RNA–Protein interactions for RNA: ENST00000589838.5

PRKCSH-209, Transcript of protein kinase C substrate 80K-H, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PRKCSH, Length 1,898 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-209ENST00000589838 RIBC1Q8N443 379 aaPredicted RBP20.17■□□□□ 0.82
PRKCSH-209ENST00000589838 P3H4Q92791 437 aa20.17■□□□□ 0.82
PRKCSH-209ENST00000589838 HEXIM2Q96MH2 286 aaKnown RBP20.17■□□□□ 0.82
PRKCSH-209ENST00000589838 CPXM1Q96SM3 734 aa20.17■□□□□ 0.82
PRKCSH-209ENST00000589838 RBM15Q96T37 977 aaKnown RBP eCLIP20.17■□□□□ 0.822e-6■□□□□ 9.1
PRKCSH-209ENST00000589838 C16orf70Q9BSU1 422 aa20.17■□□□□ 0.82
PRKCSH-209ENST00000589838 TUT1Q9H6E5 874 aaKnown RBP20.17■□□□□ 0.82
PRKCSH-209ENST00000589838 PCDH9Q9HC56 1237 aa20.17■□□□□ 0.82
PRKCSH-209ENST00000589838 LGALS13Q9UHV8 139 aa20.17■□□□□ 0.82
PRKCSH-209ENST00000589838 CYTH4Q9UIA0 394 aa20.17■□□□□ 0.82
PRKCSH-209ENST00000589838 BARX2Q9UMQ3 279 aaPredicted RBP20.17■□□□□ 0.82
PRKCSH-209ENST00000589838 KAT6AQ92794 2004 aa20.17■□□□□ 0.82
PRKCSH-209ENST00000589838 CDH16O75309 829 aa20.16■□□□□ 0.82
PRKCSH-209ENST00000589838 SLC25A11Q02978 314 aaKnown RBP20.16■□□□□ 0.82
PRKCSH-209ENST00000589838 PPARDQ03181 441 aa20.16■□□□□ 0.82
PRKCSH-209ENST00000589838 GPS1Q13098 491 aa20.16■□□□□ 0.82
PRKCSH-209ENST00000589838 IFT88Q13099 833 aa20.16■□□□□ 0.82
PRKCSH-209ENST00000589838 STILQ15468 1287 aa20.16■□□□□ 0.82
PRKCSH-209ENST00000589838 GJC2Q5T442 439 aaPredicted RBP20.16■□□□□ 0.82
PRKCSH-209ENST00000589838 RNF187Q5TA31 235 aaPredicted RBP20.16■□□□□ 0.82
PRKCSH-209ENST00000589838 CCDC121Q6ZUS5 278 aa20.16■□□□□ 0.82
PRKCSH-209ENST00000589838 ILDR2Q71H61 639 aa20.16■□□□□ 0.82
PRKCSH-209ENST00000589838 MICALL1Q8N3F8 863 aa20.16■□□□□ 0.82
PRKCSH-209ENST00000589838 JOSD2Q8TAC2 188 aa20.16■□□□□ 0.82
PRKCSH-209ENST00000589838 MCRS1Q96EZ8 462 aa20.16■□□□□ 0.82
PRKCSH-209ENST00000589838 NSRP1Q9H0G5 558 aaKnown RBP20.16■□□□□ 0.82
PRKCSH-209ENST00000589838 ZWILCHQ9H900 591 aa20.16■□□□□ 0.82
PRKCSH-209ENST00000589838 DNAJC17Q9NVM6 304 aaKnown RBP20.16■□□□□ 0.82
PRKCSH-209ENST00000589838 ASNSD1Q9NWL6 643 aa20.16■□□□□ 0.82
PRKCSH-209ENST00000589838 DPP3Q9NY33 737 aa20.16■□□□□ 0.82
PRKCSH-209ENST00000589838 A0A1B0GUA9 196 aa20.16■□□□□ 0.82
PRKCSH-209ENST00000589838 C3orf70A6NLC5 250 aaPredicted RBP20.16■□□□□ 0.82
PRKCSH-209ENST00000589838 M0QYV0 167 aa20.16■□□□□ 0.82
PRKCSH-209ENST00000589838 LRCH4O75427 683 aa20.16■□□□□ 0.82
PRKCSH-209ENST00000589838 ADCYAP1R1P41586 468 aa20.16■□□□□ 0.82
PRKCSH-209ENST00000589838 GTF2A2P52657 109 aa20.16■□□□□ 0.82
PRKCSH-209ENST00000589838 CDC42EP1Q00587 391 aa20.16■□□□□ 0.82
PRKCSH-209ENST00000589838 INCA1Q0VD86 236 aa20.16■□□□□ 0.82
PRKCSH-209ENST00000589838 DCAF4L1Q3SXM0 396 aa20.16■□□□□ 0.82
PRKCSH-209ENST00000589838 TXNRD3NBQ6F5E7 133 aa20.16■□□□□ 0.82
PRKCSH-209ENST00000589838 BBS12Q6ZW61 710 aa20.16■□□□□ 0.82
PRKCSH-209ENST00000589838 SLC35B2Q8TB61 432 aa20.16■□□□□ 0.82
PRKCSH-209ENST00000589838 ZNF317Q96PQ6 595 aaPredicted RBP20.16■□□□□ 0.82
PRKCSH-209ENST00000589838 METTL5Q9NRN9 209 aaKnown RBP20.16■□□□□ 0.82
PRKCSH-209ENST00000589838 MORF4L1Q9UBU8 362 aa20.16■□□□□ 0.82
PRKCSH-209ENST00000589838 CITO14578 2027 aa20.15■□□□□ 0.82
PRKCSH-209ENST00000589838 TSPAN1O60635 241 aa20.15■□□□□ 0.82
PRKCSH-209ENST00000589838 CSDE1O75534 798 aaKnown RBP20.15■□□□□ 0.82
PRKCSH-209ENST00000589838 ERBB2P04626 1255 aa20.15■□□□□ 0.82
PRKCSH-209ENST00000589838 ZNF286BP0CG31 522 aa20.15■□□□□ 0.82
PRKCSH-209ENST00000589838 KDELR1P24390 212 aa20.15■□□□□ 0.82
PRKCSH-209ENST00000589838 MYO1EQ12965 1108 aa20.15■□□□□ 0.82
PRKCSH-209ENST00000589838 GRIK4Q16099 956 aa20.15■□□□□ 0.82
PRKCSH-209ENST00000589838 TAZQ16635 292 aa20.15■□□□□ 0.82
PRKCSH-209ENST00000589838 QPCTQ16769 361 aa20.15■□□□□ 0.82
PRKCSH-209ENST00000589838 PPP1R16BQ96T49 567 aa20.15■□□□□ 0.82
PRKCSH-209ENST00000589838 SHOC2Q9UQ13 582 aa20.15■□□□□ 0.82
PRKCSH-209ENST00000589838 DERAQ9Y315 318 aa20.15■□□□□ 0.82
PRKCSH-209ENST00000589838 RRN3P2A6NIE6 340 aa20.14■□□□□ 0.81
PRKCSH-209ENST00000589838 SGK1O00141 431 aa20.14■□□□□ 0.81
PRKCSH-209ENST00000589838 GRM5P41594 1212 aa20.14■□□□□ 0.81
PRKCSH-209ENST00000589838 GPD2P43304 727 aa20.14■□□□□ 0.81
PRKCSH-209ENST00000589838 LIG3P49916 1009 aa20.14■□□□□ 0.81
PRKCSH-209ENST00000589838 NR1H3Q13133 447 aa20.14■□□□□ 0.81
PRKCSH-209ENST00000589838 DPP9Q86TI2 863 aa20.14■□□□□ 0.81
PRKCSH-209ENST00000589838 ANKS4BQ8N8V4 417 aa20.14■□□□□ 0.81
PRKCSH-209ENST00000589838 TWNKQ96RR1 684 aa20.14■□□□□ 0.81
PRKCSH-209ENST00000589838 KATNBL1Q9H079 304 aa20.14■□□□□ 0.81
PRKCSH-209ENST00000589838 PLEKHA5Q9HAU0 1116 aa20.14■□□□□ 0.81
PRKCSH-209ENST00000589838 SAYSD1Q9NPB0 183 aa20.14■□□□□ 0.81
PRKCSH-209ENST00000589838 ACTL7BQ9Y614 415 aa20.14■□□□□ 0.81
PRKCSH-209ENST00000589838 IQCA1LA6NCM1 817 aa20.13■□□□□ 0.81
PRKCSH-209ENST00000589838 DUSP28Q4G0W2 176 aa20.13■□□□□ 0.81
PRKCSH-209ENST00000589838 CCDC38Q502W7 563 aa20.13■□□□□ 0.81
PRKCSH-209ENST00000589838 ANKRD23Q86SG2 305 aa20.13■□□□□ 0.81
PRKCSH-209ENST00000589838 KCTD6Q8NC69 237 aa20.13■□□□□ 0.81
PRKCSH-209ENST00000589838 CCDC197Q8NCU1 140 aa20.13■□□□□ 0.81
PRKCSH-209ENST00000589838 DYDC1Q8WWB3 177 aa20.13■□□□□ 0.81
PRKCSH-209ENST00000589838 ACSF2Q96CM8 615 aaPredicted RBP20.13■□□□□ 0.81
PRKCSH-209ENST00000589838 C9orf72Q96LT7 481 aa20.13■□□□□ 0.81
PRKCSH-209ENST00000589838 PRMT1Q99873 361 aaKnown RBP20.13■□□□□ 0.81
PRKCSH-209ENST00000589838 NT5C1AQ9BXI3 368 aa20.13■□□□□ 0.81
PRKCSH-209ENST00000589838 PPCSQ9HAB8 311 aa20.13■□□□□ 0.81
PRKCSH-209ENST00000589838 SCN4AP35499 1836 aa20.13■□□□□ 0.81
PRKCSH-209ENST00000589838 CCL15-CCL14A0A0B4J2E2 113 aa20.13■□□□□ 0.81
PRKCSH-209ENST00000589838 GOLGA6L7A0A1B0GV03 622 aa20.13■□□□□ 0.81
PRKCSH-209ENST00000589838 SMAPO00193 183 aa20.13■□□□□ 0.81
PRKCSH-209ENST00000589838 CST8O60676 142 aa20.13■□□□□ 0.81
PRKCSH-209ENST00000589838 FSBPO95073 299 aa20.13■□□□□ 0.81
PRKCSH-209ENST00000589838 SNAI1O95863 264 aaPredicted RBP20.13■□□□□ 0.81
PRKCSH-209ENST00000589838 HOXD8P13378 290 aaPredicted RBP20.13■□□□□ 0.81
PRKCSH-209ENST00000589838 YBX3P16989 372 aaKnown RBP eCLIP20.13■□□□□ 0.815e-10■■□□□ 12.1
PRKCSH-209ENST00000589838 PCK1P35558 622 aa20.13■□□□□ 0.81
PRKCSH-209ENST00000589838 SLC20A2Q08357 652 aa20.13■□□□□ 0.81
PRKCSH-209ENST00000589838 CCL15Q16663 113 aa20.13■□□□□ 0.81
PRKCSH-209ENST00000589838 DGKDQ16760 1214 aa20.13■□□□□ 0.81
PRKCSH-209ENST00000589838 TTC31Q49AM3 519 aaPredicted RBP20.13■□□□□ 0.81
PRKCSH-209ENST00000589838 IQSEC1Q6DN90 963 aa20.13■□□□□ 0.81
PRKCSH-209ENST00000589838 LCLAT1Q6UWP7 414 aa20.13■□□□□ 0.81
PRKCSH-209ENST00000589838 CENPUQ71F23 418 aa20.13■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 85.9 ms