RNA–Protein interactions for RNA: ENST00000578178.5

PPP4R1-208, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 4

Gene PPP4R1, Length 468 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-208ENST00000578178 DNASE1L2Q92874 299 aa11.68□□□□□ -0.54
PPP4R1-208ENST00000578178 E2F7Q96AV8 911 aa11.68□□□□□ -0.54
PPP4R1-208ENST00000578178 SHDQ96IW2 340 aa11.68□□□□□ -0.54
PPP4R1-208ENST00000578178 MKNK1Q9BUB5 465 aa11.68□□□□□ -0.54
PPP4R1-208ENST00000578178 GTPBP4Q9BZE4 634 aaKnown RBP11.68□□□□□ -0.54
PPP4R1-208ENST00000578178 SMYD3Q9H7B4 428 aa11.68□□□□□ -0.54
PPP4R1-208ENST00000578178 NME7Q9Y5B8 376 aa11.68□□□□□ -0.54
PPP4R1-208ENST00000578178 PCDHA5Q9Y5H7 936 aa11.68□□□□□ -0.54
PPP4R1-208ENST00000578178 COL4A3Q01955 1670 aa11.68□□□□□ -0.54
PPP4R1-208ENST00000578178 NCANO14594 1321 aa11.67□□□□□ -0.54
PPP4R1-208ENST00000578178 A8MXQ7 604 aa11.67□□□□□ -0.54
PPP4R1-208ENST00000578178 GALR2O43603 387 aaPredicted RBP11.67□□□□□ -0.54
PPP4R1-208ENST00000578178 NOL4O94818 638 aa11.67□□□□□ -0.54
PPP4R1-208ENST00000578178 PDGFRBP09619 1106 aa11.67□□□□□ -0.54
PPP4R1-208ENST00000578178 TRIM49P0CI25 452 aa11.67□□□□□ -0.54
PPP4R1-208ENST00000578178 TRIM49CP0CI26 452 aa11.67□□□□□ -0.54
PPP4R1-208ENST00000578178 P4HA1P13674 534 aa11.67□□□□□ -0.54
PPP4R1-208ENST00000578178 HMGA1P17096 107 aaKnown RBP11.67□□□□□ -0.54
PPP4R1-208ENST00000578178 PSMC3P17980 439 aa11.67□□□□□ -0.54
PPP4R1-208ENST00000578178 GNL1P36915 607 aaPredicted RBP11.67□□□□□ -0.54
PPP4R1-208ENST00000578178 ANP32AP39687 249 aaKnown RBP11.67□□□□□ -0.54
PPP4R1-208ENST00000578178 VIPR2P41587 438 aa11.67□□□□□ -0.54
PPP4R1-208ENST00000578178 PRCPP42785 496 aa11.67□□□□□ -0.54
PPP4R1-208ENST00000578178 NLRP12P59046 1061 aa11.67□□□□□ -0.54
PPP4R1-208ENST00000578178 CYP27A1Q02318 531 aa11.67□□□□□ -0.54
PPP4R1-208ENST00000578178 NHLH1Q02575 133 aa11.67□□□□□ -0.54
PPP4R1-208ENST00000578178 PRKCQQ04759 706 aa11.67□□□□□ -0.54
PPP4R1-208ENST00000578178 ADAM9Q13443 819 aa11.67□□□□□ -0.54
PPP4R1-208ENST00000578178 GRM2Q14416 872 aa11.67□□□□□ -0.54
PPP4R1-208ENST00000578178 DDR2Q16832 855 aa11.67□□□□□ -0.54
PPP4R1-208ENST00000578178 MDH1BQ5I0G3 518 aa11.67□□□□□ -0.54
PPP4R1-208ENST00000578178 C1orf220Q5T0J3 134 aa11.67□□□□□ -0.54
PPP4R1-208ENST00000578178 SDHAF4Q5VUM1 108 aa11.67□□□□□ -0.54
PPP4R1-208ENST00000578178 VSTM1Q6UX27 236 aa11.67□□□□□ -0.54
PPP4R1-208ENST00000578178 SCARA5Q6ZMJ2 495 aa11.67□□□□□ -0.54
PPP4R1-208ENST00000578178 SCN4BQ8IWT1 228 aa11.67□□□□□ -0.54
PPP4R1-208ENST00000578178 STKLD1Q8NE28 680 aa11.67□□□□□ -0.54
PPP4R1-208ENST00000578178 MYCBPAPQ8TBZ2 947 aa11.67□□□□□ -0.54
PPP4R1-208ENST00000578178 TAF4BQ92750 862 aa11.67□□□□□ -0.54
PPP4R1-208ENST00000578178 ERCC4Q92889 916 aaPredicted RBP11.67□□□□□ -0.54
PPP4R1-208ENST00000578178 TRMT2BQ96GJ1 504 aaKnown RBP11.67□□□□□ -0.54
PPP4R1-208ENST00000578178 PCED1BQ96HM7 432 aa11.67□□□□□ -0.54
PPP4R1-208ENST00000578178 TSG101Q99816 390 aa11.67□□□□□ -0.54
PPP4R1-208ENST00000578178 TRMT61BQ9BVS5 477 aaKnown RBP11.67□□□□□ -0.54
PPP4R1-208ENST00000578178 TASP1Q9H6P5 420 aa11.67□□□□□ -0.54
PPP4R1-208ENST00000578178 BRD9Q9H8M2 597 aa11.67□□□□□ -0.54
PPP4R1-208ENST00000578178 CHMP5Q9NZZ3 219 aa11.67□□□□□ -0.54
PPP4R1-208ENST00000578178 MAGEC2Q9UBF1 373 aaPredicted RBP11.67□□□□□ -0.54
PPP4R1-208ENST00000578178 UXTQ9UBK9 157 aaPredicted RBP11.67□□□□□ -0.54
PPP4R1-208ENST00000578178 ZMYM5Q9UJ78 669 aa11.67□□□□□ -0.54
PPP4R1-208ENST00000578178 MAGED2Q9UNF1 606 aaPredicted RBP11.67□□□□□ -0.54
PPP4R1-208ENST00000578178 ZNF638Q14966 1978 aaKnown RBP11.67□□□□□ -0.54
PPP4R1-208ENST00000578178 SLC38A8A6NNN8 435 aa11.66□□□□□ -0.54
PPP4R1-208ENST00000578178 HEPACAM2A8MVW5 462 aa11.66□□□□□ -0.54
PPP4R1-208ENST00000578178 STK25O00506 426 aa11.66□□□□□ -0.54
PPP4R1-208ENST00000578178 CETN3O15182 167 aa11.66□□□□□ -0.54
PPP4R1-208ENST00000578178 GADD45BO75293 160 aaPredicted RBP11.66□□□□□ -0.54
PPP4R1-208ENST00000578178 TADA3O75528 432 aa11.66□□□□□ -0.54
PPP4R1-208ENST00000578178 ASS1P00966 412 aaKnown RBP11.66□□□□□ -0.54
PPP4R1-208ENST00000578178 HLA-DRAP01903 254 aa11.66□□□□□ -0.54
PPP4R1-208ENST00000578178 F11P03951 625 aa11.66□□□□□ -0.54
PPP4R1-208ENST00000578178 EPB41P11171 864 aaKnown RBP11.66□□□□□ -0.54
PPP4R1-208ENST00000578178 DDX6P26196 483 aaKnown RBP eCLIP11.66□□□□□ -0.54
PPP4R1-208ENST00000578178 RAP1GAPP47736 663 aa11.66□□□□□ -0.54
PPP4R1-208ENST00000578178 STARD6P59095 220 aa11.66□□□□□ -0.54
PPP4R1-208ENST00000578178 TCF15Q12870 199 aa11.66□□□□□ -0.54
PPP4R1-208ENST00000578178 SGSM1Q2NKQ1 1148 aa11.66□□□□□ -0.54
PPP4R1-208ENST00000578178 SLC44A4Q53GD3 710 aa11.66□□□□□ -0.54
PPP4R1-208ENST00000578178 TMEM150AQ86TG1 271 aa11.66□□□□□ -0.54
PPP4R1-208ENST00000578178 ARID3BQ8IVW6 561 aaPredicted RBP11.66□□□□□ -0.54
PPP4R1-208ENST00000578178 MFSD6LQ8IWD5 586 aa11.66□□□□□ -0.54
PPP4R1-208ENST00000578178 CCDC105Q8IYK2 499 aa11.66□□□□□ -0.54
PPP4R1-208ENST00000578178 B3GALNT2Q8NCR0 500 aa11.66□□□□□ -0.54
PPP4R1-208ENST00000578178 PJA1Q8NG27 643 aa11.66□□□□□ -0.54
PPP4R1-208ENST00000578178 IRF7Q92985 503 aa11.66□□□□□ -0.54
PPP4R1-208ENST00000578178 RSPRY1Q96DX4 576 aa11.66□□□□□ -0.54
PPP4R1-208ENST00000578178 MYRFLQ96LU7 910 aa11.66□□□□□ -0.54
PPP4R1-208ENST00000578178 CEP295NLQ96MC4 621 aa11.66□□□□□ -0.54
PPP4R1-208ENST00000578178 DDX23Q9BUQ8 820 aaKnown RBP11.66□□□□□ -0.54
PPP4R1-208ENST00000578178 IMPG2Q9BZV3 1241 aa11.66□□□□□ -0.54
PPP4R1-208ENST00000578178 ELOVL4Q9GZR5 314 aa11.66□□□□□ -0.54
PPP4R1-208ENST00000578178 DPEP3Q9H4B8 488 aa11.66□□□□□ -0.54
PPP4R1-208ENST00000578178 OBP2AQ9NY56 170 aa11.66□□□□□ -0.54
PPP4R1-208ENST00000578178 ANAPC1Q9H1A4 1944 aa11.66□□□□□ -0.54
PPP4R1-208ENST00000578178 WDFY4Q6ZS81 3184 aa11.65□□□□□ -0.54
PPP4R1-208ENST00000578178 ATP8B3O60423 1300 aa11.65□□□□□ -0.54
PPP4R1-208ENST00000578178 DPYSL4O14531 572 aa11.65□□□□□ -0.54
PPP4R1-208ENST00000578178 PSMA7O14818 248 aa11.65□□□□□ -0.54
PPP4R1-208ENST00000578178 TRIM66O15016 1216 aa11.65□□□□□ -0.54
PPP4R1-208ENST00000578178 SLC16A3O15427 465 aaKnown RBP11.65□□□□□ -0.54
PPP4R1-208ENST00000578178 PI15O43692 258 aa11.65□□□□□ -0.54
PPP4R1-208ENST00000578178 PRAMEF12O95522 483 aa11.65□□□□□ -0.54
PPP4R1-208ENST00000578178 PTPN1P18031 435 aaKnown RBP11.65□□□□□ -0.54
PPP4R1-208ENST00000578178 BDNFP23560 247 aa11.65□□□□□ -0.54
PPP4R1-208ENST00000578178 ANXA13P27216 316 aa11.65□□□□□ -0.54
PPP4R1-208ENST00000578178 WEE1P30291 646 aa11.65□□□□□ -0.54
PPP4R1-208ENST00000578178 GDI1P31150 447 aa11.65□□□□□ -0.54
PPP4R1-208ENST00000578178 GTF2H1P32780 548 aa11.65□□□□□ -0.54
PPP4R1-208ENST00000578178 PPP1R2P41236 205 aa11.65□□□□□ -0.54
PPP4R1-208ENST00000578178 ASPAP45381 313 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms