RNA–Protein interactions for RNA: ENST00000543881.5

GABPB1-206, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 2 BASIC

Gene GABPB1, Length 1,450 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-206ENST00000543881 POLR2BP30876 1174 aaKnown RBP12.77□□□□□ -0.37
GABPB1-206ENST00000543881 HOXD13P35453 343 aa12.77□□□□□ -0.37
GABPB1-206ENST00000543881 TFAMQ00059 246 aaKnown RBP12.77□□□□□ -0.37
GABPB1-206ENST00000543881 ARHGAP15Q53QZ3 475 aa12.77□□□□□ -0.37
GABPB1-206ENST00000543881 TCEAL6Q6IPX3 200 aa12.77□□□□□ -0.37
GABPB1-206ENST00000543881 SHC4Q6S5L8 630 aa12.77□□□□□ -0.37
GABPB1-206ENST00000543881 METTL23Q86XA0 190 aa12.77□□□□□ -0.37
GABPB1-206ENST00000543881 NT5DC4Q86YG4 428 aa12.77□□□□□ -0.37
GABPB1-206ENST00000543881 SYCP3Q8IZU3 236 aa12.77□□□□□ -0.37
GABPB1-206ENST00000543881 TCEAL3Q969E4 200 aa12.77□□□□□ -0.37
GABPB1-206ENST00000543881 SEPT5Q99719 369 aaPredicted RBP12.77□□□□□ -0.37
GABPB1-206ENST00000543881 PDE11AQ9HCR9 933 aa12.77□□□□□ -0.37
GABPB1-206ENST00000543881 TMLHEQ9NVH6 421 aa12.77□□□□□ -0.37
GABPB1-206ENST00000543881 KBTBD4Q9NVX7 518 aa12.77□□□□□ -0.37
GABPB1-206ENST00000543881 THG1LQ9NWX6 298 aaKnown RBP12.77□□□□□ -0.37
GABPB1-206ENST00000543881 RBAKQ9NYW8 714 aaPredicted RBP12.77□□□□□ -0.37
GABPB1-206ENST00000543881 AGAP1Q9UPQ3 857 aa12.77□□□□□ -0.37
GABPB1-206ENST00000543881 TCHHQ07283 1943 aa12.76□□□□□ -0.37
GABPB1-206ENST00000543881 LAMA1P25391 3075 aa12.76□□□□□ -0.37
GABPB1-206ENST00000543881 WEE1P30291 646 aa12.76□□□□□ -0.37
GABPB1-206ENST00000543881 NOVA1P51513 510 aaKnown RBP12.76□□□□□ -0.37
GABPB1-206ENST00000543881 GRSF1Q12849 480 aaKnown RBP eCLIP12.76□□□□□ -0.37
GABPB1-206ENST00000543881 ALCAMQ13740 583 aa12.76□□□□□ -0.37
GABPB1-206ENST00000543881 MGAT5BQ3V5L5 792 aa12.76□□□□□ -0.37
GABPB1-206ENST00000543881 SV2CQ496J9 727 aa12.76□□□□□ -0.37
GABPB1-206ENST00000543881 TMEM196Q5HYL7 178 aa12.76□□□□□ -0.37
GABPB1-206ENST00000543881 CCDC65Q8IXS2 484 aa12.76□□□□□ -0.37
GABPB1-206ENST00000543881 THEM5Q8N1Q8 247 aa12.76□□□□□ -0.37
GABPB1-206ENST00000543881 DHX58Q96C10 678 aa12.76□□□□□ -0.37
GABPB1-206ENST00000543881 TRIM9Q9C026 710 aa12.76□□□□□ -0.37
GABPB1-206ENST00000543881 TNMDQ9H2S6 317 aa12.76□□□□□ -0.37
GABPB1-206ENST00000543881 TASP1Q9H6P5 420 aa12.76□□□□□ -0.37
GABPB1-206ENST00000543881 IL21Q9HBE4 155 aa12.76□□□□□ -0.37
GABPB1-206ENST00000543881 SIX4Q9UIU6 781 aa12.76□□□□□ -0.37
GABPB1-206ENST00000543881 ATRXP46100 2492 aa12.75□□□□□ -0.37
GABPB1-206ENST00000543881 PTPRJQ12913 1337 aa12.75□□□□□ -0.37
GABPB1-206ENST00000543881 GIPC1O14908 333 aa12.75□□□□□ -0.37
GABPB1-206ENST00000543881 CUTAO60888 179 aa12.75□□□□□ -0.37
GABPB1-206ENST00000543881 YEATS4O95619 227 aa12.75□□□□□ -0.37
GABPB1-206ENST00000543881 LDHAP00338 332 aaKnown RBP12.75□□□□□ -0.37
GABPB1-206ENST00000543881 HAPLN1P10915 354 aaPredicted RBP12.75□□□□□ -0.37
GABPB1-206ENST00000543881 TUFMP49411 452 aaKnown RBP12.75□□□□□ -0.37
GABPB1-206ENST00000543881 CYP4F8P98187 520 aa12.75□□□□□ -0.37
GABPB1-206ENST00000543881 FOXD4L6Q3SYB3 417 aaPredicted RBP12.75□□□□□ -0.37
GABPB1-206ENST00000543881 PLK5Q496M5 336 aa12.75□□□□□ -0.37
GABPB1-206ENST00000543881 FSTL4Q6MZW2 842 aa12.75□□□□□ -0.37
GABPB1-206ENST00000543881 FOXD4L3Q6VB84 417 aaPredicted RBP12.75□□□□□ -0.37
GABPB1-206ENST00000543881 ITIH5Q86UX2 942 aa12.75□□□□□ -0.37
GABPB1-206ENST00000543881 PDCL2Q8N4E4 241 aa12.75□□□□□ -0.37
GABPB1-206ENST00000543881 CAMKK1Q8N5S9 505 aa12.75□□□□□ -0.37
GABPB1-206ENST00000543881 GIPC2Q8TF65 315 aa12.75□□□□□ -0.37
GABPB1-206ENST00000543881 NOC3LQ8WTT2 800 aaKnown RBP12.75□□□□□ -0.37
GABPB1-206ENST00000543881 ZNF560Q96MR9 790 aa12.75□□□□□ -0.37
GABPB1-206ENST00000543881 ZNF396Q96N95 335 aaPredicted RBP12.75□□□□□ -0.37
GABPB1-206ENST00000543881 EDEM2Q9BV94 578 aa12.75□□□□□ -0.37
GABPB1-206ENST00000543881 MTMR12Q9C0I1 747 aa12.75□□□□□ -0.37
GABPB1-206ENST00000543881 SMG9Q9H0W8 520 aaKnown RBP12.75□□□□□ -0.37
GABPB1-206ENST00000543881 DUSP15Q9H1R2 295 aaPredicted RBP12.75□□□□□ -0.37
GABPB1-206ENST00000543881 TMEM206Q9H813 350 aa12.75□□□□□ -0.37
GABPB1-206ENST00000543881 GKN1Q9NS71 199 aa12.75□□□□□ -0.37
GABPB1-206ENST00000543881 POLR3BQ9NW08 1133 aaPredicted RBP12.75□□□□□ -0.37
GABPB1-206ENST00000543881 ABI2Q9NYB9 513 aaPredicted RBP12.75□□□□□ -0.37
GABPB1-206ENST00000543881 L1RE1Q9UN81 338 aa12.75□□□□□ -0.37
GABPB1-206ENST00000543881 CEP295Q9C0D2 2601 aa12.75□□□□□ -0.37
GABPB1-206ENST00000543881 TRDMT1O14717 391 aaKnown RBP12.74□□□□□ -0.37
GABPB1-206ENST00000543881 HCRTO43612 131 aa12.74□□□□□ -0.37
GABPB1-206ENST00000543881 HOXB3P14651 431 aaPredicted RBP12.74□□□□□ -0.37
GABPB1-206ENST00000543881 CASP1P29466 404 aa12.74□□□□□ -0.37
GABPB1-206ENST00000543881 PNPLA4P41247 253 aa12.74□□□□□ -0.37
GABPB1-206ENST00000543881 GPR15P49685 360 aa12.74□□□□□ -0.37
GABPB1-206ENST00000543881 FOXC1Q12948 553 aa12.74□□□□□ -0.37
GABPB1-206ENST00000543881 PKP1Q13835 747 aa12.74□□□□□ -0.37
GABPB1-206ENST00000543881 CCDC142Q17RM4 750 aa12.74□□□□□ -0.37
GABPB1-206ENST00000543881 LMBRD2Q68DH5 695 aaPredicted RBP12.74□□□□□ -0.37
GABPB1-206ENST00000543881 EPM2AIP1Q7L775 607 aaPredicted RBP12.74□□□□□ -0.37
GABPB1-206ENST00000543881 OSTM1Q86WC4 334 aa12.74□□□□□ -0.37
GABPB1-206ENST00000543881 CBWD2Q8IUF1 395 aa12.74□□□□□ -0.37
GABPB1-206ENST00000543881 GPD1LQ8N335 351 aa12.74□□□□□ -0.37
GABPB1-206ENST00000543881 CSGALNACT2Q8N6G5 542 aa12.74□□□□□ -0.37
GABPB1-206ENST00000543881 LRRC52Q8N7C0 313 aa12.74□□□□□ -0.37
GABPB1-206ENST00000543881 KDF1Q8NAX2 398 aaPredicted RBP12.74□□□□□ -0.37
GABPB1-206ENST00000543881 STKLD1Q8NE28 680 aa12.74□□□□□ -0.37
GABPB1-206ENST00000543881 OR5B17Q8NGF7 314 aa12.74□□□□□ -0.37
GABPB1-206ENST00000543881 SPPL2BQ8TCT7 592 aa12.74□□□□□ -0.37
GABPB1-206ENST00000543881 C2orf15Q8WU43 125 aaKnown RBP12.74□□□□□ -0.37
GABPB1-206ENST00000543881 CACTINQ8WUQ7 758 aaKnown RBP12.74□□□□□ -0.37
GABPB1-206ENST00000543881 HHIPQ96QV1 700 aa12.74□□□□□ -0.37
GABPB1-206ENST00000543881 OTOL1A6NHN0 477 aaPredicted RBP12.73□□□□□ -0.37
GABPB1-206ENST00000543881 C4orf47A7E2U8 309 aa12.73□□□□□ -0.37
GABPB1-206ENST00000543881 TGFB1I1O43294 461 aa12.73□□□□□ -0.37
GABPB1-206ENST00000543881 RNF40O75150 1001 aa12.73□□□□□ -0.37
GABPB1-206ENST00000543881 RHOBTB1O94844 696 aa12.73□□□□□ -0.37
GABPB1-206ENST00000543881 ZSCAN22P10073 491 aaPredicted RBP12.73□□□□□ -0.37
GABPB1-206ENST00000543881 HMGA1P17096 107 aaKnown RBP12.73□□□□□ -0.37
GABPB1-206ENST00000543881 SPINK2P20155 84 aa12.73□□□□□ -0.37
GABPB1-206ENST00000543881 ACAT1P24752 427 aaKnown RBP12.73□□□□□ -0.37
GABPB1-206ENST00000543881 CDC25CP30307 473 aa12.73□□□□□ -0.37
GABPB1-206ENST00000543881 CREB5Q02930 508 aa12.73□□□□□ -0.37
GABPB1-206ENST00000543881 ZNF252P-AS1Q0IIN9 211 aa12.73□□□□□ -0.37
GABPB1-206ENST00000543881 SMARCB1Q12824 385 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms