RNA–Protein interactions for RNA: ENST00000641247.1

PHGDH-212, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 710 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-212ENST00000641247 ST3GAL1Q11201 340 aa10.51□□□□□ -0.73
PHGDH-212ENST00000641247 PDGFRLQ15198 375 aa10.51□□□□□ -0.73
PHGDH-212ENST00000641247 ZNF77Q15935 545 aa10.51□□□□□ -0.73
PHGDH-212ENST00000641247 LYSMD4Q5XG99 296 aa10.51□□□□□ -0.73
PHGDH-212ENST00000641247 LARP1BQ659C4 914 aaKnown RBP10.51□□□□□ -0.73
PHGDH-212ENST00000641247 CC2D1AQ6P1N0 951 aaPredicted RBP10.51□□□□□ -0.73
PHGDH-212ENST00000641247 MPZL3Q6UWV2 235 aa10.51□□□□□ -0.73
PHGDH-212ENST00000641247 MON1AQ86VX9 555 aa10.51□□□□□ -0.73
PHGDH-212ENST00000641247 HDDC3Q8N4P3 179 aa10.51□□□□□ -0.73
PHGDH-212ENST00000641247 MINDY1Q8N5J2 469 aa10.51□□□□□ -0.73
PHGDH-212ENST00000641247 ALLCQ8N6M5 410 aa10.51□□□□□ -0.73
PHGDH-212ENST00000641247 TTC16Q8NEE8 873 aa10.51□□□□□ -0.73
PHGDH-212ENST00000641247 IFT74Q96LB3 600 aa10.51□□□□□ -0.73
PHGDH-212ENST00000641247 SENP8Q96LD8 212 aa10.51□□□□□ -0.73
PHGDH-212ENST00000641247 OXCT2Q9BYC2 517 aaPredicted RBP10.51□□□□□ -0.73
PHGDH-212ENST00000641247 MRPL4Q9BYD3 311 aaKnown RBP10.51□□□□□ -0.73
PHGDH-212ENST00000641247 BHMT2Q9H2M3 363 aa10.51□□□□□ -0.73
PHGDH-212ENST00000641247 SCUBE2Q9NQ36 999 aa10.51□□□□□ -0.73
PHGDH-212ENST00000641247 HSFX1Q9UBD0 423 aa10.51□□□□□ -0.73
PHGDH-212ENST00000641247 MMP17Q9ULZ9 603 aa10.51□□□□□ -0.73
PHGDH-212ENST00000641247 SLC6A14Q9UN76 642 aa10.51□□□□□ -0.73
PHGDH-212ENST00000641247 SMC3Q9UQE7 1217 aa10.51□□□□□ -0.73
PHGDH-212ENST00000641247 HELZ2Q9BYK8 2649 aaKnown RBP10.51□□□□□ -0.73
PHGDH-212ENST00000641247 TTC26A0AVF1 554 aa10.5□□□□□ -0.73
PHGDH-212ENST00000641247 EIF4E1BA6NMX2 242 aaKnown RBP10.5□□□□□ -0.73
PHGDH-212ENST00000641247 LACTBL1A8MY62 500 aa10.5□□□□□ -0.73
PHGDH-212ENST00000641247 MAP3K13O43283 966 aa10.5□□□□□ -0.73
PHGDH-212ENST00000641247 NEMFO60524 1076 aa10.5□□□□□ -0.73
PHGDH-212ENST00000641247 OPHN1O60890 802 aa10.5□□□□□ -0.73
PHGDH-212ENST00000641247 ADAM23O75077 832 aa10.5□□□□□ -0.73
PHGDH-212ENST00000641247 KRT2P35908 639 aa10.5□□□□□ -0.73
PHGDH-212ENST00000641247 NUCB2P80303 420 aa10.5□□□□□ -0.73
PHGDH-212ENST00000641247 MAPK7Q13164 816 aa10.5□□□□□ -0.73
PHGDH-212ENST00000641247 ZNF268Q14587 947 aaPredicted RBP10.5□□□□□ -0.73
PHGDH-212ENST00000641247 ARMCX5Q6P1M9 558 aa10.5□□□□□ -0.73
PHGDH-212ENST00000641247 APBB1IPQ7Z5R6 666 aaPredicted RBP10.5□□□□□ -0.73
PHGDH-212ENST00000641247 EFCAB13Q8IY85 973 aa10.5□□□□□ -0.73
PHGDH-212ENST00000641247 CPA6Q8N4T0 437 aa10.5□□□□□ -0.73
PHGDH-212ENST00000641247 IL17RCQ8NAC3 791 aa10.5□□□□□ -0.73
PHGDH-212ENST00000641247 TXNDC5Q8NBS9 432 aaKnown RBP10.5□□□□□ -0.73
PHGDH-212ENST00000641247 LLPHQ9BRT6 129 aaKnown RBP10.5□□□□□ -0.73
PHGDH-212ENST00000641247 DNAAF2Q9NVR5 837 aaKnown RBP10.5□□□□□ -0.73
PHGDH-212ENST00000641247 MAGED2Q9UNF1 606 aaPredicted RBP10.5□□□□□ -0.73
PHGDH-212ENST00000641247 PHLPP2Q6ZVD8 1323 aa10.5□□□□□ -0.73
PHGDH-212ENST00000641247 TRIP11Q15643 1979 aa10.5□□□□□ -0.73
PHGDH-212ENST00000641247 NUP210Q8TEM1 1887 aaPredicted RBP10.49□□□□□ -0.73
PHGDH-212ENST00000641247 ESPNB1AK53 854 aa10.49□□□□□ -0.73
PHGDH-212ENST00000641247 ARHGAP33O14559 1287 aa10.49□□□□□ -0.73
PHGDH-212ENST00000641247 SLC16A4O15374 487 aa10.49□□□□□ -0.73
PHGDH-212ENST00000641247 CBFA2T3O75081 653 aa10.49□□□□□ -0.73
PHGDH-212ENST00000641247 SERPINF2P08697 491 aa10.49□□□□□ -0.73
PHGDH-212ENST00000641247 PLA2G2AP14555 144 aa10.49□□□□□ -0.73
PHGDH-212ENST00000641247 CYP3A5P20815 502 aa10.49□□□□□ -0.73
PHGDH-212ENST00000641247 RDXP35241 583 aaKnown RBP10.49□□□□□ -0.73
PHGDH-212ENST00000641247 ATXN3P54252 364 aaPredicted RBP10.49□□□□□ -0.73
PHGDH-212ENST00000641247 FAM160A1Q05DH4 1040 aa10.49□□□□□ -0.73
PHGDH-212ENST00000641247 GFPT1Q06210 699 aaPredicted RBP10.49□□□□□ -0.73
PHGDH-212ENST00000641247 CYP4F3Q08477 520 aa10.49□□□□□ -0.73
PHGDH-212ENST00000641247 C19orf57Q0VDD7 668 aa10.49□□□□□ -0.73
PHGDH-212ENST00000641247 DUOXA1Q1HG43 343 aa10.49□□□□□ -0.73
PHGDH-212ENST00000641247 SLC41A1Q8IVJ1 513 aa10.49□□□□□ -0.73
PHGDH-212ENST00000641247 KIFAP3Q92845 792 aa10.49□□□□□ -0.73
PHGDH-212ENST00000641247 GCNAQ96QF7 691 aa10.49□□□□□ -0.73
PHGDH-212ENST00000641247 KIF9Q9HAQ2 790 aa10.49□□□□□ -0.73
PHGDH-212ENST00000641247 POLMQ9NP87 494 aaPredicted RBP10.49□□□□□ -0.73
PHGDH-212ENST00000641247 RRAGDQ9NQL2 400 aaPredicted RBP10.49□□□□□ -0.73
PHGDH-212ENST00000641247 GCNT4Q9P109 453 aa10.49□□□□□ -0.73
PHGDH-212ENST00000641247 HCN2Q9UL51 889 aa10.49□□□□□ -0.73
PHGDH-212ENST00000641247 NUP205Q92621 2012 aa10.49□□□□□ -0.73
PHGDH-212ENST00000641247 PLXNB3Q9ULL4 1909 aa10.48□□□□□ -0.73
PHGDH-212ENST00000641247 E9PMD0 336 aa10.48□□□□□ -0.73
PHGDH-212ENST00000641247 PIRO00625 290 aa10.48□□□□□ -0.73
PHGDH-212ENST00000641247 HIP1RO75146 1068 aa10.48□□□□□ -0.73
PHGDH-212ENST00000641247 TOM1L1O75674 476 aa10.48□□□□□ -0.73
PHGDH-212ENST00000641247 KLF8O95600 359 aaPredicted RBP10.48□□□□□ -0.73
PHGDH-212ENST00000641247 CYP11A1P05108 521 aa10.48□□□□□ -0.73
PHGDH-212ENST00000641247 DDX6P26196 483 aaKnown RBP eCLIP10.48□□□□□ -0.73
PHGDH-212ENST00000641247 GJB2P29033 226 aa10.48□□□□□ -0.73
PHGDH-212ENST00000641247 MCM7P33993 719 aa10.48□□□□□ -0.73
PHGDH-212ENST00000641247 TIE1P35590 1138 aa10.48□□□□□ -0.73
PHGDH-212ENST00000641247 KIR2DL1P43626 348 aaPredicted RBP10.48□□□□□ -0.73
PHGDH-212ENST00000641247 IFNAR2P48551 515 aa10.48□□□□□ -0.73
PHGDH-212ENST00000641247 MCL1Q07820 350 aa10.48□□□□□ -0.73
PHGDH-212ENST00000641247 USP4Q13107 963 aa10.48□□□□□ -0.73
PHGDH-212ENST00000641247 VEPH1Q14D04 833 aa10.48□□□□□ -0.73
PHGDH-212ENST00000641247 SAFBQ15424 915 aaKnown RBP eCLIP10.48□□□□□ -0.73
PHGDH-212ENST00000641247 TAF12Q16514 161 aa10.48□□□□□ -0.73
PHGDH-212ENST00000641247 CCDC142Q17RM4 750 aa10.48□□□□□ -0.73
PHGDH-212ENST00000641247 HS1BP3Q53T59 392 aa10.48□□□□□ -0.73
PHGDH-212ENST00000641247 C9orf57Q5W0N0 161 aa10.48□□□□□ -0.73
PHGDH-212ENST00000641247 SCARA3Q6AZY7 606 aa10.48□□□□□ -0.73
PHGDH-212ENST00000641247 TOGARAM2Q6ZUX3 1019 aa10.48□□□□□ -0.73
PHGDH-212ENST00000641247 C12orf40Q86WS4 652 aa10.48□□□□□ -0.73
PHGDH-212ENST00000641247 ARL14EPQ8N8R7 260 aaPredicted RBP10.48□□□□□ -0.73
PHGDH-212ENST00000641247 HMGB4Q8WW32 186 aa10.48□□□□□ -0.73
PHGDH-212ENST00000641247 SLC39A7Q92504 469 aa10.48□□□□□ -0.73
PHGDH-212ENST00000641247 PI4K2AQ9BTU6 479 aa10.48□□□□□ -0.73
PHGDH-212ENST00000641247 RUSC1Q9BVN2 902 aa10.48□□□□□ -0.73
PHGDH-212ENST00000641247 CD93Q9NPY3 652 aa10.48□□□□□ -0.73
PHGDH-212ENST00000641247 KMT5AQ9NQR1 393 aa10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms