RNA–Protein interactions for RNA: ENST00000581021.5

SS18-218, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 4

Gene SS18, Length 588 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-218ENST00000581021 KRT39Q6A163 491 aa21.48■■□□□ 1.03
SS18-218ENST00000581021 TMEM150AQ86TG1 271 aa21.48■■□□□ 1.03
SS18-218ENST00000581021 SPATA2LQ8IUW3 424 aaPredicted RBP21.48■■□□□ 1.03
SS18-218ENST00000581021 UBALD2Q8IYN6 164 aa21.48■■□□□ 1.03
SS18-218ENST00000581021 LEMD2Q8NC56 503 aa21.48■■□□□ 1.03
SS18-218ENST00000581021 CEP63Q96MT8 703 aa21.48■■□□□ 1.03
SS18-218ENST00000581021 KXD1Q9BQD3 176 aa21.48■■□□□ 1.03
SS18-218ENST00000581021 BCO2Q9BYV7 579 aa21.48■■□□□ 1.03
SS18-218ENST00000581021 GDE1Q9NZC3 331 aa21.48■■□□□ 1.03
SS18-218ENST00000581021 ARMCX3Q9UH62 379 aaPredicted RBP21.48■■□□□ 1.03
SS18-218ENST00000581021 DUSP12Q9UNI6 340 aa21.48■■□□□ 1.03
SS18-218ENST00000581021 ASB3Q9Y575 518 aa21.48■■□□□ 1.03
SS18-218ENST00000581021 A8MXQ7 604 aa21.47■■□□□ 1.03
SS18-218ENST00000581021 ZNF197O14709 1029 aa21.47■■□□□ 1.03
SS18-218ENST00000581021 PTPN1P18031 435 aaKnown RBP21.47■■□□□ 1.03
SS18-218ENST00000581021 B3GALNT2Q8NCR0 500 aa21.47■■□□□ 1.03
SS18-218ENST00000581021 FAM200AQ8TCP9 573 aa21.47■■□□□ 1.03
SS18-218ENST00000581021 FUBP3Q96I24 572 aaKnown RBP eCLIP21.47■■□□□ 1.03
SS18-218ENST00000581021 GBP4Q96PP9 640 aa21.47■■□□□ 1.03
SS18-218ENST00000581021 TWNKQ96RR1 684 aa21.47■■□□□ 1.03
SS18-218ENST00000581021 B3GNT5Q9BYG0 378 aa21.47■■□□□ 1.03
SS18-218ENST00000581021 PLA2G2FQ9BZM2 168 aa21.47■■□□□ 1.03
SS18-218ENST00000581021 ZNF518BQ9C0D4 1074 aa21.47■■□□□ 1.03
SS18-218ENST00000581021 NUP62CLQ9H1M0 184 aa21.47■■□□□ 1.03
SS18-218ENST00000581021 PRR33A8MZF0 331 aa21.46■■□□□ 1.03
SS18-218ENST00000581021 CLDN5O00501 218 aa21.46■■□□□ 1.03
SS18-218ENST00000581021 BDNFP23560 247 aa21.46■■□□□ 1.03
SS18-218ENST00000581021 MAGEA11P43364 429 aa21.46■■□□□ 1.03
SS18-218ENST00000581021 CYP27A1Q02318 531 aa21.46■■□□□ 1.03
SS18-218ENST00000581021 VEPH1Q14D04 833 aa21.46■■□□□ 1.03
SS18-218ENST00000581021 TCERG1LQ5VWI1 586 aa21.46■■□□□ 1.03
SS18-218ENST00000581021 TANGO2Q6ICL3 276 aa21.46■■□□□ 1.03
SS18-218ENST00000581021 FILIP1Q7Z7B0 1213 aa21.46■■□□□ 1.03
SS18-218ENST00000581021 ITIH5Q86UX2 942 aa21.46■■□□□ 1.03
SS18-218ENST00000581021 ASB16Q96NS5 453 aa21.46■■□□□ 1.03
SS18-218ENST00000581021 NIF3L1Q9GZT8 377 aa21.46■■□□□ 1.03
SS18-218ENST00000581021 BICDL2A1A5D9 508 aa21.45■■□□□ 1.02
SS18-218ENST00000581021 TADA3O75528 432 aa21.45■■□□□ 1.02
SS18-218ENST00000581021 GABRR2P28476 465 aa21.45■■□□□ 1.02
SS18-218ENST00000581021 NDST1P52848 882 aa21.45■■□□□ 1.02
SS18-218ENST00000581021 CYP4F8P98187 520 aa21.45■■□□□ 1.02
SS18-218ENST00000581021 DPCR1Q3MIW9 517 aa21.45■■□□□ 1.02
SS18-218ENST00000581021 C4orf50Q6ZRC1 276 aa21.45■■□□□ 1.02
SS18-218ENST00000581021 PAQR9Q6ZVX9 377 aa21.45■■□□□ 1.02
SS18-218ENST00000581021 FRMD5Q7Z6J6 570 aa21.45■■□□□ 1.02
SS18-218ENST00000581021 SCN4BQ8IWT1 228 aa21.45■■□□□ 1.02
SS18-218ENST00000581021 FBXL13Q8NEE6 735 aa21.45■■□□□ 1.02
SS18-218ENST00000581021 NXPE3Q969Y0 559 aa21.45■■□□□ 1.02
SS18-218ENST00000581021 RSPRY1Q96DX4 576 aa21.45■■□□□ 1.02
SS18-218ENST00000581021 ARID3AQ99856 593 aa21.45■■□□□ 1.02
SS18-218ENST00000581021 MAGEC2Q9UBF1 373 aaPredicted RBP21.45■■□□□ 1.02
SS18-218ENST00000581021 RAPGEFL1Q9UHV5 662 aa21.45■■□□□ 1.02
SS18-218ENST00000581021 COQ4Q9Y3A0 265 aa21.45■■□□□ 1.02
SS18-218ENST00000581021 ZDBF2Q9HCK1 2354 aa21.45■■□□□ 1.02
SS18-218ENST00000581021 COL4A3Q01955 1670 aa21.44■■□□□ 1.02
SS18-218ENST00000581021 SLC38A8A6NNN8 435 aa21.44■■□□□ 1.02
SS18-218ENST00000581021 NOL4O94818 638 aa21.44■■□□□ 1.02
SS18-218ENST00000581021 INCA1Q0VD86 236 aa21.44■■□□□ 1.02
SS18-218ENST00000581021 MAPRE1Q15691 268 aaKnown RBP21.44■■□□□ 1.02
SS18-218ENST00000581021 IER5LQ5T953 404 aa21.44■■□□□ 1.02
SS18-218ENST00000581021 MTSS1LQ765P7 747 aa21.44■■□□□ 1.02
SS18-218ENST00000581021 ACOT1Q86TX2 421 aa21.44■■□□□ 1.02
SS18-218ENST00000581021 WHAMMQ8TF30 809 aa21.44■■□□□ 1.02
SS18-218ENST00000581021 RAB20Q9NX57 234 aa21.44■■□□□ 1.02
SS18-218ENST00000581021 RWDD2AQ9UIY3 292 aa21.44■■□□□ 1.02
SS18-218ENST00000581021 STX10O60499 249 aa21.43■■□□□ 1.02
SS18-218ENST00000581021 F11P03951 625 aa21.43■■□□□ 1.02
SS18-218ENST00000581021 SRFP11831 508 aa21.43■■□□□ 1.02
SS18-218ENST00000581021 P4HA1P13674 534 aa21.43■■□□□ 1.02
SS18-218ENST00000581021 VIPR2P41587 438 aa21.43■■□□□ 1.02
SS18-218ENST00000581021 NLRP12P59046 1061 aa21.43■■□□□ 1.02
SS18-218ENST00000581021 USP46P62068 366 aa21.43■■□□□ 1.02
SS18-218ENST00000581021 RPL10AP62906 217 aaKnown RBP21.43■■□□□ 1.02
SS18-218ENST00000581021 CCDC40Q4G0X9 1142 aa21.43■■□□□ 1.02
SS18-218ENST00000581021 VSTM1Q6UX27 236 aa21.43■■□□□ 1.02
SS18-218ENST00000581021 TRIM59Q8IWR1 403 aa21.43■■□□□ 1.02
SS18-218ENST00000581021 ZSCAN18Q8TBC5 510 aaPredicted RBP21.43■■□□□ 1.02
SS18-218ENST00000581021 SMARCD2Q92925 531 aa21.43■■□□□ 1.02
SS18-218ENST00000581021 TATDN2Q93075 761 aa21.43■■□□□ 1.02
SS18-218ENST00000581021 SRRTQ9BXP5 876 aaKnown RBP21.43■■□□□ 1.02
SS18-218ENST00000581021 IMPG2Q9BZV3 1241 aa21.43■■□□□ 1.02
SS18-218ENST00000581021 ATXN3LQ9H3M9 355 aa21.43■■□□□ 1.02
SS18-218ENST00000581021 METTL14Q9HCE5 456 aaKnown RBP21.43■■□□□ 1.02
SS18-218ENST00000581021 MAGED2Q9UNF1 606 aaPredicted RBP21.43■■□□□ 1.02
SS18-218ENST00000581021 F8VP50 259 aa21.42■■□□□ 1.02
SS18-218ENST00000581021 OBSL1O75147 1896 aa21.42■■□□□ 1.02
SS18-218ENST00000581021 ECI2O75521 394 aa21.42■■□□□ 1.02
SS18-218ENST00000581021 CFHP08603 1231 aa21.42■■□□□ 1.02
SS18-218ENST00000581021 CCDC130P13994 396 aa21.42■■□□□ 1.02
SS18-218ENST00000581021 CD58P19256 250 aa21.42■■□□□ 1.02
SS18-218ENST00000581021 FMO5P49326 533 aa21.42■■□□□ 1.02
SS18-218ENST00000581021 GPC5P78333 572 aa21.42■■□□□ 1.02
SS18-218ENST00000581021 IRF2BP1Q8IU81 584 aa21.42■■□□□ 1.02
SS18-218ENST00000581021 GPIHBP1Q8IV16 184 aa21.42■■□□□ 1.02
SS18-218ENST00000581021 FUKQ8N0W3 1084 aa21.42■■□□□ 1.02
SS18-218ENST00000581021 C12orf29Q8N999 325 aa21.42■■□□□ 1.02
SS18-218ENST00000581021 MYRFLQ96LU7 910 aa21.42■■□□□ 1.02
SS18-218ENST00000581021 ELOVL4Q9GZR5 314 aa21.42■■□□□ 1.02
SS18-218ENST00000581021 CYP3A43Q9HB55 503 aa21.42■■□□□ 1.02
SS18-218ENST00000581021 ZNF318Q5VUA4 2279 aa21.41■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms