RNA–Protein interactions for RNA: ENST00000606785.1

LINC00397-202, long intergenic non-protein coding RNA 397, humanhuman

TSL 5 BASIC

Gene LINC00397, Length 409 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00397-202ENST00000606785 TMEM98Q9Y2Y6 226 aa5.91□□□□□ -1.46
LINC00397-202ENST00000606785 DTNAQ9Y4J8 743 aa5.91□□□□□ -1.46
LINC00397-202ENST00000606785 HS3ST4Q9Y661 456 aa5.91□□□□□ -1.46
LINC00397-202ENST00000606785 A0A1B0GTL3 188 aa5.9□□□□□ -1.46
LINC00397-202ENST00000606785 MROH6A6NGR9 719 aa5.9□□□□□ -1.46
LINC00397-202ENST00000606785 PRR5-ARHGAP8B1AHC4 643 aa5.9□□□□□ -1.46
LINC00397-202ENST00000606785 B9A039 149 aa5.9□□□□□ -1.46
LINC00397-202ENST00000606785 FCHO1O14526 889 aa5.9□□□□□ -1.46
LINC00397-202ENST00000606785 ACTL6BO94805 426 aa5.9□□□□□ -1.46
LINC00397-202ENST00000606785 ITGB1P05556 798 aa5.9□□□□□ -1.46
LINC00397-202ENST00000606785 LDHCP07864 332 aa5.9□□□□□ -1.46
LINC00397-202ENST00000606785 HSP90AA1P07900 732 aaKnown RBP5.9□□□□□ -1.46
LINC00397-202ENST00000606785 MED14OSP0DP75 135 aa5.9□□□□□ -1.46
LINC00397-202ENST00000606785 PECAM1P16284 738 aaPredicted RBP5.9□□□□□ -1.46
LINC00397-202ENST00000606785 CNTFP26441 200 aa5.9□□□□□ -1.46
LINC00397-202ENST00000606785 ATICP31939 592 aa5.9□□□□□ -1.46
LINC00397-202ENST00000606785 ADD2P35612 726 aa5.9□□□□□ -1.46
LINC00397-202ENST00000606785 RXRGP48443 463 aa5.9□□□□□ -1.46
LINC00397-202ENST00000606785 PTDSS1P48651 473 aaKnown RBP5.9□□□□□ -1.46
LINC00397-202ENST00000606785 PAPOLAP51003 745 aaKnown RBP5.9□□□□□ -1.46
LINC00397-202ENST00000606785 PNLIPRP1P54315 467 aa5.9□□□□□ -1.46
LINC00397-202ENST00000606785 IQCB1Q15051 598 aa5.9□□□□□ -1.46
LINC00397-202ENST00000606785 EFCAB12Q6NXP0 572 aa5.9□□□□□ -1.46
LINC00397-202ENST00000606785 DRICH1Q6PGQ1 229 aaPredicted RBP5.9□□□□□ -1.46
LINC00397-202ENST00000606785 C2CD5Q86YS7 1000 aa5.9□□□□□ -1.46
LINC00397-202ENST00000606785 HERC6Q8IVU3 1022 aa5.9□□□□□ -1.46
LINC00397-202ENST00000606785 GPR135Q8IZ08 494 aa5.9□□□□□ -1.46
LINC00397-202ENST00000606785 ESX1Q8N693 406 aa5.9□□□□□ -1.46
LINC00397-202ENST00000606785 RNF169Q8NCN4 708 aa5.9□□□□□ -1.46
LINC00397-202ENST00000606785 OR1N1Q8NGS0 311 aa5.9□□□□□ -1.46
LINC00397-202ENST00000606785 NUP133Q8WUM0 1156 aa5.9□□□□□ -1.46
LINC00397-202ENST00000606785 HERVK_113Q902F9 699 aa5.9□□□□□ -1.46
LINC00397-202ENST00000606785 RILPL2Q969X0 211 aa5.9□□□□□ -1.46
LINC00397-202ENST00000606785 SLC46A1Q96NT5 459 aa5.9□□□□□ -1.46
LINC00397-202ENST00000606785 RBM15Q96T37 977 aaKnown RBP eCLIP5.9□□□□□ -1.46
LINC00397-202ENST00000606785 DDX23Q9BUQ8 820 aaKnown RBP5.9□□□□□ -1.46
LINC00397-202ENST00000606785 C12orf65Q9H3J6 166 aaKnown RBP5.9□□□□□ -1.46
LINC00397-202ENST00000606785 ETAA1Q9NY74 926 aa5.9□□□□□ -1.46
LINC00397-202ENST00000606785 KCTD3Q9Y597 815 aa5.9□□□□□ -1.46
LINC00397-202ENST00000606785 HMX3A6NHT5 357 aa5.89□□□□□ -1.47
LINC00397-202ENST00000606785 TISP43B9A030 160 aa5.89□□□□□ -1.47
LINC00397-202ENST00000606785 POLRMTO00411 1230 aaKnown RBP5.89□□□□□ -1.47
LINC00397-202ENST00000606785 DCLK1O15075 740 aa5.89□□□□□ -1.47
LINC00397-202ENST00000606785 RRP9O43818 475 aaKnown RBP5.89□□□□□ -1.47
LINC00397-202ENST00000606785 B4GALT4O60513 344 aa5.89□□□□□ -1.47
LINC00397-202ENST00000606785 COQ9O75208 318 aa5.89□□□□□ -1.47
LINC00397-202ENST00000606785 VPS4BO75351 444 aa5.89□□□□□ -1.47
LINC00397-202ENST00000606785 USP1O94782 785 aa5.89□□□□□ -1.47
LINC00397-202ENST00000606785 MST1P26927 711 aa5.89□□□□□ -1.47
LINC00397-202ENST00000606785 SLC5A2P31639 672 aa5.89□□□□□ -1.47
LINC00397-202ENST00000606785 EIF5P55010 431 aaKnown RBP5.89□□□□□ -1.47
LINC00397-202ENST00000606785 SATB1Q01826 763 aa5.89□□□□□ -1.47
LINC00397-202ENST00000606785 PIGFQ07326 219 aa5.89□□□□□ -1.47
LINC00397-202ENST00000606785 SLFN5Q08AF3 891 aa5.89□□□□□ -1.47
LINC00397-202ENST00000606785 CSRP2Q16527 193 aa5.89□□□□□ -1.47
LINC00397-202ENST00000606785 ZNF750Q32MQ0 723 aa5.89□□□□□ -1.47
LINC00397-202ENST00000606785 MGAT5BQ3V5L5 792 aa5.89□□□□□ -1.47
LINC00397-202ENST00000606785 NOMO2Q5JPE7 1267 aa5.89□□□□□ -1.47
LINC00397-202ENST00000606785 MFSD5Q6N075 450 aa5.89□□□□□ -1.47
LINC00397-202ENST00000606785 C1orf122Q6ZSJ8 110 aa5.89□□□□□ -1.47
LINC00397-202ENST00000606785 TTLL10Q6ZVT0 673 aa5.89□□□□□ -1.47
LINC00397-202ENST00000606785 MED25Q71SY5 747 aa5.89□□□□□ -1.47
LINC00397-202ENST00000606785 ZFPM1Q8IX07 1006 aa5.89□□□□□ -1.47
LINC00397-202ENST00000606785 LRRC56Q8IYG6 542 aaPredicted RBP5.89□□□□□ -1.47
LINC00397-202ENST00000606785 CFAP52Q8N1V2 620 aa5.89□□□□□ -1.47
LINC00397-202ENST00000606785 THAP4Q8WY91 577 aa5.89□□□□□ -1.47
LINC00397-202ENST00000606785 DPYSL5Q9BPU6 564 aa5.89□□□□□ -1.47
LINC00397-202ENST00000606785 CPPED1Q9BRF8 314 aaPredicted RBP5.89□□□□□ -1.47
LINC00397-202ENST00000606785 RTKNQ9BST9 563 aa5.89□□□□□ -1.47
LINC00397-202ENST00000606785 TLR10Q9BXR5 811 aa5.89□□□□□ -1.47
LINC00397-202ENST00000606785 TTYH3Q9C0H2 523 aa5.89□□□□□ -1.47
LINC00397-202ENST00000606785 PABPC3Q9H361 631 aaKnown RBP5.89□□□□□ -1.47
LINC00397-202ENST00000606785 TP63Q9H3D4 680 aaPredicted RBP5.89□□□□□ -1.47
LINC00397-202ENST00000606785 NELFAQ9H3P2 528 aa5.89□□□□□ -1.47
LINC00397-202ENST00000606785 UBN1Q9NPG3 1134 aa5.89□□□□□ -1.47
LINC00397-202ENST00000606785 PRDM8Q9NQV8 689 aa5.89□□□□□ -1.47
LINC00397-202ENST00000606785 DNMT3BQ9UBC3 853 aaKnown RBP5.89□□□□□ -1.47
LINC00397-202ENST00000606785 FBXO2Q9UK22 296 aaPredicted RBP5.89□□□□□ -1.47
LINC00397-202ENST00000606785 FEM1BQ9UK73 627 aa5.89□□□□□ -1.47
LINC00397-202ENST00000606785 CNOT6Q9ULM6 557 aaKnown RBP5.89□□□□□ -1.47
LINC00397-202ENST00000606785 OAZ3Q9UMX2 235 aa5.89□□□□□ -1.47
LINC00397-202ENST00000606785 SHOC2Q9UQ13 582 aa5.89□□□□□ -1.47
LINC00397-202ENST00000606785 CDY1Q9Y6F8 540 aa5.89□□□□□ -1.47
LINC00397-202ENST00000606785 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa5.88□□□□□ -1.47
LINC00397-202ENST00000606785 DRGXA6NNA5 263 aa5.88□□□□□ -1.47
LINC00397-202ENST00000606785 RFXAPO00287 272 aa5.88□□□□□ -1.47
LINC00397-202ENST00000606785 PCDH17O14917 1159 aa5.88□□□□□ -1.47
LINC00397-202ENST00000606785 HOXC11O43248 304 aaPredicted RBP5.88□□□□□ -1.47
LINC00397-202ENST00000606785 SNX2O60749 519 aa5.88□□□□□ -1.47
LINC00397-202ENST00000606785 SOAT2O75908 522 aa5.88□□□□□ -1.47
LINC00397-202ENST00000606785 PIAS2O75928 621 aa5.88□□□□□ -1.47
LINC00397-202ENST00000606785 PRSS23O95084 383 aa5.88□□□□□ -1.47
LINC00397-202ENST00000606785 NTSR2O95665 410 aa5.88□□□□□ -1.47
LINC00397-202ENST00000606785 CD4P01730 458 aa5.88□□□□□ -1.47
LINC00397-202ENST00000606785 ATXN1LP0C7T5 689 aaKnown RBP5.88□□□□□ -1.47
LINC00397-202ENST00000606785 GYS1P13807 737 aa5.88□□□□□ -1.47
LINC00397-202ENST00000606785 XBP1P17861 261 aa5.88□□□□□ -1.47
LINC00397-202ENST00000606785 GNAT2P19087 354 aa5.88□□□□□ -1.47
LINC00397-202ENST00000606785 MGAT1P26572 445 aa5.88□□□□□ -1.47
LINC00397-202ENST00000606785 ELF1P32519 619 aa5.88□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 69.4 ms