RNA–Protein interactions for RNA: ENST00000577539.1

VAPA-203, Transcript of VAMP associated protein A, humanhuman

Gene VAPA, Length 3,760 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-203ENST00000577539 COL9A2Q14055 689 aaPredicted RBP5.68□□□□□ -1.5
VAPA-203ENST00000577539 LONRF1Q17RB8 773 aa5.68□□□□□ -1.5
VAPA-203ENST00000577539 SEZ6Q53EL9 994 aa5.68□□□□□ -1.5
VAPA-203ENST00000577539 BRDTQ58F21 947 aaPredicted RBP5.68□□□□□ -1.5
VAPA-203ENST00000577539 UBAP2Q5T6F2 1119 aaKnown RBP5.68□□□□□ -1.5
VAPA-203ENST00000577539 KAZNQ674X7 775 aa5.68□□□□□ -1.5
VAPA-203ENST00000577539 ZNF365Q70YC5 407 aa5.68□□□□□ -1.5
VAPA-203ENST00000577539 FAM83AQ86UY5 434 aa5.68□□□□□ -1.5
VAPA-203ENST00000577539 ZDHHC14Q8IZN3 488 aa5.68□□□□□ -1.5
VAPA-203ENST00000577539 GPD1LQ8N335 351 aa5.68□□□□□ -1.5
VAPA-203ENST00000577539 RNF166Q96A37 237 aaPredicted RBP5.68□□□□□ -1.5
VAPA-203ENST00000577539 SCLT1Q96NL6 688 aa5.68□□□□□ -1.5
VAPA-203ENST00000577539 STRA6Q9BX79 667 aa5.68□□□□□ -1.5
VAPA-203ENST00000577539 POLR3FQ9H1D9 316 aaPredicted RBP5.68□□□□□ -1.5
VAPA-203ENST00000577539 RUBCNLQ9H714 662 aa5.68□□□□□ -1.5
VAPA-203ENST00000577539 ANKEF1Q9NU02 776 aa5.68□□□□□ -1.5
VAPA-203ENST00000577539 TBK1Q9UHD2 729 aa5.68□□□□□ -1.5
VAPA-203ENST00000577539 DDX20Q9UHI6 824 aaKnown RBP5.68□□□□□ -1.5
VAPA-203ENST00000577539 SLC12A6Q9UHW9 1150 aa5.68□□□□□ -1.5
VAPA-203ENST00000577539 NOCTQ9UK39 431 aaKnown RBP5.68□□□□□ -1.5
VAPA-203ENST00000577539 SBDSQ9Y3A5 250 aaKnown RBP eCLIP5.68□□□□□ -1.5
VAPA-203ENST00000577539 PCDHB4Q9Y5E5 795 aa5.68□□□□□ -1.5
VAPA-203ENST00000577539 CD2APQ9Y5K6 639 aa5.68□□□□□ -1.5
VAPA-203ENST00000577539 IFRD1O00458 451 aaPredicted RBP5.68□□□□□ -1.5
VAPA-203ENST00000577539 TRAPPC3O43617 180 aa5.68□□□□□ -1.5
VAPA-203ENST00000577539 GAS8O95995 478 aa5.68□□□□□ -1.5
VAPA-203ENST00000577539 MAPTP10636 758 aaKnown RBP5.68□□□□□ -1.5
VAPA-203ENST00000577539 HMGCS2P54868 508 aa5.68□□□□□ -1.5
VAPA-203ENST00000577539 CYP24A1Q07973 514 aa5.68□□□□□ -1.5
VAPA-203ENST00000577539 SLC20A2Q08357 652 aa5.68□□□□□ -1.5
VAPA-203ENST00000577539 TNFAIP1Q13829 316 aa5.68□□□□□ -1.5
VAPA-203ENST00000577539 ACAD10Q6JQN1 1059 aa5.68□□□□□ -1.5
VAPA-203ENST00000577539 TMEM270Q6UE05 265 aa5.68□□□□□ -1.5
VAPA-203ENST00000577539 ZDHHC24Q6UX98 284 aa5.68□□□□□ -1.5
VAPA-203ENST00000577539 MMS22LQ6ZRQ5 1243 aa5.68□□□□□ -1.5
VAPA-203ENST00000577539 DEPTORQ8TB45 409 aa5.68□□□□□ -1.5
VAPA-203ENST00000577539 GATAD2BQ8WXI9 593 aa5.68□□□□□ -1.5
VAPA-203ENST00000577539 ZKSCAN4Q969J2 545 aaPredicted RBP5.68□□□□□ -1.5
VAPA-203ENST00000577539 RELTQ969Z4 430 aa5.68□□□□□ -1.5
VAPA-203ENST00000577539 WNK4Q96J92 1243 aa5.68□□□□□ -1.5
VAPA-203ENST00000577539 PAIP2Q9BPZ3 127 aaKnown RBP5.68□□□□□ -1.5
VAPA-203ENST00000577539 ELAC2Q9BQ52 826 aaKnown RBP5.68□□□□□ -1.5
VAPA-203ENST00000577539 PICK1Q9NRD5 415 aa5.68□□□□□ -1.5
VAPA-203ENST00000577539 ZDHHC18Q9NUE0 388 aa5.68□□□□□ -1.5
VAPA-203ENST00000577539 KLHL11Q9NVR0 708 aa5.68□□□□□ -1.5
VAPA-203ENST00000577539 UVRAGQ9P2Y5 699 aa5.68□□□□□ -1.5
VAPA-203ENST00000577539 TELO2Q9Y4R8 837 aa5.68□□□□□ -1.5
VAPA-203ENST00000577539 SLX4Q8IY92 1834 aa5.68□□□□□ -1.5
VAPA-203ENST00000577539 THAP12O43422 761 aa5.67□□□□□ -1.5
VAPA-203ENST00000577539 ZNF862O60290 1169 aa5.67□□□□□ -1.5
VAPA-203ENST00000577539 PLA2G6O60733 806 aa5.67□□□□□ -1.5
VAPA-203ENST00000577539 GJB6O95452 261 aa5.67□□□□□ -1.5
VAPA-203ENST00000577539 PSAPP07602 524 aa5.67□□□□□ -1.5
VAPA-203ENST00000577539 CES1P23141 567 aa5.67□□□□□ -1.5
VAPA-203ENST00000577539 HNRNPH1P31943 449 aaKnown RBP5.67□□□□□ -1.5
VAPA-203ENST00000577539 PEX5P50542 639 aa5.67□□□□□ -1.5
VAPA-203ENST00000577539 PRKCEQ02156 737 aa5.67□□□□□ -1.5
VAPA-203ENST00000577539 SLMAPQ14BN4 828 aa5.67□□□□□ -1.5
VAPA-203ENST00000577539 NFE2Q16621 373 aaPredicted RBP5.67□□□□□ -1.5
VAPA-203ENST00000577539 C6orf118Q5T5N4 469 aa5.67□□□□□ -1.5
VAPA-203ENST00000577539 NBPF12Q5TAG4 269 aaPredicted RBP5.67□□□□□ -1.5
VAPA-203ENST00000577539 ICE2Q659A1 982 aa5.67□□□□□ -1.5
VAPA-203ENST00000577539 CCSAPQ6IQ19 270 aaPredicted RBP5.67□□□□□ -1.5
VAPA-203ENST00000577539 SEPT14Q6ZU15 432 aa5.67□□□□□ -1.5
VAPA-203ENST00000577539 NIPA1Q7RTP0 329 aa5.67□□□□□ -1.5
VAPA-203ENST00000577539 MAP4K3Q8IVH8 894 aa5.67□□□□□ -1.5
VAPA-203ENST00000577539 C12orf56Q8IXR9 622 aa5.67□□□□□ -1.5
VAPA-203ENST00000577539 TMEM102Q8N9M5 508 aaPredicted RBP5.67□□□□□ -1.5
VAPA-203ENST00000577539 SLC17A8Q8NDX2 589 aa5.67□□□□□ -1.5
VAPA-203ENST00000577539 CHMP6Q96FZ7 201 aa5.67□□□□□ -1.5
VAPA-203ENST00000577539 DDX23Q9BUQ8 820 aaKnown RBP5.67□□□□□ -1.5
VAPA-203ENST00000577539 KIAA1683Q9H0B3 1180 aa5.67□□□□□ -1.5
VAPA-203ENST00000577539 CNOT10Q9H9A5 744 aaKnown RBP5.67□□□□□ -1.5
VAPA-203ENST00000577539 CHST7Q9NS84 486 aa5.67□□□□□ -1.5
VAPA-203ENST00000577539 GRHL1Q9NZI5 618 aa5.67□□□□□ -1.5
VAPA-203ENST00000577539 SAMD15Q9P1V8 674 aa5.67□□□□□ -1.5
VAPA-203ENST00000577539 STRIP2Q9ULQ0 834 aa5.67□□□□□ -1.5
VAPA-203ENST00000577539 DYRK1BQ9Y463 629 aa5.67□□□□□ -1.5
VAPA-203ENST00000577539 PRKAB1Q9Y478 270 aa5.67□□□□□ -1.5
VAPA-203ENST00000577539 PCDHA3Q9Y5H8 950 aa5.67□□□□□ -1.5
VAPA-203ENST00000577539 ANKRD31Q8N7Z5 1873 aa5.67□□□□□ -1.5
VAPA-203ENST00000577539 PI4K2BG5E9Z4 385 aa5.67□□□□□ -1.5
VAPA-203ENST00000577539 DKC1O60832 514 aaKnown RBP eCLIP5.67□□□□□ -1.5
VAPA-203ENST00000577539 GGPS1O95749 300 aa5.67□□□□□ -1.5
VAPA-203ENST00000577539 HLA-DRAP01903 254 aa5.67□□□□□ -1.5
VAPA-203ENST00000577539 ATF2P15336 505 aa5.67□□□□□ -1.5
VAPA-203ENST00000577539 ATF7P17544 494 aaPredicted RBP5.67□□□□□ -1.5
VAPA-203ENST00000577539 RDXP35241 583 aaKnown RBP5.67□□□□□ -1.5
VAPA-203ENST00000577539 CETN2P41208 172 aa5.67□□□□□ -1.5
VAPA-203ENST00000577539 NCKAP1LP55160 1127 aa5.67□□□□□ -1.5
VAPA-203ENST00000577539 ADCY2Q08462 1091 aa5.67□□□□□ -1.5
VAPA-203ENST00000577539 ZKSCAN8Q15776 578 aaPredicted RBP5.67□□□□□ -1.5
VAPA-203ENST00000577539 KYNUQ16719 465 aa5.67□□□□□ -1.5
VAPA-203ENST00000577539 LIN9Q5TKA1 542 aa5.67□□□□□ -1.5
VAPA-203ENST00000577539 CYP4F22Q6NT55 531 aa5.67□□□□□ -1.5
VAPA-203ENST00000577539 ANKS4BQ8N8V4 417 aa5.67□□□□□ -1.5
VAPA-203ENST00000577539 CCDC197Q8NCU1 140 aa5.67□□□□□ -1.5
VAPA-203ENST00000577539 C1orf131Q8NDD1 294 aaKnown RBP5.67□□□□□ -1.5
VAPA-203ENST00000577539 MCPH1Q8NEM0 835 aa5.67□□□□□ -1.5
VAPA-203ENST00000577539 AGBL3Q8NEM8 1001 aa5.67□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms