RNA–Protein interactions for RNA: YER008C

SEC3, Transcript of Subunit of the exocyst complex, yeastyeast

Gene SEC3, Length 4,011 nt, Biotype protein coding, Subcellular localisation Cellular bud .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SEC3YER008C YET1P35723 206 aa0.79□□□□□ -2.28
SEC3YER008C NSA2P40078 261 aaKnown RBP0.79□□□□□ -2.28
SEC3YER008C RIO2P40160 425 aaKnown RBP0.79□□□□□ -2.28
SEC3YER008C MIC19P43594 170 aa0.79□□□□□ -2.28
SEC3YER008C FIT2Q08906 153 aa0.79□□□□□ -2.28
SEC3YER008C BUD23P25627 275 aaPredicted RBP0.78□□□□□ -2.28
SEC3YER008C YBL010CP32788 280 aa0.78□□□□□ -2.28
SEC3YER008C YKR045CP36138 183 aa0.78□□□□□ -2.28
SEC3YER008C YER135CP40082 130 aa0.78□□□□□ -2.28
SEC3YER008C VPS28Q02767 242 aa0.78□□□□□ -2.28
SEC3YER008C ARL3Q02804 198 aa0.78□□□□□ -2.28
SEC3YER008C YPR114WQ06107 315 aa0.78□□□□□ -2.28
SEC3YER008C YPD1Q07688 167 aa0.78□□□□□ -2.28
SEC3YER008C YOR385WQ08909 290 aa0.78□□□□□ -2.28
SEC3YER008C YPR096CO13587 100 aa0.78□□□□□ -2.28
SEC3YER008C MSW1P04803 379 aa0.78□□□□□ -2.28
SEC3YER008C CBP6P07253 162 aaPredicted RBP0.78□□□□□ -2.28
SEC3YER008C CUP9P41817 306 aa0.78□□□□□ -2.28
SEC3YER008C BOL2P53082 120 aa0.78□□□□□ -2.28
SEC3YER008C YPR063CQ12160 140 aa0.78□□□□□ -2.28
SEC3YER008C CMC4Q3E7A9 73 aa0.78□□□□□ -2.28
SEC3YER008C KIN28P06242 306 aa0.78□□□□□ -2.29
SEC3YER008C DDR48P18899 430 aaKnown RBP0.78□□□□□ -2.29
SEC3YER008C YOR062CP36025 268 aa0.78□□□□□ -2.29
SEC3YER008C YDR102CQ03864 110 aa0.78□□□□□ -2.29
SEC3YER008C NKP2Q06162 153 aa0.78□□□□□ -2.29
SEC3YER008C PRP11Q07350 266 aaPredicted RBP0.78□□□□□ -2.29
SEC3YER008C RAD6P06104 172 aa0.77□□□□□ -2.29
SEC3YER008C TFC1P32367 649 aa0.77□□□□□ -2.29
SEC3YER008C YNL217WP40152 326 aa0.77□□□□□ -2.29
SEC3YER008C GEP7P53171 287 aa0.77□□□□□ -2.29
SEC3YER008C SDH7Q04401 133 aa0.77□□□□□ -2.29
SEC3YER008C RPL22AP05749 121 aaKnown RBP0.77□□□□□ -2.29
SEC3YER008C SHE2P36068 246 aaKnown RBP RIP-Chip data0.77□□□□□ -2.29not detected
SEC3YER008C SDH4P37298 181 aa0.77□□□□□ -2.29
SEC3YER008C YER134CP40081 178 aa0.77□□□□□ -2.29
SEC3YER008C DID2P69771 204 aa0.77□□□□□ -2.29
SEC3YER008C ODC2Q99297 307 aa0.77□□□□□ -2.29
SEC3YER008C HSP150P32478 413 aa0.77□□□□□ -2.29
SEC3YER008C HYR1P40581 163 aaKnown RBP0.77□□□□□ -2.29
SEC3YER008C ALB1P47019 175 aaPredicted RBP0.77□□□□□ -2.29
SEC3YER008C YNL019CP53975 284 aa0.77□□□□□ -2.29
SEC3YER008C YDR366CP87287 132 aa0.77□□□□□ -2.29
SEC3YER008C PIR1Q03178 341 aa0.77□□□□□ -2.29
SEC3YER008C MZM1Q03429 123 aaPredicted RBP0.77□□□□□ -2.29
SEC3YER008C RUB1Q03919 77 aa0.77□□□□□ -2.29
SEC3YER008C YLR236CA0A023PZG4 107 aa0.76□□□□□ -2.29
SEC3YER008C COX5BP00425 151 aa0.76□□□□□ -2.29
SEC3YER008C ADH3P07246 375 aaKnown RBP0.76□□□□□ -2.29
SEC3YER008C MRP49P32388 137 aa0.76□□□□□ -2.29
SEC3YER008C CIS3P47001 227 aa0.76□□□□□ -2.29
SEC3YER008C DOC1P53068 250 aa0.76□□□□□ -2.29
SEC3YER008C LIP1Q03579 150 aa0.76□□□□□ -2.29
SEC3YER008C MRPS8Q03799 155 aa0.76□□□□□ -2.29
SEC3YER008C YDR391CQ04170 232 aa0.76□□□□□ -2.29
SEC3YER008C ELP6Q04868 273 aa0.76□□□□□ -2.29
SEC3YER008C HUT1Q12520 339 aa0.76□□□□□ -2.29
SEC3YER008C NMT1P14743 455 aa0.76□□□□□ -2.29
SEC3YER008C YCR050CP25630 102 aa0.76□□□□□ -2.29
SEC3YER008C EMP24P32803 203 aaKnown RBP0.76□□□□□ -2.29
SEC3YER008C SFT2P38166 215 aa0.76□□□□□ -2.29
SEC3YER008C MPM1P40364 252 aa0.76□□□□□ -2.29
SEC3YER008C PHS1P40857 217 aa0.76□□□□□ -2.29
SEC3YER008C YFR035CP43608 114 aa0.76□□□□□ -2.29
SEC3YER008C YNR064CP53750 290 aa0.76□□□□□ -2.29
SEC3YER008C YMR295CQ03559 197 aa0.76□□□□□ -2.29
SEC3YER008C MIX17Q03667 156 aa0.76□□□□□ -2.29
SEC3YER008C RAD28Q12021 506 aa0.76□□□□□ -2.29
SEC3YER008C YPR013CQ12145 317 aa0.76□□□□□ -2.29
SEC3YER008C HAP3P13434 144 aa0.76□□□□□ -2.29
SEC3YER008C HSP12P22943 109 aaKnown RBP0.76□□□□□ -2.29
SEC3YER008C MIG1P27705 504 aa0.76□□□□□ -2.29
SEC3YER008C UMP1P38293 148 aa0.76□□□□□ -2.29
SEC3YER008C YHL042WP38729 150 aa0.76□□□□□ -2.29
SEC3YER008C YAL064WP39711 94 aa0.76□□□□□ -2.29
SEC3YER008C KNH1P50112 268 aa0.76□□□□□ -2.29
SEC3YER008C TIM13P53299 105 aa0.76□□□□□ -2.29
SEC3YER008C RSM27P53305 110 aa0.76□□□□□ -2.29
SEC3YER008C YML108WQ03759 105 aa0.76□□□□□ -2.29
SEC3YER008C UPS3Q04006 179 aa0.76□□□□□ -2.29
SEC3YER008C TVP18Q04767 167 aa0.76□□□□□ -2.29
SEC3YER008C OCA6Q12454 224 aa0.76□□□□□ -2.29
SEC3YER008C RTC6O14464 93 aa0.75□□□□□ -2.29
SEC3YER008C SOD1P00445 154 aaKnown RBP0.75□□□□□ -2.29
SEC3YER008C COX8P04039 78 aa0.75□□□□□ -2.29
SEC3YER008C SHB17P36136 271 aaKnown RBP0.75□□□□□ -2.29
SEC3YER008C YHL018WP38744 120 aaPredicted RBP0.75□□□□□ -2.29
SEC3YER008C YGL230CP53074 147 aa0.75□□□□□ -2.29
SEC3YER008C YLR042CQ07990 161 aa0.75□□□□□ -2.29
SEC3YER008C YOR015WQ12169 119 aa0.75□□□□□ -2.29
SEC3YER008C YLR412C-AQ3E742 68 aa0.75□□□□□ -2.29
SEC3YER008C DDP1Q99321 188 aaKnown RBP0.75□□□□□ -2.29
SEC3YER008C ACC1Q00955 2233 aaKnown RBP0.75□□□□□ -2.29
SEC3YER008C GPA2P10823 449 aa0.75□□□□□ -2.29
SEC3YER008C RPL33BP41056 107 aaKnown RBP0.75□□□□□ -2.29
SEC3YER008C EMC4P53073 190 aa0.75□□□□□ -2.29
SEC3YER008C YGR017WP53210 297 aa0.75□□□□□ -2.29
SEC3YER008C RCE1Q03530 315 aa0.75□□□□□ -2.29
SEC3YER008C ATG41Q12048 136 aa0.75□□□□□ -2.29
SEC3YER008C YHR086W-AQ3E746 53 aa0.75□□□□□ -2.29
Retrieved 100 of 5,963 RNA–protein pairs in 50.4 ms