RNA–Protein interactions for RNA: ENST00000560777.5

RABGGTA-218, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5 BASIC

Gene RABGGTA, Length 1,197 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-218ENST00000560777 TBXAS1P24557 533 aaPredicted RBP12.72□□□□□ -0.37
RABGGTA-218ENST00000560777 RAD23BP54727 409 aa12.72□□□□□ -0.37
RABGGTA-218ENST00000560777 EPHB3P54753 998 aa12.72□□□□□ -0.37
RABGGTA-218ENST00000560777 NTHL1P78549 312 aa12.72□□□□□ -0.37
RABGGTA-218ENST00000560777 CYP27A1Q02318 531 aa12.72□□□□□ -0.37
RABGGTA-218ENST00000560777 APBA1Q02410 837 aa12.72□□□□□ -0.37
RABGGTA-218ENST00000560777 KCNMA1Q12791 1236 aa12.72□□□□□ -0.37
RABGGTA-218ENST00000560777 DDR2Q16832 855 aa12.72□□□□□ -0.37
RABGGTA-218ENST00000560777 EXOC3L4Q17RC7 722 aa12.72□□□□□ -0.37
RABGGTA-218ENST00000560777 ZNF394Q53GI3 561 aa12.72□□□□□ -0.37
RABGGTA-218ENST00000560777 DPY19L2P1Q6NXN4 242 aa12.72□□□□□ -0.37
RABGGTA-218ENST00000560777 TRIM65Q6PJ69 517 aa12.72□□□□□ -0.37
RABGGTA-218ENST00000560777 C4orf50Q6ZRC1 276 aa12.72□□□□□ -0.37
RABGGTA-218ENST00000560777 PAQR9Q6ZVX9 377 aa12.72□□□□□ -0.37
RABGGTA-218ENST00000560777 APTXQ7Z2E3 356 aaKnown RBP12.72□□□□□ -0.37
RABGGTA-218ENST00000560777 PPM1KQ8N3J5 372 aa12.72□□□□□ -0.37
RABGGTA-218ENST00000560777 TTC39CQ8N584 583 aa12.72□□□□□ -0.37
RABGGTA-218ENST00000560777 UBR7Q8N806 425 aa12.72□□□□□ -0.37
RABGGTA-218ENST00000560777 C12orf29Q8N999 325 aa12.72□□□□□ -0.37
RABGGTA-218ENST00000560777 ZNF512Q96ME7 567 aaPredicted RBP12.72□□□□□ -0.37
RABGGTA-218ENST00000560777 PHF7Q9BWX1 381 aaPredicted RBP12.72□□□□□ -0.37
RABGGTA-218ENST00000560777 CBX8Q9HC52 389 aa12.72□□□□□ -0.37
RABGGTA-218ENST00000560777 C2orf16Q68DN1 1984 aa12.72□□□□□ -0.37
RABGGTA-218ENST00000560777 CLDN5O00501 218 aa12.71□□□□□ -0.37
RABGGTA-218ENST00000560777 PES1O00541 588 aaKnown RBP12.71□□□□□ -0.37
RABGGTA-218ENST00000560777 CAVIN2O95810 425 aa12.71□□□□□ -0.37
RABGGTA-218ENST00000560777 MAGEA11P43364 429 aa12.71□□□□□ -0.37
RABGGTA-218ENST00000560777 GPR15P49685 360 aa12.71□□□□□ -0.37
RABGGTA-218ENST00000560777 COPB1P53618 953 aaKnown RBP12.71□□□□□ -0.37
RABGGTA-218ENST00000560777 GCNT1Q02742 428 aa12.71□□□□□ -0.37
RABGGTA-218ENST00000560777 PLD1Q13393 1074 aa12.71□□□□□ -0.37
RABGGTA-218ENST00000560777 SDHAF4Q5VUM1 108 aa12.71□□□□□ -0.37
RABGGTA-218ENST00000560777 GJB7Q6PEY0 223 aa12.71□□□□□ -0.37
RABGGTA-218ENST00000560777 VSTM1Q6UX27 236 aa12.71□□□□□ -0.37
RABGGTA-218ENST00000560777 DNAJB7Q7Z6W7 309 aaPredicted RBP12.71□□□□□ -0.37
RABGGTA-218ENST00000560777 HS6ST3Q8IZP7 471 aa12.71□□□□□ -0.37
RABGGTA-218ENST00000560777 FUKQ8N0W3 1084 aa12.71□□□□□ -0.37
RABGGTA-218ENST00000560777 SLC4A11Q8NBS3 891 aa12.71□□□□□ -0.37
RABGGTA-218ENST00000560777 GPR152Q8TDT2 470 aa12.71□□□□□ -0.37
RABGGTA-218ENST00000560777 GIPC2Q8TF65 315 aa12.71□□□□□ -0.37
RABGGTA-218ENST00000560777 PSMG2Q969U7 264 aa12.71□□□□□ -0.37
RABGGTA-218ENST00000560777 TMEM176AQ96HP8 235 aa12.71□□□□□ -0.37
RABGGTA-218ENST00000560777 KREMEN1Q96MU8 473 aa12.71□□□□□ -0.37
RABGGTA-218ENST00000560777 CORO1BQ9BR76 489 aa12.71□□□□□ -0.37
RABGGTA-218ENST00000560777 LRRC3Q9BY71 257 aa12.71□□□□□ -0.37
RABGGTA-218ENST00000560777 ZNF518BQ9C0D4 1074 aa12.71□□□□□ -0.37
RABGGTA-218ENST00000560777 SIX2Q9NPC8 291 aa12.71□□□□□ -0.37
RABGGTA-218ENST00000560777 UBE2TQ9NPD8 197 aaPredicted RBP12.71□□□□□ -0.37
RABGGTA-218ENST00000560777 PRKAG3Q9UGI9 489 aa12.71□□□□□ -0.37
RABGGTA-218ENST00000560777 VCANP13611 3396 aa12.71□□□□□ -0.38
RABGGTA-218ENST00000560777 NOTCH4Q99466 2003 aa12.71□□□□□ -0.38
RABGGTA-218ENST00000560777 CLUHO75153 1309 aa12.7□□□□□ -0.38
RABGGTA-218ENST00000560777 BECN2A8MW95 431 aa12.7□□□□□ -0.38
RABGGTA-218ENST00000560777 RNF225M0QZC1 329 aaPredicted RBP12.7□□□□□ -0.38
RABGGTA-218ENST00000560777 RHOP08100 348 aa12.7□□□□□ -0.38
RABGGTA-218ENST00000560777 CCDC130P13994 396 aa12.7□□□□□ -0.38
RABGGTA-218ENST00000560777 GRIK1P39086 918 aa12.7□□□□□ -0.38
RABGGTA-218ENST00000560777 CACNA2D1P54289 1103 aa12.7□□□□□ -0.38
RABGGTA-218ENST00000560777 YWHAEP62258 255 aaKnown RBP12.7□□□□□ -0.38
RABGGTA-218ENST00000560777 RPL10AP62906 217 aaKnown RBP12.7□□□□□ -0.38
RABGGTA-218ENST00000560777 PABPC1LQ4VXU2 614 aaKnown RBP12.7□□□□□ -0.38
RABGGTA-218ENST00000560777 IQCEQ6IPM2 695 aa12.7□□□□□ -0.38
RABGGTA-218ENST00000560777 LRSAM1Q6UWE0 723 aa12.7□□□□□ -0.38
RABGGTA-218ENST00000560777 LUZP1Q86V48 1076 aa12.7□□□□□ -0.38
RABGGTA-218ENST00000560777 SCN4BQ8IWT1 228 aa12.7□□□□□ -0.38
RABGGTA-218ENST00000560777 ADHFE1Q8IWW8 467 aa12.7□□□□□ -0.38
RABGGTA-218ENST00000560777 ELMOD1Q8N336 334 aa12.7□□□□□ -0.38
RABGGTA-218ENST00000560777 ANKRD20A12PQ8NF67 263 aa12.7□□□□□ -0.38
RABGGTA-218ENST00000560777 SLC2A14Q8TDB8 520 aa12.7□□□□□ -0.38
RABGGTA-218ENST00000560777 ADAMTS19Q8TE59 1207 aa12.7□□□□□ -0.38
RABGGTA-218ENST00000560777 JAKMIP2Q96AA8 810 aa12.7□□□□□ -0.38
RABGGTA-218ENST00000560777 CYFIP2Q96F07 1278 aa12.7□□□□□ -0.38
RABGGTA-218ENST00000560777 RPGRIP1Q96KN7 1286 aa12.7□□□□□ -0.38
RABGGTA-218ENST00000560777 HEXIM2Q96MH2 286 aaKnown RBP12.7□□□□□ -0.38
RABGGTA-218ENST00000560777 HNRNPABQ99729 332 aaKnown RBP12.7□□□□□ -0.38
RABGGTA-218ENST00000560777 FAM49BQ9NUQ9 324 aa12.7□□□□□ -0.38
RABGGTA-218ENST00000560777 TMEM30AQ9NV96 361 aa12.7□□□□□ -0.38
RABGGTA-218ENST00000560777 APEX2Q9UBZ4 518 aa12.7□□□□□ -0.38
RABGGTA-218ENST00000560777 ASB3Q9Y575 518 aa12.7□□□□□ -0.38
RABGGTA-218ENST00000560777 C19orf67A6NJJ6 358 aa12.69□□□□□ -0.38
RABGGTA-218ENST00000560777 LOC730098B7Z3J9 87 aa12.69□□□□□ -0.38
RABGGTA-218ENST00000560777 NRG2O14511 850 aaPredicted RBP12.69□□□□□ -0.38
RABGGTA-218ENST00000560777 TPM2P07951 284 aa12.69□□□□□ -0.38
RABGGTA-218ENST00000560777 HMGA1P17096 107 aaKnown RBP12.69□□□□□ -0.38
RABGGTA-218ENST00000560777 SP100P23497 879 aaPredicted RBP12.69□□□□□ -0.38
RABGGTA-218ENST00000560777 FSHRP23945 695 aa12.69□□□□□ -0.38
RABGGTA-218ENST00000560777 CCR2P41597 374 aa12.69□□□□□ -0.38
RABGGTA-218ENST00000560777 EPHA5P54756 1037 aa12.69□□□□□ -0.38
RABGGTA-218ENST00000560777 MFAP3P55082 362 aa12.69□□□□□ -0.38
RABGGTA-218ENST00000560777 ZP2Q05996 745 aa12.69□□□□□ -0.38
RABGGTA-218ENST00000560777 MTMR3Q13615 1198 aa12.69□□□□□ -0.38
RABGGTA-218ENST00000560777 SLC5A9Q2M3M2 681 aa12.69□□□□□ -0.38
RABGGTA-218ENST00000560777 PPP1R26Q5T8A7 1209 aaPredicted RBP12.69□□□□□ -0.38
RABGGTA-218ENST00000560777 TMEM270Q6UE05 265 aa12.69□□□□□ -0.38
RABGGTA-218ENST00000560777 ITIH5Q86UX2 942 aa12.69□□□□□ -0.38
RABGGTA-218ENST00000560777 FAM35AQ86V20 835 aa12.69□□□□□ -0.38
RABGGTA-218ENST00000560777 TMC8Q8IU68 726 aa12.69□□□□□ -0.38
RABGGTA-218ENST00000560777 STKLD1Q8NE28 680 aa12.69□□□□□ -0.38
RABGGTA-218ENST00000560777 ITFG1Q8TB96 612 aa12.69□□□□□ -0.38
RABGGTA-218ENST00000560777 FAM200AQ8TCP9 573 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 77 ms