77 aa1.64□□□□□ -2.15
RPN3YER021W YHR086W-AQ3E746 53 aa1.64□□□□□ -2.15
RPN3YER021W ODC2Q99297 307 aa1.64□□□□□ -2.15
RPN3YER021W RTC6O14464 93 aa1.63□□□□□ -2.15
RPN3YER021W RTC3P38804 111 aaPredicted RBP1.63□□□□□ -2.15
RPN3YER021W SMD3P43321 101 aaKnown RBP1.63□□□□□ -2.15
RPN3YER021W DOC1P53068 250 aa1.63□□□□□ -2.15
RPN3YER021W MMS2P53152 137 aa1.63□□□□□ -2.15
RPN3YER021W UBC7Q02159 165 aa1.63□□□□□ -2.15
RPN3YER021W LCL1Q02786 101 aa1.63□□□□□ -2.15
RPN3YER021W SNO1Q03144 224 aa1.63□□□□□ -2.15
RPN3YER021W SDO1Q07953 250 aaKnown RBP1.63□□□□□ -2.15
RPN3YER021W PUT1P09368 476 aa1.62□□□□□ -2.15
RPN3YER021W TRR1P29509 319 aaKnown RBP1.62□□□□□ -2.15
RPN3YER021W GOS1P38736 223 aa1.62□□□□□ -2.15
RPN3YER021W NVJ1P38881 321 aa1.62□□□□□ -2.15
RPN3YER021W ARP3P47117 449 aaKnown RBP1.62□□□□□ -2.15
RPN3YER021W YGR025WP53216 100 aa1.62□□□□□ -2.15
RPN3YER021W GRX5Q02784 150 aa1.62□□□□□ -2.15
RPN3YER021W SDH7Q04401 133 aa1.62□□□□□ -2.15
RPN3YER021W YDR010CQ12426 110 aa1.62□□□□□ -2.15
RPN3YER021W YGR240C-AQ3E786 66 aa1.62□□□□□ -2.15
RPN3YER021W NSA2P40078 261 aaKnown RBP1.61□□□□□ -2.15
RPN3YER021W DYN2Q02647 92 aa1.61□□□□□ -2.15
RPN3YER021W THI74Q04083 370 aa1.61□□□□□ -2.15
RPN3YER021W YLR307C-AQ3E825 87 aa1.61□□□□□ -2.15
RPN3YER021W EMC5P40540 141 aa1.6□□□□□ -2.15
RPN3YER021W MSS2P40990 351 aa1.6□□□□□ -2.15
RPN3YER021W BNA6P43619 295 aa1.6□□□□□ -2.15
RPN3YER021W EST3Q03096 181 aa1.6□□□□□ -2.15
RPN3YER021W YLL066W-BQ8TGJ7 56 aa1.6□□□□□ -2.15
RPN3YER021W Q0255P03881 472 aa1.59□□□□□ -2.15
RPN3YER021W CDC7P06243 507 aa1.59□□□□□ -2.15
RPN3YER021W YHR032W-AP0C5N6 59 aa1.59□□□□□ -2.15
RPN3YER021W YHR213WP0CI67 198 aa1.59□□□□□ -2.15
RPN3YER021W DDR48P18899 430 aaKnown RBP1.59□□□□□ -2.15
RPN3YER021W MSA2P36157 363 aa1.59□□□□□ -2.15
RPN3YER021W SVP26P38869 228 aa1.59□□□□□ -2.15
RPN3YER021W ARC15P40518 154 aaRIP-Chip data1.59□□□□□ -2.15not detected
RPN3YER021W OTU1P43558 301 aa1.59□□□□□ -2.15
RPN3YER021W IMP2P46972 177 aa1.59□□□□□ -2.15
RPN3YER021W SPC24Q04477 213 aa1.59□□□□□ -2.15
RPN3YER021W PAM18Q07914 168 aa1.59□□□□□ -2.15
RPN3YER021W CSM4Q08955 156 aa1.59□□□□□ -2.15
RPN3YER021W CCW12Q12127 133 aa1.59□□□□□ -2.15
RPN3YER021W URA5P13298 226 aaKnown RBP1.59□□□□□ -2.16
RPN3YER021W HYP2P23301 157 aaKnown RBP1.59□□□□□ -2.16
RPN3YER021W YHR022CP38763 256 aa1.59□□□□□ -2.16
RPN3YER021W GLE2P40066 365 aa1.59□□□□□ -2.16
RPN3YER021W YAE1P47118 141 aaPredicted RBP1.59□□□□□ -2.16
RPN3YER021W ORM1P53224 222 aa1.59□□□□□ -2.16
RPN3YER021W YGR050CP53231 118 aa1.59□□□□□ -2.16
RPN3YER021W FRQ1Q06389 190 aa1.59□□□□□ -2.16
RPN3YER021W PET20Q99373 253 aa1.59□□□□□ -2.16
RPN3YER021W RPB3P16370 318 aaKnown RBP1.58□□□□□ -2.16
RPN3YER021W YBR013CP38215 129 aa1.58□□□□□ -2.16
RPN3YER021W YHR125WP38831 101 aa1.58□□□□□ -2.16
RPN3YER021W YOL160WQ08321 113 aa1.58□□□□□ -2.16
RPN3YER021W YCT1Q12235 531 aa1.58□□□□□ -2.16
RPN3YER021W YPR145C-AQ2V2P0 78 aa1.58□□□□□ -2.16
RPN3YER021W CMC2Q3E7A4 109 aa1.58□□□□□ -2.16
RPN3YER021W RRT15Q3E811 62 aa1.58□□□□□ -2.16
RPN3YER021W YAR023CD6VPM8 179 aa1.57□□□□□ -2.16
RPN3YER021W FPR2P32472 135 aa1.57□□□□□ -2.16
RPN3YER021W EMP24P32803 203 aaKnown RBP1.57□□□□□ -2.16
RPN3YER021W CSH1P38287 376 aa1.57□□□□□ -2.16
RPN3YER021W EGD2P38879 174 aaKnown RBP1.57□□□□□ -2.16
RPN3YER021W MRPS17Q03246 237 aaPredicted RBP1.57□□□□□ -2.16
RPN3YER021W SCP1Q08873 200 aa1.57□□□□□ -2.16
RPN3YER021W YPR010C-AA5Z2X5 72 aa1.56□□□□□ -2.16
RPN3YER021W RPL33AP05744 107 aaKnown RBP1.56□□□□□ -2.16
RPN3YER021W YCR016WP25617 290 aaKnown RBP1.56□□□□□ -2.16
RPN3YER021W ERV15P38312 142 aa1.56□□□□□ -2.16
RPN3YER021W RPL33BP41056 107 aaKnown RBP1.56□□□□□ -2.16
RPN3YER021W YLR031WQ07978 186 aa1.56□□□□□ -2.16
RPN3YER021W ATG41Q12048 136 aa1.56□□□□□ -2.16
RPN3YER021W TIR1P10863 254 aa1.55□□□□□ -2.16
RPN3YER021W MRP17P28778 131 aa1.55□□□□□ -2.16
RPN3YER021W ACP1P32463 125 aa1.55□□□□□ -2.16
RPN3YER021W SFT2P38166 215 aa1.55□□□□□ -2.16
RPN3YER021W HTD2P38790 280 aaKnown RBP1.55□□□□□ -2.16
RPN3YER021W YNL217WP40152 326 aa1.55□□□□□ -2.16
RPN3YER021W GVP36P40531 326 aaKnown RBP1.55□□□□□ -2.16
RPN3YER021W YGR026WP53217 278 aa1.55□□□□□ -2.16
RPN3YER021W ERI1P62651 68 aaKnown RBP1.55□□□□□ -2.16
RPN3YER021W DAD3P69850 94 aa1.55□□□□□ -2.16
Retrieved 100 of 5,963 RNA–protein pairs in 25.1 ms