RNA–Protein interactions for RNA: YBL031W

SHE1, Transcript of Mitotic spindle protein, yeast

Gene SHE1, Length 1,017 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SHE1	YBL031W	PAU16	P35994	123 aa		3.38	□□□□□ -1.87
SHE1	YBL031W	PRS4	P38063	326 aa	Predicted RBP	3.38	□□□□□ -1.87
SHE1	YBL031W	DOG1	P38774	246 aa		3.38	□□□□□ -1.87
SHE1	YBL031W	PEX22	P39718	180 aa		3.38	□□□□□ -1.87
SHE1	YBL031W	YJR015W	P47090	510 aa		3.38	□□□□□ -1.87
SHE1	YBL031W	CPD1	P53314	239 aa		3.38	□□□□□ -1.87
SHE1	YBL031W	HAL1	Q01766	294 aa		3.38	□□□□□ -1.87
SHE1	YBL031W	RPL21A	Q02753	160 aa	Known RBP	3.38	□□□□□ -1.87
SHE1	YBL031W	YPL080C	Q02826	108 aa		3.38	□□□□□ -1.87
SHE1	YBL031W	GIM5	Q04493	163 aa		3.38	□□□□□ -1.87
SHE1	YBL031W	NAT3	Q06504	195 aa		3.38	□□□□□ -1.87
SHE1	YBL031W	YLR050C	Q12155	161 aa	Known RBP	3.38	□□□□□ -1.87
SHE1	YBL031W	RFM1	Q12192	310 aa		3.38	□□□□□ -1.87
SHE1	YBL031W	MRPL23	Q12487	163 aa	Predicted RBP	3.38	□□□□□ -1.87
SHE1	YBL031W	RPL21B	Q12672	160 aa	Known RBP	3.38	□□□□□ -1.87
SHE1	YBL031W	FOL3	Q12676	427 aa	Predicted RBP	3.38	□□□□□ -1.87
SHE1	YBL031W	YOR192C-C	Q3E736	78 aa		3.38	□□□□□ -1.87
SHE1	YBL031W	YIL134C-A	Q45U18	67 aa		3.38	□□□□□ -1.87
SHE1	YBL031W	MRS1	P07266	363 aa		3.37	□□□□□ -1.87
SHE1	YBL031W	MRS4	P23500	304 aa		3.37	□□□□□ -1.87
SHE1	YBL031W	ZRT1	P32804	376 aa		3.37	□□□□□ -1.87
SHE1	YBL031W	PAU7	P39545	55 aa		3.37	□□□□□ -1.87
SHE1	YBL031W	GON7	P46984	123 aa		3.37	□□□□□ -1.87
SHE1	YBL031W	YPS5	P53057	165 aa		3.37	□□□□□ -1.87
SHE1	YBL031W	YML079W	Q03629	201 aa		3.37	□□□□□ -1.87
SHE1	YBL031W	YMR007W	Q03675	126 aa		3.37	□□□□□ -1.87
SHE1	YBL031W	UPS3	Q04006	179 aa		3.37	□□□□□ -1.87
SHE1	YBL031W	PAU23	Q07987	124 aa		3.37	□□□□□ -1.87
SHE1	YBL031W	PAU17	Q12370	124 aa		3.37	□□□□□ -1.87
SHE1	YBL031W	YOS1	Q3E834	85 aa		3.37	□□□□□ -1.87
SHE1	YBL031W	POR1	P04840	283 aa	Known RBP	3.36	□□□□□ -1.87
SHE1	YBL031W	DDI2	P0CH63	225 aa		3.36	□□□□□ -1.87
SHE1	YBL031W	DDI3	P0CH64	225 aa		3.36	□□□□□ -1.87
SHE1	YBL031W	FYV4	P38783	130 aa	Predicted RBP	3.36	□□□□□ -1.87
SHE1	YBL031W	TEM1	P38987	245 aa		3.36	□□□□□ -1.87
SHE1	YBL031W	SEC72	P39742	193 aa	Known RBP	3.36	□□□□□ -1.87
SHE1	YBL031W	HIT1	P46973	164 aa		3.36	□□□□□ -1.87
SHE1	YBL031W	YDR115W	Q04598	105 aa		3.36	□□□□□ -1.87
SHE1	YBL031W	TVP18	Q04767	167 aa		3.36	□□□□□ -1.87
SHE1	YBL031W	YCL001W-B	Q96VH2	84 aa		3.36	□□□□□ -1.87
SHE1	YBL031W	TAO3	P40468	2376 aa		3.36	□□□□□ -1.87
SHE1	YBL031W	SAL1	D6W196	494 aa		3.35	□□□□□ -1.87
SHE1	YBL031W	SOD1	P00445	154 aa	Known RBP	3.35	□□□□□ -1.87
SHE1	YBL031W	YBR220C	P38318	560 aa		3.35	□□□□□ -1.87
SHE1	YBL031W	YHL037C	P38733	133 aa		3.35	□□□□□ -1.87
SHE1	YBL031W	DOG2	P38773	246 aa		3.35	□□□□□ -1.87
SHE1	YBL031W	SRP14	P38985	146 aa		3.35	□□□□□ -1.87
SHE1	YBL031W	BDH1	P39714	382 aa		3.35	□□□□□ -1.87
SHE1	YBL031W	DYN2	Q02647	92 aa		3.35	□□□□□ -1.87
SHE1	YBL031W	YOL118C	Q08259	102 aa		3.35	□□□□□ -1.87
SHE1	YBL031W	POC4	Q12245	148 aa	Predicted RBP	3.35	□□□□□ -1.87
SHE1	YBL031W	MRP49	P32388	137 aa		3.34	□□□□□ -1.87
SHE1	YBL031W	SFT2	P38166	215 aa		3.34	□□□□□ -1.87
SHE1	YBL031W	RRT1	P38192	103 aa		3.34	□□□□□ -1.87
SHE1	YBL031W	YHL044W	P38727	235 aa		3.34	□□□□□ -1.87
SHE1	YBL031W	DSK2	P48510	373 aa		3.34	□□□□□ -1.87
SHE1	YBL031W	HST4	P53688	370 aa		3.34	□□□□□ -1.87
SHE1	YBL031W	PBP4	Q07362	185 aa	Known RBP	3.34	□□□□□ -1.87
SHE1	YBL031W	CSM4	Q08955	156 aa		3.34	□□□□□ -1.87
SHE1	YBL031W	YPL162C	Q12042	273 aa		3.34	□□□□□ -1.87
SHE1	YBL031W	PHO85	P17157	305 aa		3.33	□□□□□ -1.88
SHE1	YBL031W	YKL070W	P36087	169 aa		3.33	□□□□□ -1.88
SHE1	YBL031W	ADH6	Q04894	360 aa	Known RBP	3.33	□□□□□ -1.88
SHE1	YBL031W	FIT2	Q08906	153 aa		3.33	□□□□□ -1.88
SHE1	YBL031W	DAD1	Q12248	94 aa		3.33	□□□□□ -1.88
SHE1	YBL031W	GEP5	Q12393	293 aa		3.33	□□□□□ -1.88
SHE1	YBL031W	RPL27A	P0C2H6	136 aa	Known RBP	3.32	□□□□□ -1.88
SHE1	YBL031W	ANB1	P19211	157 aa		3.32	□□□□□ -1.88
SHE1	YBL031W	RPL16B	P26785	198 aa	Known RBP	3.32	□□□□□ -1.88
SHE1	YBL031W	PIR5	P46999	287 aa		3.32	□□□□□ -1.88
SHE1	YBL031W	TDA4	P47153	279 aa		3.32	□□□□□ -1.88
SHE1	YBL031W	THG1	P53215	237 aa	Known RBP	3.32	□□□□□ -1.88
SHE1	YBL031W	UBC7	Q02159	165 aa		3.32	□□□□□ -1.88
SHE1	YBL031W	SEN15	Q04675	128 aa		3.32	□□□□□ -1.88
SHE1	YBL031W	ARC18	Q05933	178 aa	Known RBP	3.32	□□□□□ -1.88
SHE1	YBL031W	WIP1	Q2V2P8	89 aa		3.32	□□□□□ -1.88
SHE1	YBL031W	YMR316C-A	I2HB70	103 aa		3.31	□□□□□ -1.88
SHE1	YBL031W	SPS100	P13130	326 aa		3.31	□□□□□ -1.88
SHE1	YBL031W	CUP2	P15315	225 aa		3.31	□□□□□ -1.88
SHE1	YBL031W	CPT1	P17898	393 aa		3.31	□□□□□ -1.88
SHE1	YBL031W	LST8	P41318	303 aa		3.31	□□□□□ -1.88
SHE1	YBL031W	YFR045W	P43617	309 aa		3.31	□□□□□ -1.88
SHE1	YBL031W	SBH2	P52871	88 aa		3.31	□□□□□ -1.88
SHE1	YBL031W	MIX17	Q03667	156 aa		3.31	□□□□□ -1.88
SHE1	YBL031W	GRH1	Q04410	372 aa	Known RBP	3.31	□□□□□ -1.88
SHE1	YBL031W	NAT5	Q08689	176 aa		3.31	□□□□□ -1.88
SHE1	YBL031W	YLR342W-A	Q3E810	57 aa		3.31	□□□□□ -1.88
SHE1	YBL031W	YPR014C	Q6B0W2	109 aa		3.31	□□□□□ -1.88
SHE1	YBL031W	YMR105W-A	Q8TGS8	64 aa		3.31	□□□□□ -1.88
SHE1	YBL031W	CCH1	P50077	2039 aa		3.31	□□□□□ -1.88
SHE1	YBL031W	RPL27B	P0C2H7	136 aa	Known RBP	3.3	□□□□□ -1.88
SHE1	YBL031W	MRPL31	P14063	131 aa	Predicted RBP	3.3	□□□□□ -1.88
SHE1	YBL031W	INO2	P26798	304 aa		3.3	□□□□□ -1.88
SHE1	YBL031W	UTR5	P32630	166 aa		3.3	□□□□□ -1.88
SHE1	YBL031W	GSP1	P32835	219 aa	Known RBP	3.3	□□□□□ -1.88
SHE1	YBL031W	GSP2	P32836	220 aa	Known RBP	3.3	□□□□□ -1.88
SHE1	YBL031W	APS1	P35181	156 aa		3.3	□□□□□ -1.88
SHE1	YBL031W	YKL044W	P36092	106 aa		3.3	□□□□□ -1.88
SHE1	YBL031W	YGP1	P38616	354 aa	Known RBP	3.3	□□□□□ -1.88
SHE1	YBL031W	YER121W	P40076	114 aa		3.3	□□□□□ -1.88

Retrieved 100 of 5,963 RNA–protein pairs in 72.2 ms