RNA–Protein interactions for RNA: ENST00000580540.1

SREBF1-219, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 4

Gene SREBF1, Length 540 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-219ENST00000580540 BDNFP23560 247 aa17.76■□□□□ 0.43
SREBF1-219ENST00000580540 GDI1P31150 447 aa17.76■□□□□ 0.43
SREBF1-219ENST00000580540 GRIK1P39086 918 aa17.76■□□□□ 0.43
SREBF1-219ENST00000580540 PIK3CAP42336 1068 aa17.76■□□□□ 0.43
SREBF1-219ENST00000580540 GCLMP48507 274 aa17.76■□□□□ 0.43
SREBF1-219ENST00000580540 MAPRE1Q15691 268 aaKnown RBP17.76■□□□□ 0.43
SREBF1-219ENST00000580540 MLF2Q15773 248 aaPredicted RBP17.76■□□□□ 0.43
SREBF1-219ENST00000580540 SGSM1Q2NKQ1 1148 aa17.76■□□□□ 0.43
SREBF1-219ENST00000580540 ZACNQ401N2 412 aa17.76■□□□□ 0.43
SREBF1-219ENST00000580540 VITQ6UXI7 678 aa17.76■□□□□ 0.43
SREBF1-219ENST00000580540 INTS8Q75QN2 995 aaKnown RBP17.76■□□□□ 0.43
SREBF1-219ENST00000580540 ARID3BQ8IVW6 561 aaPredicted RBP17.76■□□□□ 0.43
SREBF1-219ENST00000580540 YAF2Q8IY57 180 aa17.76■□□□□ 0.43
SREBF1-219ENST00000580540 FUBP3Q96I24 572 aaKnown RBP eCLIP17.76■□□□□ 0.43
SREBF1-219ENST00000580540 SHDQ96IW2 340 aa17.76■□□□□ 0.43
SREBF1-219ENST00000580540 TSG101Q99816 390 aa17.76■□□□□ 0.43
SREBF1-219ENST00000580540 DPEP3Q9H4B8 488 aa17.76■□□□□ 0.43
SREBF1-219ENST00000580540 IL21Q9HBE4 155 aa17.76■□□□□ 0.43
SREBF1-219ENST00000580540 CHMP5Q9NZZ3 219 aa17.76■□□□□ 0.43
SREBF1-219ENST00000580540 NME7Q9Y5B8 376 aa17.76■□□□□ 0.43
SREBF1-219ENST00000580540 KMT2EQ8IZD2 1858 aa17.75■□□□□ 0.43
SREBF1-219ENST00000580540 SLC38A8A6NNN8 435 aa17.75■□□□□ 0.43
SREBF1-219ENST00000580540 IKBKBO14920 756 aa17.75■□□□□ 0.43
SREBF1-219ENST00000580540 MAPK13O15264 365 aa17.75■□□□□ 0.43
SREBF1-219ENST00000580540 HLA-DRAP01903 254 aa17.75■□□□□ 0.43
SREBF1-219ENST00000580540 FAM163BP0C2L3 166 aa17.75■□□□□ 0.43
SREBF1-219ENST00000580540 P4HA1P13674 534 aa17.75■□□□□ 0.43
SREBF1-219ENST00000580540 HMGA1P17096 107 aaKnown RBP17.75■□□□□ 0.43
SREBF1-219ENST00000580540 PSMC3P17980 439 aa17.75■□□□□ 0.43
SREBF1-219ENST00000580540 PTPN1P18031 435 aaKnown RBP17.75■□□□□ 0.43
SREBF1-219ENST00000580540 EDRF1Q3B7T1 1238 aa17.75■□□□□ 0.43
SREBF1-219ENST00000580540 CFAP221Q4G0U5 840 aa17.75■□□□□ 0.43
SREBF1-219ENST00000580540 ZCWPW2Q504Y3 356 aa17.75■□□□□ 0.43
SREBF1-219ENST00000580540 C1orf220Q5T0J3 134 aa17.75■□□□□ 0.43
SREBF1-219ENST00000580540 MYCBPAPQ8TBZ2 947 aa17.75■□□□□ 0.43
SREBF1-219ENST00000580540 PCED1BQ96HM7 432 aa17.75■□□□□ 0.43
SREBF1-219ENST00000580540 FOXQ1Q9C009 403 aa17.75■□□□□ 0.43
SREBF1-219ENST00000580540 TASP1Q9H6P5 420 aa17.75■□□□□ 0.43
SREBF1-219ENST00000580540 ZNF263O14978 683 aa17.74■□□□□ 0.43
SREBF1-219ENST00000580540 EPB41P11171 864 aaKnown RBP17.74■□□□□ 0.43
SREBF1-219ENST00000580540 ANXA13P27216 316 aa17.74■□□□□ 0.43
SREBF1-219ENST00000580540 PTPN5P54829 565 aa17.74■□□□□ 0.43
SREBF1-219ENST00000580540 NLRP12P59046 1061 aa17.74■□□□□ 0.43
SREBF1-219ENST00000580540 SPOPLQ6IQ16 392 aa17.74■□□□□ 0.43
SREBF1-219ENST00000580540 MFSD6LQ8IWD5 586 aa17.74■□□□□ 0.43
SREBF1-219ENST00000580540 MAB21L3Q8N8X9 362 aa17.74■□□□□ 0.43
SREBF1-219ENST00000580540 DEPDC1BQ8WUY9 529 aa17.74■□□□□ 0.43
SREBF1-219ENST00000580540 E2F7Q96AV8 911 aa17.74■□□□□ 0.43
SREBF1-219ENST00000580540 RSPRY1Q96DX4 576 aa17.74■□□□□ 0.43
SREBF1-219ENST00000580540 VRTNQ9H8Y1 702 aa17.74■□□□□ 0.43
SREBF1-219ENST00000580540 TRPV4Q9HBA0 871 aa17.74■□□□□ 0.43
SREBF1-219ENST00000580540 MAN1B1Q9UKM7 699 aa17.74■□□□□ 0.43
SREBF1-219ENST00000580540 H0Y858 1186 aa17.73■□□□□ 0.43
SREBF1-219ENST00000580540 GALR2O43603 387 aaPredicted RBP17.73■□□□□ 0.43
SREBF1-219ENST00000580540 F11P03951 625 aa17.73■□□□□ 0.43
SREBF1-219ENST00000580540 DCNP07585 359 aaKnown RBP17.73■□□□□ 0.43
SREBF1-219ENST00000580540 CD72P21854 359 aa17.73■□□□□ 0.43
SREBF1-219ENST00000580540 MAGEA11P43364 429 aa17.73■□□□□ 0.43
SREBF1-219ENST00000580540 STARD6P59095 220 aa17.73■□□□□ 0.43
SREBF1-219ENST00000580540 NHLH1Q02575 133 aa17.73■□□□□ 0.43
SREBF1-219ENST00000580540 PRKCQQ04759 706 aa17.73■□□□□ 0.43
SREBF1-219ENST00000580540 PPP3CAQ08209 521 aa17.73■□□□□ 0.43
SREBF1-219ENST00000580540 TCF15Q12870 199 aa17.73■□□□□ 0.43
SREBF1-219ENST00000580540 STIM1Q13586 685 aa17.73■□□□□ 0.43
SREBF1-219ENST00000580540 UBXN2BQ14CS0 331 aa17.73■□□□□ 0.43
SREBF1-219ENST00000580540 ANKRD40Q6AI12 368 aa17.73■□□□□ 0.43
SREBF1-219ENST00000580540 PHLDB3Q6NSJ2 640 aa17.73■□□□□ 0.43
SREBF1-219ENST00000580540 VSTM1Q6UX27 236 aa17.73■□□□□ 0.43
SREBF1-219ENST00000580540 TPRG1Q6ZUI0 275 aa17.73■□□□□ 0.43
SREBF1-219ENST00000580540 B3GALNT2Q8NCR0 500 aa17.73■□□□□ 0.43
SREBF1-219ENST00000580540 SPATA20Q8TB22 786 aa17.73■□□□□ 0.43
SREBF1-219ENST00000580540 MRPS31Q92665 395 aaKnown RBP17.73■□□□□ 0.43
SREBF1-219ENST00000580540 IRF7Q92985 503 aa17.73■□□□□ 0.43
SREBF1-219ENST00000580540 MED10Q9BTT4 135 aa17.73■□□□□ 0.43
SREBF1-219ENST00000580540 MKNK1Q9BUB5 465 aa17.73■□□□□ 0.43
SREBF1-219ENST00000580540 SLC46A2Q9BY10 475 aa17.73■□□□□ 0.43
SREBF1-219ENST00000580540 GTPBP4Q9BZE4 634 aaKnown RBP17.73■□□□□ 0.43
SREBF1-219ENST00000580540 IMPG2Q9BZV3 1241 aa17.73■□□□□ 0.43
SREBF1-219ENST00000580540 SMG9Q9H0W8 520 aaKnown RBP17.73■□□□□ 0.43
SREBF1-219ENST00000580540 SDCBP2Q9H190 292 aa17.73■□□□□ 0.43
SREBF1-219ENST00000580540 HEBP1Q9NRV9 189 aa17.73■□□□□ 0.43
SREBF1-219ENST00000580540 UXTQ9UBK9 157 aaPredicted RBP17.73■□□□□ 0.43
SREBF1-219ENST00000580540 SIT1Q9Y3P8 196 aa17.73■□□□□ 0.43
SREBF1-219ENST00000580540 TRIM49BA6NDI0 452 aa17.72■□□□□ 0.43
SREBF1-219ENST00000580540 BIN1O00499 593 aa17.72■□□□□ 0.43
SREBF1-219ENST00000580540 CLDN5O00501 218 aa17.72■□□□□ 0.43
SREBF1-219ENST00000580540 NOL4O94818 638 aa17.72■□□□□ 0.43
SREBF1-219ENST00000580540 NUBP1P53384 320 aa17.72■□□□□ 0.43
SREBF1-219ENST00000580540 ORC1Q13415 861 aa17.72■□□□□ 0.43
SREBF1-219ENST00000580540 TCERG1LQ5VWI1 586 aa17.72■□□□□ 0.43
SREBF1-219ENST00000580540 TXNDC8Q6A555 127 aa17.72■□□□□ 0.43
SREBF1-219ENST00000580540 KLHL10Q6JEL2 608 aa17.72■□□□□ 0.43
SREBF1-219ENST00000580540 TMEM150AQ86TG1 271 aa17.72■□□□□ 0.43
SREBF1-219ENST00000580540 ADSSL1Q8N142 457 aa17.72■□□□□ 0.43
SREBF1-219ENST00000580540 CCDC150Q8NCX0 1101 aa17.72■□□□□ 0.43
SREBF1-219ENST00000580540 TAS1R2Q8TE23 839 aa17.72■□□□□ 0.43
SREBF1-219ENST00000580540 TAF4BQ92750 862 aa17.72■□□□□ 0.43
SREBF1-219ENST00000580540 ATOH1Q92858 354 aaPredicted RBP17.72■□□□□ 0.43
SREBF1-219ENST00000580540 B3GNT5Q9BYG0 378 aa17.72■□□□□ 0.43
SREBF1-219ENST00000580540 ZNF518BQ9C0D4 1074 aa17.72■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 86.7 ms