RNA–Protein interactions for RNA: ENST00000593282.5

LINC01539-206, Transcript of long intergenic non-protein coding RNA 1539, humanhuman

TSL 4 BASIC

Gene LINC01539, Length 678 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01539-206ENST00000593282 TRMT2AQ8IZ69 625 aaKnown RBP4.96□□□□□ -1.62
LINC01539-206ENST00000593282 SH2D3CQ8N5H7 860 aa4.96□□□□□ -1.62
LINC01539-206ENST00000593282 DTX3Q8N9I9 347 aa4.96□□□□□ -1.62
LINC01539-206ENST00000593282 GLIS1Q8NBF1 620 aa4.96□□□□□ -1.62
LINC01539-206ENST00000593282 DDX55Q8NHQ9 600 aaKnown RBP eCLIP4.96□□□□□ -1.62
LINC01539-206ENST00000593282 CALML6Q8TD86 181 aa4.96□□□□□ -1.62
LINC01539-206ENST00000593282 SSH3Q8TE77 659 aa4.96□□□□□ -1.62
LINC01539-206ENST00000593282 ZNF384Q8TF68 577 aa4.96□□□□□ -1.62
LINC01539-206ENST00000593282 GAB3Q8WWW8 586 aa4.96□□□□□ -1.62
LINC01539-206ENST00000593282 THAP4Q8WY91 577 aa4.96□□□□□ -1.62
LINC01539-206ENST00000593282 TRIM43Q96BQ3 446 aaPredicted RBP4.96□□□□□ -1.62
LINC01539-206ENST00000593282 VMP1Q96GC9 406 aa4.96□□□□□ -1.62
LINC01539-206ENST00000593282 LRRC37BQ96QE4 947 aa4.96□□□□□ -1.62
LINC01539-206ENST00000593282 MPHOSPH8Q99549 860 aa4.96□□□□□ -1.62
LINC01539-206ENST00000593282 BAG1Q99933 345 aaPredicted RBP4.96□□□□□ -1.62
LINC01539-206ENST00000593282 DDX23Q9BUQ8 820 aaKnown RBP4.96□□□□□ -1.62
LINC01539-206ENST00000593282 TRIM54Q9BYV2 358 aa4.96□□□□□ -1.62
LINC01539-206ENST00000593282 PAIP1Q9H074 479 aaKnown RBP4.96□□□□□ -1.62
LINC01539-206ENST00000593282 MEGF9Q9H1U4 602 aa4.96□□□□□ -1.62
LINC01539-206ENST00000593282 SACM1LQ9NTJ5 587 aa4.96□□□□□ -1.62
LINC01539-206ENST00000593282 CALCOCO1Q9P1Z2 691 aa4.96□□□□□ -1.62
LINC01539-206ENST00000593282 CEP72Q9P209 647 aa4.96□□□□□ -1.62
LINC01539-206ENST00000593282 CFDP1Q9UEE9 299 aaPredicted RBP4.96□□□□□ -1.62
LINC01539-206ENST00000593282 TBC1D29Q9UFV1 150 aa4.96□□□□□ -1.62
LINC01539-206ENST00000593282 MAGEL2Q9UJ55 1249 aa4.96□□□□□ -1.62
LINC01539-206ENST00000593282 ADAM29Q9UKF5 820 aa4.96□□□□□ -1.62
LINC01539-206ENST00000593282 USP18Q9UMW8 372 aa4.96□□□□□ -1.62
LINC01539-206ENST00000593282 PCDHA6Q9UN73 950 aa4.96□□□□□ -1.62
LINC01539-206ENST00000593282 SHROOM2Q13796 1616 aa4.96□□□□□ -1.62
LINC01539-206ENST00000593282 CEP170Q5SW79 1584 aa4.95□□□□□ -1.62
LINC01539-206ENST00000593282 TSPY2A6NKD2 308 aa4.95□□□□□ -1.62
LINC01539-206ENST00000593282 PTMAP06454 111 aaKnown RBP4.95□□□□□ -1.62
LINC01539-206ENST00000593282 SLC3A2P08195 630 aaKnown RBP4.95□□□□□ -1.62
LINC01539-206ENST00000593282 TSPY3P0CV98 308 aa4.95□□□□□ -1.62
LINC01539-206ENST00000593282 TSPY8P0CW00 308 aa4.95□□□□□ -1.62
LINC01539-206ENST00000593282 GABRB3P28472 473 aa4.95□□□□□ -1.62
LINC01539-206ENST00000593282 POLD2P49005 469 aa4.95□□□□□ -1.62
LINC01539-206ENST00000593282 FLT3LGP49771 235 aa4.95□□□□□ -1.62
LINC01539-206ENST00000593282 SEC24CP53992 1094 aa4.95□□□□□ -1.62
LINC01539-206ENST00000593282 PNLIPRP1P54315 467 aa4.95□□□□□ -1.62
LINC01539-206ENST00000593282 IL13RA1P78552 427 aa4.95□□□□□ -1.62
LINC01539-206ENST00000593282 TSPY1Q01534 308 aa4.95□□□□□ -1.62
LINC01539-206ENST00000593282 CUL4AQ13619 759 aa4.95□□□□□ -1.62
LINC01539-206ENST00000593282 NOMO1Q15155 1222 aa4.95□□□□□ -1.62
LINC01539-206ENST00000593282 KHDC1LQ5JSQ8 128 aa4.95□□□□□ -1.62
LINC01539-206ENST00000593282 ACAD10Q6JQN1 1059 aa4.95□□□□□ -1.62
LINC01539-206ENST00000593282 GAREM2Q75VX8 874 aa4.95□□□□□ -1.62
LINC01539-206ENST00000593282 RHOT1Q8IXI2 618 aa4.95□□□□□ -1.62
LINC01539-206ENST00000593282 CELF5Q8N6W0 485 aaKnown RBP4.95□□□□□ -1.62
LINC01539-206ENST00000593282 STPG3Q8N7X2 389 aa4.95□□□□□ -1.62
LINC01539-206ENST00000593282 CDYL2Q8N8U2 506 aa4.95□□□□□ -1.62
LINC01539-206ENST00000593282 Q8TCH9 128 aa4.95□□□□□ -1.62
LINC01539-206ENST00000593282 AFAP1L1Q8TED9 768 aa4.95□□□□□ -1.62
LINC01539-206ENST00000593282 ATRIPQ8WXE1 791 aa4.95□□□□□ -1.62
LINC01539-206ENST00000593282 ST8SIA4Q92187 359 aa4.95□□□□□ -1.62
LINC01539-206ENST00000593282 MAML1Q92585 1016 aa4.95□□□□□ -1.62
LINC01539-206ENST00000593282 HOXB13Q92826 284 aaPredicted RBP4.95□□□□□ -1.62
LINC01539-206ENST00000593282 ZUFSPQ96AP4 578 aa4.95□□□□□ -1.62
LINC01539-206ENST00000593282 RADILQ96JH8 1075 aa4.95□□□□□ -1.62
LINC01539-206ENST00000593282 LMF1Q96S06 567 aa4.95□□□□□ -1.62
LINC01539-206ENST00000593282 VRK1Q99986 396 aaPredicted RBP4.95□□□□□ -1.62
LINC01539-206ENST00000593282 BTBD2Q9BX70 525 aa4.95□□□□□ -1.62
LINC01539-206ENST00000593282 PITHD1Q9GZP4 211 aaPredicted RBP4.95□□□□□ -1.62
LINC01539-206ENST00000593282 PCED1AQ9H1Q7 454 aa4.95□□□□□ -1.62
LINC01539-206ENST00000593282 OR10A5Q9H207 317 aa4.95□□□□□ -1.62
LINC01539-206ENST00000593282 MTG2Q9H4K7 406 aa4.95□□□□□ -1.62
LINC01539-206ENST00000593282 WDCPQ9H6R7 721 aa4.95□□□□□ -1.62
LINC01539-206ENST00000593282 MLXIPQ9HAP2 919 aa4.95□□□□□ -1.62
LINC01539-206ENST00000593282 TDP1Q9NUW8 608 aa4.95□□□□□ -1.62
LINC01539-206ENST00000593282 ARGLU1Q9NWB6 273 aaPredicted RBP4.95□□□□□ -1.62
LINC01539-206ENST00000593282 RGS17Q9UGC6 210 aaPredicted RBP4.95□□□□□ -1.62
LINC01539-206ENST00000593282 HERC5Q9UII4 1024 aaKnown RBP4.95□□□□□ -1.62
LINC01539-206ENST00000593282 ZFP69BQ9UJL9 534 aa4.95□□□□□ -1.62
LINC01539-206ENST00000593282 VPS28Q9UK41 221 aa4.95□□□□□ -1.62
LINC01539-206ENST00000593282 ISY1Q9ULR0 285 aaKnown RBP4.95□□□□□ -1.62
LINC01539-206ENST00000593282 PCDHB6Q9Y5E3 794 aa4.95□□□□□ -1.62
LINC01539-206ENST00000593282 H7C0S8 307 aa4.94□□□□□ -1.62
LINC01539-206ENST00000593282 PIP5K1BO14986 540 aa4.94□□□□□ -1.62
LINC01539-206ENST00000593282 OPHN1O60890 802 aa4.94□□□□□ -1.62
LINC01539-206ENST00000593282 MAFO75444 373 aaPredicted RBP4.94□□□□□ -1.62
LINC01539-206ENST00000593282 NDST3O95803 873 aa4.94□□□□□ -1.62
LINC01539-206ENST00000593282 ITGA2BP08514 1039 aa4.94□□□□□ -1.62
LINC01539-206ENST00000593282 FTH1P19P0C7X4 201 aa4.94□□□□□ -1.62
LINC01539-206ENST00000593282 JUPP14923 745 aa4.94□□□□□ -1.62
LINC01539-206ENST00000593282 MALP21145 153 aa4.94□□□□□ -1.62
LINC01539-206ENST00000593282 CHMP24386 653 aa4.94□□□□□ -1.62
LINC01539-206ENST00000593282 APEX1P27695 318 aaKnown RBP4.94□□□□□ -1.62
LINC01539-206ENST00000593282 PLIN5Q00G26 463 aa4.94□□□□□ -1.62
LINC01539-206ENST00000593282 CD83Q01151 205 aa4.94□□□□□ -1.62
LINC01539-206ENST00000593282 KLF10Q13118 480 aa4.94□□□□□ -1.62
LINC01539-206ENST00000593282 TARDBPQ13148 414 aaKnown RBP eCLIP4.94□□□□□ -1.62
LINC01539-206ENST00000593282 SNAPC2Q13487 334 aa4.94□□□□□ -1.62
LINC01539-206ENST00000593282 RAB39AQ14964 217 aa4.94□□□□□ -1.62
LINC01539-206ENST00000593282 PRKD1Q15139 912 aaPredicted RBP4.94□□□□□ -1.62
LINC01539-206ENST00000593282 UBE3CQ15386 1083 aa4.94□□□□□ -1.62
LINC01539-206ENST00000593282 TSTQ16762 297 aaKnown RBP4.94□□□□□ -1.62
LINC01539-206ENST00000593282 NRN1LQ496H8 165 aa4.94□□□□□ -1.62
LINC01539-206ENST00000593282 SLC9C2Q5TAH2 1124 aa4.94□□□□□ -1.62
LINC01539-206ENST00000593282 MAP3K21Q5TCX8 1036 aa4.94□□□□□ -1.62
LINC01539-206ENST00000593282 ARL6IP4Q66PJ3 421 aaKnown RBP4.94□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms