RNA–Protein interactions for RNA: ENST00000552130.6

VPS29-210, Transcript of VPS29, retromer complex component, humanhuman

TSL 1 (best) BASIC

Gene VPS29, Length 1,057 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-210ENST00000552130 KIAA0355O15063 1070 aa6.83□□□□□ -1.32
VPS29-210ENST00000552130 SOCS5O75159 536 aa6.83□□□□□ -1.32
VPS29-210ENST00000552130 GAP43P17677 238 aa6.83□□□□□ -1.32
VPS29-210ENST00000552130 RXRAP19793 462 aa6.83□□□□□ -1.32
VPS29-210ENST00000552130 SDHBP21912 280 aa6.83□□□□□ -1.32
VPS29-210ENST00000552130 MAPK3P27361 379 aaPredicted RBP6.83□□□□□ -1.32
VPS29-210ENST00000552130 ABCD3P28288 659 aa6.83□□□□□ -1.32
VPS29-210ENST00000552130 PRKAA2P54646 552 aa6.83□□□□□ -1.32
VPS29-210ENST00000552130 JAM2P57087 298 aa6.83□□□□□ -1.32
VPS29-210ENST00000552130 PCBP3P57721 371 aaKnown RBP6.83□□□□□ -1.32
VPS29-210ENST00000552130 ACTR2P61160 394 aa6.83□□□□□ -1.32
VPS29-210ENST00000552130 STK4Q13043 487 aa6.83□□□□□ -1.32
VPS29-210ENST00000552130 IL10RAQ13651 578 aa6.83□□□□□ -1.32
VPS29-210ENST00000552130 ANKRD1Q15327 319 aa6.83□□□□□ -1.32
VPS29-210ENST00000552130 SPATS1Q496A3 300 aa6.83□□□□□ -1.32
VPS29-210ENST00000552130 OLFML2BQ68BL8 750 aa6.83□□□□□ -1.32
VPS29-210ENST00000552130 HHIPL2Q6UWX4 724 aa6.83□□□□□ -1.32
VPS29-210ENST00000552130 BBS12Q6ZW61 710 aa6.83□□□□□ -1.32
VPS29-210ENST00000552130 PPP1R42Q7Z4L9 355 aa6.83□□□□□ -1.32
VPS29-210ENST00000552130 ZNF804AQ7Z570 1209 aa6.83□□□□□ -1.32
VPS29-210ENST00000552130 ZER1Q7Z7L7 766 aa6.83□□□□□ -1.32
VPS29-210ENST00000552130 OSTM1Q86WC4 334 aa6.83□□□□□ -1.32
VPS29-210ENST00000552130 ARMC8Q8IUR7 673 aa6.83□□□□□ -1.32
VPS29-210ENST00000552130 TAGAPQ8N103 731 aa6.83□□□□□ -1.32
VPS29-210ENST00000552130 PIGOQ8TEQ8 1089 aa6.83□□□□□ -1.32
VPS29-210ENST00000552130 TSPEARQ8WU66 669 aa6.83□□□□□ -1.32
VPS29-210ENST00000552130 HDAC10Q969S8 669 aa6.83□□□□□ -1.32
VPS29-210ENST00000552130 NEIL1Q96FI4 390 aaPredicted RBP6.83□□□□□ -1.32
VPS29-210ENST00000552130 SLC35A4Q96G79 324 aa6.83□□□□□ -1.32
VPS29-210ENST00000552130 TMEM237Q96Q45 408 aa6.83□□□□□ -1.32
VPS29-210ENST00000552130 MCMBPQ9BTE3 642 aa6.83□□□□□ -1.32
VPS29-210ENST00000552130 TEX13BQ9BXU2 312 aa6.83□□□□□ -1.32
VPS29-210ENST00000552130 ACE2Q9BYF1 805 aaPredicted RBP6.83□□□□□ -1.32
VPS29-210ENST00000552130 ADAM7Q9H2U9 754 aa6.83□□□□□ -1.32
VPS29-210ENST00000552130 TMEM8AQ9HCN3 771 aa6.83□□□□□ -1.32
VPS29-210ENST00000552130 DPP7Q9UHL4 492 aa6.83□□□□□ -1.32
VPS29-210ENST00000552130 LAMP5Q9UJQ1 280 aa6.83□□□□□ -1.32
VPS29-210ENST00000552130 ANGPTL3Q9Y5C1 460 aa6.83□□□□□ -1.32
VPS29-210ENST00000552130 CCDC78A2IDD5 438 aa6.82□□□□□ -1.32
VPS29-210ENST00000552130 FADS2P1A8MWK0 482 aa6.82□□□□□ -1.32
VPS29-210ENST00000552130 H3BUI4 141 aa6.82□□□□□ -1.32
VPS29-210ENST00000552130 SH2B2O14492 632 aaPredicted RBP6.82□□□□□ -1.32
VPS29-210ENST00000552130 KCNK3O14649 394 aa6.82□□□□□ -1.32
VPS29-210ENST00000552130 SGSM2O43147 1006 aa6.82□□□□□ -1.32
VPS29-210ENST00000552130 THAP12O43422 761 aa6.82□□□□□ -1.32
VPS29-210ENST00000552130 AFPP02771 609 aaKnown RBP6.82□□□□□ -1.32
VPS29-210ENST00000552130 ITGA2BP08514 1039 aa6.82□□□□□ -1.32
VPS29-210ENST00000552130 SNRNP70P08621 437 aaKnown RBP6.82□□□□□ -1.32
VPS29-210ENST00000552130 HSPA1AP0DMV8 641 aaKnown RBP6.82□□□□□ -1.32
VPS29-210ENST00000552130 HSPA1BP0DMV9 641 aaKnown RBP6.82□□□□□ -1.32
VPS29-210ENST00000552130 IFNAR1P17181 557 aa6.82□□□□□ -1.32
VPS29-210ENST00000552130 WASP42768 502 aa6.82□□□□□ -1.32
VPS29-210ENST00000552130 CCT4P50991 539 aaKnown RBP6.82□□□□□ -1.32
VPS29-210ENST00000552130 POLE2P56282 527 aa6.82□□□□□ -1.32
VPS29-210ENST00000552130 NKX6-1P78426 367 aaPredicted RBP6.82□□□□□ -1.32
VPS29-210ENST00000552130 EPS8Q12929 822 aa6.82□□□□□ -1.32
VPS29-210ENST00000552130 KYNUQ16719 465 aa6.82□□□□□ -1.32
VPS29-210ENST00000552130 DUSP28Q4G0W2 176 aa6.82□□□□□ -1.32
VPS29-210ENST00000552130 ATPAF1Q5TC12 328 aaPredicted RBP6.82□□□□□ -1.32
VPS29-210ENST00000552130 WDR73Q6P4I2 378 aa6.82□□□□□ -1.32
VPS29-210ENST00000552130 KLHDC10Q6PID8 442 aa6.82□□□□□ -1.32
VPS29-210ENST00000552130 CEP68Q76N32 757 aa6.82□□□□□ -1.32
VPS29-210ENST00000552130 TMC6Q7Z403 805 aa6.82□□□□□ -1.32
VPS29-210ENST00000552130 PXKQ7Z7A4 578 aa6.82□□□□□ -1.32
VPS29-210ENST00000552130 LURAP1LQ8IV03 231 aa6.82□□□□□ -1.32
VPS29-210ENST00000552130 TTC39CQ8N584 583 aa6.82□□□□□ -1.32
VPS29-210ENST00000552130 FBXO30Q8TB52 745 aa6.82□□□□□ -1.32
VPS29-210ENST00000552130 BRSK1Q8TDC3 778 aa6.82□□□□□ -1.32
VPS29-210ENST00000552130 KCNG4Q8TDN1 519 aa6.82□□□□□ -1.32
VPS29-210ENST00000552130 SH3RF3Q8TEJ3 882 aaPredicted RBP6.82□□□□□ -1.32
VPS29-210ENST00000552130 TBC1D22AQ8WUA7 517 aa6.82□□□□□ -1.32
VPS29-210ENST00000552130 TBC1D5Q92609 795 aa6.82□□□□□ -1.32
VPS29-210ENST00000552130 EXOC4Q96A65 974 aa6.82□□□□□ -1.32
VPS29-210ENST00000552130 SUCLG2Q96I99 432 aa6.82□□□□□ -1.32
VPS29-210ENST00000552130 CABS1Q96KC9 395 aa6.82□□□□□ -1.32
VPS29-210ENST00000552130 C16orf45Q96MC5 204 aaPredicted RBP6.82□□□□□ -1.32
VPS29-210ENST00000552130 POLR3CQ9BUI4 534 aaPredicted RBP6.82□□□□□ -1.32
VPS29-210ENST00000552130 DSCC1Q9BVC3 393 aa6.82□□□□□ -1.32
VPS29-210ENST00000552130 SEMA4AQ9H3S1 761 aa6.82□□□□□ -1.32
VPS29-210ENST00000552130 RMI1Q9H9A7 625 aa6.82□□□□□ -1.32
VPS29-210ENST00000552130 NECTIN3Q9NQS3 549 aa6.82□□□□□ -1.32
VPS29-210ENST00000552130 INCENPQ9NQS7 918 aa6.82□□□□□ -1.32
VPS29-210ENST00000552130 GFOD1Q9NXC2 390 aa6.82□□□□□ -1.32
VPS29-210ENST00000552130 MCM9Q9NXL9 1143 aa6.82□□□□□ -1.32
VPS29-210ENST00000552130 PRR13Q9NZ81 148 aa6.82□□□□□ -1.32
VPS29-210ENST00000552130 COL20A1Q9P218 1284 aa6.82□□□□□ -1.32
VPS29-210ENST00000552130 DKK3Q9UBP4 350 aa6.82□□□□□ -1.32
VPS29-210ENST00000552130 MORF4L1Q9UBU8 362 aa6.82□□□□□ -1.32
VPS29-210ENST00000552130 AFF4Q9UHB7 1163 aaKnown RBP6.82□□□□□ -1.32
VPS29-210ENST00000552130 USP15Q9Y4E8 981 aaPredicted RBP6.82□□□□□ -1.32
VPS29-210ENST00000552130 C2orf71A6NGG8 1288 aa6.81□□□□□ -1.32
VPS29-210ENST00000552130 H3BNC9 293 aa6.81□□□□□ -1.32
VPS29-210ENST00000552130 PSMA7O14818 248 aa6.81□□□□□ -1.32
VPS29-210ENST00000552130 VILLO15195 856 aa6.81□□□□□ -1.32
VPS29-210ENST00000552130 TXNL1O43396 289 aa6.81□□□□□ -1.32
VPS29-210ENST00000552130 ASNA1O43681 348 aa6.81□□□□□ -1.32
VPS29-210ENST00000552130 TK1P04183 234 aa6.81□□□□□ -1.32
VPS29-210ENST00000552130 ANXA2P07355 339 aaKnown RBP6.81□□□□□ -1.32
VPS29-210ENST00000552130 LAMP2P13473 410 aa6.81□□□□□ -1.32
VPS29-210ENST00000552130 NPR1P16066 1061 aa6.81□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 69.1 ms