RNA–Protein interactions for RNA: ENST00000610756.4

TCF3-219, Transcript of transcription factor 3, humanhuman

TSL 1 (best)

Gene TCF3, Length 1,343 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF3-219ENST00000610756 SOBPA7XYQ1 873 aa20.6■□□□□ 0.89
TCF3-219ENST00000610756 KINO60870 393 aaKnown RBP20.6■□□□□ 0.89
TCF3-219ENST00000610756 GADD45BO75293 160 aaPredicted RBP20.6■□□□□ 0.89
TCF3-219ENST00000610756 F11P03951 625 aa20.6■□□□□ 0.89
TCF3-219ENST00000610756 KRT13P13646 458 aa20.6■□□□□ 0.89
TCF3-219ENST00000610756 PTPN1P18031 435 aaKnown RBP20.6■□□□□ 0.89
TCF3-219ENST00000610756 GPR15P49685 360 aa20.6■□□□□ 0.89
TCF3-219ENST00000610756 PSMC1P62191 440 aaKnown RBP20.6■□□□□ 0.89
TCF3-219ENST00000610756 PRKCQQ04759 706 aa20.6■□□□□ 0.89
TCF3-219ENST00000610756 CCDC142Q17RM4 750 aa20.6■□□□□ 0.89
TCF3-219ENST00000610756 STXBP5Q5T5C0 1151 aa20.6■□□□□ 0.89
TCF3-219ENST00000610756 VITQ6UXI7 678 aa20.6■□□□□ 0.89
TCF3-219ENST00000610756 ARID3BQ8IVW6 561 aaPredicted RBP20.6■□□□□ 0.89
TCF3-219ENST00000610756 PRSS33Q8NF86 280 aa20.6■□□□□ 0.89
TCF3-219ENST00000610756 DEPDC1BQ8WUY9 529 aa20.6■□□□□ 0.89
TCF3-219ENST00000610756 ERCC4Q92889 916 aaPredicted RBP20.6■□□□□ 0.89
TCF3-219ENST00000610756 MYRFLQ96LU7 910 aa20.6■□□□□ 0.89
TCF3-219ENST00000610756 TBC1D17Q9HA65 648 aa20.6■□□□□ 0.89
TCF3-219ENST00000610756 TRPV5Q9NQA5 729 aa20.6■□□□□ 0.89
TCF3-219ENST00000610756 A8MXQ7 604 aa20.59■□□□□ 0.89
TCF3-219ENST00000610756 CETN3O15182 167 aa20.59■□□□□ 0.89
TCF3-219ENST00000610756 GALR2O43603 387 aaPredicted RBP20.59■□□□□ 0.89
TCF3-219ENST00000610756 NOL4O94818 638 aa20.59■□□□□ 0.89
TCF3-219ENST00000610756 P4HA1P13674 534 aa20.59■□□□□ 0.89
TCF3-219ENST00000610756 PTPN5P54829 565 aa20.59■□□□□ 0.89
TCF3-219ENST00000610756 NLRP12P59046 1061 aa20.59■□□□□ 0.89
TCF3-219ENST00000610756 GPR158Q5T848 1215 aa20.59■□□□□ 0.89
TCF3-219ENST00000610756 TMEM150AQ86TG1 271 aa20.59■□□□□ 0.89
TCF3-219ENST00000610756 ADSSL1Q8N142 457 aa20.59■□□□□ 0.89
TCF3-219ENST00000610756 DNASE1L2Q92874 299 aa20.59■□□□□ 0.89
TCF3-219ENST00000610756 IRF7Q92985 503 aa20.59■□□□□ 0.89
TCF3-219ENST00000610756 MYLPFQ96A32 169 aa20.59■□□□□ 0.89
TCF3-219ENST00000610756 TRMT2BQ96GJ1 504 aaKnown RBP20.59■□□□□ 0.89
TCF3-219ENST00000610756 PCED1BQ96HM7 432 aa20.59■□□□□ 0.89
TCF3-219ENST00000610756 SPATA17Q96L03 361 aa20.59■□□□□ 0.89
TCF3-219ENST00000610756 GCNAQ96QF7 691 aa20.59■□□□□ 0.89
TCF3-219ENST00000610756 DDX23Q9BUQ8 820 aaKnown RBP20.59■□□□□ 0.89
TCF3-219ENST00000610756 UXTQ9UBK9 157 aaPredicted RBP20.59■□□□□ 0.89
TCF3-219ENST00000610756 SLC38A8A6NNN8 435 aa20.58■□□□□ 0.89
TCF3-219ENST00000610756 HEPACAM2A8MVW5 462 aa20.58■□□□□ 0.89
TCF3-219ENST00000610756 ASS1P00966 412 aaKnown RBP20.58■□□□□ 0.89
TCF3-219ENST00000610756 BDNFP23560 247 aa20.58■□□□□ 0.89
TCF3-219ENST00000610756 GTF2H1P32780 548 aa20.58■□□□□ 0.89
TCF3-219ENST00000610756 CDH8P55286 799 aa20.58■□□□□ 0.89
TCF3-219ENST00000610756 PPP3CAQ08209 521 aa20.58■□□□□ 0.89
TCF3-219ENST00000610756 TCF15Q12870 199 aa20.58■□□□□ 0.89
TCF3-219ENST00000610756 MLF2Q15773 248 aaPredicted RBP20.58■□□□□ 0.89
TCF3-219ENST00000610756 SDHAF4Q5VUM1 108 aa20.58■□□□□ 0.89
TCF3-219ENST00000610756 SCN4BQ8IWT1 228 aa20.58■□□□□ 0.89
TCF3-219ENST00000610756 SLC46A2Q9BY10 475 aa20.58■□□□□ 0.89
TCF3-219ENST00000610756 IRF2BPLQ9H1B7 796 aa20.58■□□□□ 0.89
TCF3-219ENST00000610756 BRD9Q9H8M2 597 aa20.58■□□□□ 0.89
TCF3-219ENST00000610756 OBP2AQ9NY56 170 aa20.58■□□□□ 0.89
TCF3-219ENST00000610756 SIT1Q9Y3P8 196 aa20.58■□□□□ 0.89
TCF3-219ENST00000610756 HLA-DRAP01903 254 aa20.57■□□□□ 0.88
TCF3-219ENST00000610756 RFX1P22670 979 aa20.57■□□□□ 0.88
TCF3-219ENST00000610756 DDX6P26196 483 aaKnown RBP eCLIP20.57■□□□□ 0.882e-6■□□□□ 11.3
TCF3-219ENST00000610756 GCLMP48507 274 aa20.57■□□□□ 0.88
TCF3-219ENST00000610756 FKBP3Q00688 224 aaKnown RBP20.57■□□□□ 0.88
TCF3-219ENST00000610756 CYP27A1Q02318 531 aa20.57■□□□□ 0.88
TCF3-219ENST00000610756 NHLH1Q02575 133 aa20.57■□□□□ 0.88
TCF3-219ENST00000610756 FCHO2Q0JRZ9 810 aa20.57■□□□□ 0.88
TCF3-219ENST00000610756 GRM2Q14416 872 aa20.57■□□□□ 0.88
TCF3-219ENST00000610756 MDH1BQ5I0G3 518 aa20.57■□□□□ 0.88
TCF3-219ENST00000610756 ANKRD40Q6AI12 368 aa20.57■□□□□ 0.88
TCF3-219ENST00000610756 ZC3H3Q8IXZ2 948 aaKnown RBP20.57■□□□□ 0.88
TCF3-219ENST00000610756 B3GALNT2Q8NCR0 500 aa20.57■□□□□ 0.88
TCF3-219ENST00000610756 EEF2KMTQ96G04 330 aa20.57■□□□□ 0.88
TCF3-219ENST00000610756 TSG101Q99816 390 aa20.57■□□□□ 0.88
TCF3-219ENST00000610756 SMYD3Q9H7B4 428 aa20.57■□□□□ 0.88
TCF3-219ENST00000610756 MAGED2Q9UNF1 606 aaPredicted RBP20.57■□□□□ 0.88
TCF3-219ENST00000610756 KANSL1LA0AUZ9 987 aa20.56■□□□□ 0.88
TCF3-219ENST00000610756 ZNF263O14978 683 aa20.56■□□□□ 0.88
TCF3-219ENST00000610756 TRIM49P0CI25 452 aa20.56■□□□□ 0.88
TCF3-219ENST00000610756 TRIM49CP0CI26 452 aa20.56■□□□□ 0.88
TCF3-219ENST00000610756 GDI1P31150 447 aa20.56■□□□□ 0.88
TCF3-219ENST00000610756 GRIK1P39086 918 aa20.56■□□□□ 0.88
TCF3-219ENST00000610756 CYP4F8P98187 520 aa20.56■□□□□ 0.88
TCF3-219ENST00000610756 LRRC63Q05C16 580 aa20.56■□□□□ 0.88
TCF3-219ENST00000610756 CMTM8Q8IZV2 173 aa20.56■□□□□ 0.88
TCF3-219ENST00000610756 ELMO3Q96BJ8 720 aa20.56■□□□□ 0.88
TCF3-219ENST00000610756 RSPRY1Q96DX4 576 aa20.56■□□□□ 0.88
TCF3-219ENST00000610756 DHTKD1Q96HY7 919 aaPredicted RBP20.56■□□□□ 0.88
TCF3-219ENST00000610756 TNIP3Q96KP6 325 aa20.56■□□□□ 0.88
TCF3-219ENST00000610756 C8orf48Q96LL4 319 aa20.56■□□□□ 0.88
TCF3-219ENST00000610756 DPEP3Q9H4B8 488 aa20.56■□□□□ 0.88
TCF3-219ENST00000610756 TMEM8AQ9HCN3 771 aa20.56■□□□□ 0.88
TCF3-219ENST00000610756 DPYSL4O14531 572 aa20.55■□□□□ 0.88
TCF3-219ENST00000610756 CHADO15335 359 aa20.55■□□□□ 0.88
TCF3-219ENST00000610756 EPB41P11171 864 aaKnown RBP20.55■□□□□ 0.88
TCF3-219ENST00000610756 PPP1R2P41236 205 aa20.55■□□□□ 0.88
TCF3-219ENST00000610756 PIK3CAP42336 1068 aa20.55■□□□□ 0.88
TCF3-219ENST00000610756 PMS1P54277 932 aaKnown RBP20.55■□□□□ 0.88
TCF3-219ENST00000610756 STIM1Q13586 685 aa20.55■□□□□ 0.88
TCF3-219ENST00000610756 KRT39Q6A163 491 aa20.55■□□□□ 0.88
TCF3-219ENST00000610756 MON1AQ86VX9 555 aa20.55■□□□□ 0.88
TCF3-219ENST00000610756 GPIHBP1Q8IV16 184 aa20.55■□□□□ 0.88
TCF3-219ENST00000610756 CCDC105Q8IYK2 499 aa20.55■□□□□ 0.88
TCF3-219ENST00000610756 CRYBG2Q8N1P7 616 aa20.55■□□□□ 0.88
TCF3-219ENST00000610756 TAS1R2Q8TE23 839 aa20.55■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms