RNA–Protein interactions for RNA: ENST00000572365.1

SF3B3-214, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 4

Gene SF3B3, Length 575 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-214ENST00000572365 HOXB7P09629 217 aa6.4□□□□□ -1.38
SF3B3-214ENST00000572365 CD69Q07108 199 aa6.4□□□□□ -1.38
SF3B3-214ENST00000572365 MGAT5Q09328 741 aa6.4□□□□□ -1.38
SF3B3-214ENST00000572365 LMOD3Q0VAK6 560 aa6.4□□□□□ -1.38
SF3B3-214ENST00000572365 MGAT2Q10469 447 aa6.4□□□□□ -1.38
SF3B3-214ENST00000572365 ZNF267Q14586 743 aaPredicted RBP6.4□□□□□ -1.38
SF3B3-214ENST00000572365 VWA3BQ502W6 1294 aa6.4□□□□□ -1.38
SF3B3-214ENST00000572365 FAM47AQ5JRC9 791 aa6.4□□□□□ -1.38
SF3B3-214ENST00000572365 SLC44A5Q8NCS7 719 aa6.4□□□□□ -1.38
SF3B3-214ENST00000572365 NUDT10Q8NFP7 164 aa6.4□□□□□ -1.38
SF3B3-214ENST00000572365 NRG4Q8WWG1 115 aa6.4□□□□□ -1.38
SF3B3-214ENST00000572365 NUDT11Q96G61 164 aa6.4□□□□□ -1.38
SF3B3-214ENST00000572365 FAM84AQ96KN4 292 aa6.4□□□□□ -1.38
SF3B3-214ENST00000572365 YTHDC1Q96MU7 727 aaKnown RBP6.4□□□□□ -1.38
SF3B3-214ENST00000572365 PWWP2AQ96N64 755 aa6.4□□□□□ -1.38
SF3B3-214ENST00000572365 KATNBL1Q9H079 304 aa6.4□□□□□ -1.38
SF3B3-214ENST00000572365 PNNQ9H307 717 aaKnown RBP6.4□□□□□ -1.38
SF3B3-214ENST00000572365 L2HGDHQ9H9P8 463 aa6.4□□□□□ -1.38
SF3B3-214ENST00000572365 SLC28A3Q9HAS3 691 aa6.4□□□□□ -1.38
SF3B3-214ENST00000572365 ARNT2Q9HBZ2 717 aa6.4□□□□□ -1.38
SF3B3-214ENST00000572365 DMRT3Q9NQL9 472 aa6.4□□□□□ -1.38
SF3B3-214ENST00000572365 RBM12Q9NTZ6 932 aaKnown RBP6.4□□□□□ -1.38
SF3B3-214ENST00000572365 NTMQ9P121 344 aa6.4□□□□□ -1.38
SF3B3-214ENST00000572365 MORF4L1Q9UBU8 362 aa6.4□□□□□ -1.38
SF3B3-214ENST00000572365 RPAP1Q9BWH6 1393 aaPredicted RBP6.4□□□□□ -1.39
SF3B3-214ENST00000572365 DDX3XO00571 662 aaKnown RBP eCLIP6.39□□□□□ -1.39
SF3B3-214ENST00000572365 KIAA0355O15063 1070 aa6.39□□□□□ -1.39
SF3B3-214ENST00000572365 MAP4K4O95819 1239 aaPredicted RBP6.39□□□□□ -1.39
SF3B3-214ENST00000572365 KRT18P05783 430 aaKnown RBP6.39□□□□□ -1.39
SF3B3-214ENST00000572365 GAAP10253 952 aa6.39□□□□□ -1.39
SF3B3-214ENST00000572365 PI3P19957 117 aa6.39□□□□□ -1.39
SF3B3-214ENST00000572365 MAPK4P31152 587 aa6.39□□□□□ -1.39
SF3B3-214ENST00000572365 CYP2C18P33260 490 aa6.39□□□□□ -1.39
SF3B3-214ENST00000572365 SESN2P58004 480 aaPredicted RBP6.39□□□□□ -1.39
SF3B3-214ENST00000572365 ARHGAP29Q52LW3 1261 aa6.39□□□□□ -1.39
SF3B3-214ENST00000572365 CAVIN4Q5BKX8 364 aa6.39□□□□□ -1.39
SF3B3-214ENST00000572365 METTL24Q5JXM2 366 aa6.39□□□□□ -1.39
SF3B3-214ENST00000572365 CCDC30Q5VVM6 783 aa6.39□□□□□ -1.39
SF3B3-214ENST00000572365 MCTP1Q6DN14 999 aa6.39□□□□□ -1.39
SF3B3-214ENST00000572365 KLHDC10Q6PID8 442 aa6.39□□□□□ -1.39
SF3B3-214ENST00000572365 Q6ZUG5 572 aa6.39□□□□□ -1.39
SF3B3-214ENST00000572365 REXO1L1PQ8IX06 675 aa6.39□□□□□ -1.39
SF3B3-214ENST00000572365 UNC5BQ8IZJ1 945 aa6.39□□□□□ -1.39
SF3B3-214ENST00000572365 TBC1D22AQ8WUA7 517 aa6.39□□□□□ -1.39
SF3B3-214ENST00000572365 SOCS4Q8WXH5 440 aa6.39□□□□□ -1.39
SF3B3-214ENST00000572365 GFM2Q969S9 779 aaKnown RBP6.39□□□□□ -1.39
SF3B3-214ENST00000572365 MVB12AQ96EY5 273 aa6.39□□□□□ -1.39
SF3B3-214ENST00000572365 MAP3K14Q99558 947 aa6.39□□□□□ -1.39
SF3B3-214ENST00000572365 ADI1Q9BV57 179 aa6.39□□□□□ -1.39
SF3B3-214ENST00000572365 KRTAP9-9Q9BYP9 154 aa6.39□□□□□ -1.39
SF3B3-214ENST00000572365 KRTAP9-4Q9BYQ2 154 aa6.39□□□□□ -1.39
SF3B3-214ENST00000572365 C1orf112Q9NSG2 853 aa6.39□□□□□ -1.39
SF3B3-214ENST00000572365 ATRNL1Q5VV63 1379 aa6.39□□□□□ -1.39
SF3B3-214ENST00000572365 RIF1Q5UIP0 2472 aaKnown RBP6.39□□□□□ -1.39
SF3B3-214ENST00000572365 DMDP11532 3685 aa6.39□□□□□ -1.39
SF3B3-214ENST00000572365 LOC285556D6RIA3 1793 aa6.39□□□□□ -1.39
SF3B3-214ENST00000572365 CFAP47Q6ZTR5 3102 aa6.39□□□□□ -1.39
SF3B3-214ENST00000572365 SCN5AQ14524 2016 aa6.38□□□□□ -1.39
SF3B3-214ENST00000572365 CCDC154A6NI56 674 aa6.38□□□□□ -1.39
SF3B3-214ENST00000572365 DTNBO60941 627 aa6.38□□□□□ -1.39
SF3B3-214ENST00000572365 CNMDO75829 334 aa6.38□□□□□ -1.39
SF3B3-214ENST00000572365 CYBAP13498 195 aa6.38□□□□□ -1.39
SF3B3-214ENST00000572365 HNRNPLP14866 589 aaKnown RBP eCLIP6.38□□□□□ -1.39
SF3B3-214ENST00000572365 GSPT1P15170 499 aaKnown RBP6.38□□□□□ -1.39
SF3B3-214ENST00000572365 CTSSP25774 331 aa6.38□□□□□ -1.39
SF3B3-214ENST00000572365 STAT5BP51692 787 aa6.38□□□□□ -1.39
SF3B3-214ENST00000572365 GRM3Q14832 879 aa6.38□□□□□ -1.39
SF3B3-214ENST00000572365 AAK1Q2M2I8 961 aa6.38□□□□□ -1.39
SF3B3-214ENST00000572365 MAP9Q49MG5 647 aa6.38□□□□□ -1.39
SF3B3-214ENST00000572365 ATG14Q6ZNE5 492 aa6.38□□□□□ -1.39
SF3B3-214ENST00000572365 DPP9Q86TI2 863 aa6.38□□□□□ -1.39
SF3B3-214ENST00000572365 GPR156Q8NFN8 814 aa6.38□□□□□ -1.39
SF3B3-214ENST00000572365 RIN2Q8WYP3 895 aaPredicted RBP6.38□□□□□ -1.39
SF3B3-214ENST00000572365 HOXB13Q92826 284 aaPredicted RBP6.38□□□□□ -1.39
SF3B3-214ENST00000572365 AJUBAQ96IF1 538 aa6.38□□□□□ -1.39
SF3B3-214ENST00000572365 PPP1R16BQ96T49 567 aa6.38□□□□□ -1.39
SF3B3-214ENST00000572365 MRIQ9BWK5 157 aa6.38□□□□□ -1.39
SF3B3-214ENST00000572365 INTUQ9ULD6 942 aa6.38□□□□□ -1.39
SF3B3-214ENST00000572365 CNOT6Q9ULM6 557 aaKnown RBP6.38□□□□□ -1.39
SF3B3-214ENST00000572365 DNM3Q9UQ16 869 aa6.38□□□□□ -1.39
SF3B3-214ENST00000572365 KCTD3Q9Y597 815 aa6.38□□□□□ -1.39
SF3B3-214ENST00000572365 MTCH2Q9Y6C9 303 aa6.38□□□□□ -1.39
SF3B3-214ENST00000572365 DMXL1Q9Y485 3027 aa6.38□□□□□ -1.39
SF3B3-214ENST00000572365 MCM3APO60318 1980 aa6.37□□□□□ -1.39
SF3B3-214ENST00000572365 UTYO14607 1347 aa6.37□□□□□ -1.39
SF3B3-214ENST00000572365 UMODL1Q5DID0 1318 aa6.37□□□□□ -1.39
SF3B3-214ENST00000572365 FAM171A2A8MVW0 826 aa6.37□□□□□ -1.39
SF3B3-214ENST00000572365 TIMP1P01033 207 aa6.37□□□□□ -1.39
SF3B3-214ENST00000572365 MYL1P05976 194 aa6.37□□□□□ -1.39
SF3B3-214ENST00000572365 LTA4HP09960 611 aaKnown RBP6.37□□□□□ -1.39
SF3B3-214ENST00000572365 CCL23P55773 120 aa6.37□□□□□ -1.39
SF3B3-214ENST00000572365 PGS1Q32NB8 556 aa6.37□□□□□ -1.39
SF3B3-214ENST00000572365 C19orf54Q5BKX5 351 aa6.37□□□□□ -1.39
SF3B3-214ENST00000572365 FAM180AQ6UWF9 173 aa6.37□□□□□ -1.39
SF3B3-214ENST00000572365 LARP4Q71RC2 724 aaKnown RBP eCLIP6.37□□□□□ -1.39
SF3B3-214ENST00000572365 CLEC14AQ86T13 490 aa6.37□□□□□ -1.39
SF3B3-214ENST00000572365 GRAMD1CQ8IYS0 662 aa6.37□□□□□ -1.39
SF3B3-214ENST00000572365 PIK3C3Q8NEB9 887 aa6.37□□□□□ -1.39
SF3B3-214ENST00000572365 BHLHE22Q8NFJ8 381 aaPredicted RBP6.37□□□□□ -1.39
SF3B3-214ENST00000572365 OR2I1PQ8NGU4 316 aa6.37□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms