RNA–Protein interactions for RNA: ENST00000540763.5

DDX55-207, Transcript of DEAD-box helicase 55, humanhuman

TSL 3

Gene DDX55, Length 799 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-207ENST00000540763 WHAMMQ8TF30 809 aa20.69■□□□□ 0.9
DDX55-207ENST00000540763 MYLPFQ96A32 169 aa20.69■□□□□ 0.9
DDX55-207ENST00000540763 PCED1BQ96HM7 432 aa20.69■□□□□ 0.9
DDX55-207ENST00000540763 DPEP3Q9H4B8 488 aa20.69■□□□□ 0.9
DDX55-207ENST00000540763 APEX2Q9UBZ4 518 aa20.69■□□□□ 0.9
DDX55-207ENST00000540763 HMGXB4Q9UGU5 601 aa20.69■□□□□ 0.9
DDX55-207ENST00000540763 RAPGEFL1Q9UHV5 662 aa20.69■□□□□ 0.9
DDX55-207ENST00000540763 ASB3Q9Y575 518 aa20.69■□□□□ 0.9
DDX55-207ENST00000540763 ATP8B3O60423 1300 aa20.69■□□□□ 0.9
DDX55-207ENST00000540763 DENND4CQ5VZ89 1909 aa20.68■□□□□ 0.9
DDX55-207ENST00000540763 LGALS16A8MUM7 142 aa20.68■□□□□ 0.9
DDX55-207ENST00000540763 CD58P19256 250 aa20.68■□□□□ 0.9
DDX55-207ENST00000540763 ALDH1A3P47895 512 aa20.68■□□□□ 0.9
DDX55-207ENST00000540763 LRMPQ12912 555 aa20.68■□□□□ 0.9
DDX55-207ENST00000540763 MGAT5BQ3V5L5 792 aa20.68■□□□□ 0.9
DDX55-207ENST00000540763 MDH1BQ5I0G3 518 aa20.68■□□□□ 0.9
DDX55-207ENST00000540763 FKBP15Q5T1M5 1219 aa20.68■□□□□ 0.9
DDX55-207ENST00000540763 PHLDB3Q6NSJ2 640 aa20.68■□□□□ 0.9
DDX55-207ENST00000540763 APTXQ7Z2E3 356 aaKnown RBP20.68■□□□□ 0.9
DDX55-207ENST00000540763 ELMOD1Q8N336 334 aa20.68■□□□□ 0.9
DDX55-207ENST00000540763 TTC9BQ8N6N2 239 aa20.68■□□□□ 0.9
DDX55-207ENST00000540763 CRACR2AQ9BSW2 395 aa20.68■□□□□ 0.9
DDX55-207ENST00000540763 ELOVL4Q9GZR5 314 aa20.68■□□□□ 0.9
DDX55-207ENST00000540763 VPS16Q9H269 839 aa20.68■□□□□ 0.9
DDX55-207ENST00000540763 TSPY26PQ9H489 355 aa20.68■□□□□ 0.9
DDX55-207ENST00000540763 PIDD1Q9HB75 910 aa20.68■□□□□ 0.9
DDX55-207ENST00000540763 AVENQ9NQS1 362 aaPredicted RBP20.68■□□□□ 0.9
DDX55-207ENST00000540763 DOCK6Q96HP0 2047 aa20.68■□□□□ 0.9
DDX55-207ENST00000540763 PES1O00541 588 aaKnown RBP20.67■□□□□ 0.9
DDX55-207ENST00000540763 SLC9A1P19634 815 aa20.67■□□□□ 0.9
DDX55-207ENST00000540763 RFX1P22670 979 aa20.67■□□□□ 0.9
DDX55-207ENST00000540763 EPHB3P54753 998 aa20.67■□□□□ 0.9
DDX55-207ENST00000540763 MFAP3P55082 362 aa20.67■□□□□ 0.9
DDX55-207ENST00000540763 RPL10AP62906 217 aaKnown RBP20.67■□□□□ 0.9
DDX55-207ENST00000540763 TWF1Q12792 350 aa20.67■□□□□ 0.9
DDX55-207ENST00000540763 ACOT1Q86TX2 421 aa20.67■□□□□ 0.9
DDX55-207ENST00000540763 ARHGEF19Q8IW93 802 aa20.67■□□□□ 0.9
DDX55-207ENST00000540763 LEMD2Q8NC56 503 aa20.67■□□□□ 0.9
DDX55-207ENST00000540763 TWNKQ96RR1 684 aa20.67■□□□□ 0.9
DDX55-207ENST00000540763 SEPT5Q99719 369 aaPredicted RBP20.67■□□□□ 0.9
DDX55-207ENST00000540763 APOL5Q9BWW9 433 aa20.67■□□□□ 0.9
DDX55-207ENST00000540763 WDR6Q9NNW5 1121 aaKnown RBP20.67■□□□□ 0.9
DDX55-207ENST00000540763 PRKAG3Q9UGI9 489 aa20.67■□□□□ 0.9
DDX55-207ENST00000540763 DAAM1Q9Y4D1 1078 aa20.67■□□□□ 0.9
DDX55-207ENST00000540763 OBSL1O75147 1896 aa20.67■□□□□ 0.9
DDX55-207ENST00000540763 ZNF638Q14966 1978 aaKnown RBP20.66■□□□□ 0.9
DDX55-207ENST00000540763 GOLGA6L19H0YKK7 550 aa20.66■□□□□ 0.9
DDX55-207ENST00000540763 CCL16O15467 120 aa20.66■□□□□ 0.9
DDX55-207ENST00000540763 ATP1A3P13637 1013 aa20.66■□□□□ 0.9
DDX55-207ENST00000540763 CYP27A1Q02318 531 aa20.66■□□□□ 0.9
DDX55-207ENST00000540763 VEPH1Q14D04 833 aa20.66■□□□□ 0.9
DDX55-207ENST00000540763 CCDC142Q17RM4 750 aa20.66■□□□□ 0.9
DDX55-207ENST00000540763 ITIH5Q86UX2 942 aa20.66■□□□□ 0.9
DDX55-207ENST00000540763 LUZP1Q86V48 1076 aa20.66■□□□□ 0.9
DDX55-207ENST00000540763 TMEM176AQ96HP8 235 aa20.66■□□□□ 0.9
DDX55-207ENST00000540763 SIX2Q9NPC8 291 aa20.66■□□□□ 0.9
DDX55-207ENST00000540763 PLCB1Q9NQ66 1216 aa20.66■□□□□ 0.9
DDX55-207ENST00000540763 CNTN6Q9UQ52 1028 aa20.66■□□□□ 0.9
DDX55-207ENST00000540763 SLC27A5Q9Y2P5 690 aa20.66■□□□□ 0.9
DDX55-207ENST00000540763 CLUHO75153 1309 aa20.66■□□□□ 0.9
DDX55-207ENST00000540763 DOCK8Q8NF50 2099 aa20.65■□□□□ 0.9
DDX55-207ENST00000540763 TRIM66O15016 1216 aa20.65■□□□□ 0.9
DDX55-207ENST00000540763 PAEPP09466 180 aa20.65■□□□□ 0.9
DDX55-207ENST00000540763 ATF6P18850 670 aa20.65■□□□□ 0.9
DDX55-207ENST00000540763 ACO1P21399 889 aaKnown RBP20.65■□□□□ 0.9
DDX55-207ENST00000540763 RAD23BP54727 409 aa20.65■□□□□ 0.9
DDX55-207ENST00000540763 EPHA5P54756 1037 aa20.65■□□□□ 0.9
DDX55-207ENST00000540763 KCNMA1Q12791 1236 aa20.65■□□□□ 0.9
DDX55-207ENST00000540763 IQCEQ6IPM2 695 aa20.65■□□□□ 0.9
DDX55-207ENST00000540763 FAM35AQ86V20 835 aa20.65■□□□□ 0.9
DDX55-207ENST00000540763 SLC4A11Q8NBS3 891 aa20.65■□□□□ 0.9
DDX55-207ENST00000540763 PSMG2Q969U7 264 aa20.65■□□□□ 0.9
DDX55-207ENST00000540763 SMARCD1Q96GM5 515 aa20.65■□□□□ 0.9
DDX55-207ENST00000540763 ZNF512Q96ME7 567 aaPredicted RBP20.65■□□□□ 0.9
DDX55-207ENST00000540763 KREMEN1Q96MU8 473 aa20.65■□□□□ 0.9
DDX55-207ENST00000540763 PHF7Q9BWX1 381 aaPredicted RBP20.65■□□□□ 0.9
DDX55-207ENST00000540763 B3GNT5Q9BYG0 378 aa20.65■□□□□ 0.9
DDX55-207ENST00000540763 POMKQ9H5K3 350 aa20.65■□□□□ 0.9
DDX55-207ENST00000540763 UBE2TQ9NPD8 197 aaPredicted RBP20.65■□□□□ 0.9
DDX55-207ENST00000540763 IL9P15248 144 aa20.64■□□□□ 0.89
DDX55-207ENST00000540763 PTPN2P17706 415 aa20.64■□□□□ 0.89
DDX55-207ENST00000540763 CYP2F1P24903 491 aa20.64■□□□□ 0.89
DDX55-207ENST00000540763 DPY19L2P1Q6NXN4 242 aa20.64■□□□□ 0.89
DDX55-207ENST00000540763 RRAGAQ7L523 313 aa20.64■□□□□ 0.89
DDX55-207ENST00000540763 FUKQ8N0W3 1084 aa20.64■□□□□ 0.89
DDX55-207ENST00000540763 SPATA17Q96L03 361 aa20.64■□□□□ 0.89
DDX55-207ENST00000540763 C8orf48Q96LL4 319 aa20.64■□□□□ 0.89
DDX55-207ENST00000540763 ERGIC2Q96RQ1 377 aa20.64■□□□□ 0.89
DDX55-207ENST00000540763 HNRNPABQ99729 332 aaKnown RBP20.64■□□□□ 0.89
DDX55-207ENST00000540763 CEP72Q9P209 647 aa20.64■□□□□ 0.89
DDX55-207ENST00000540763 DNMT3BQ9UBC3 853 aaKnown RBP20.64■□□□□ 0.89
DDX55-207ENST00000540763 KIAA1257Q9ULG3 409 aa20.64■□□□□ 0.89
DDX55-207ENST00000540763 USTQ9Y2C2 406 aa20.64■□□□□ 0.89
DDX55-207ENST00000540763 FGF19O95750 216 aa20.63■□□□□ 0.89
DDX55-207ENST00000540763 CSH1P0DML2 217 aa20.63■□□□□ 0.89
DDX55-207ENST00000540763 CSH2P0DML3 217 aa20.63■□□□□ 0.89
DDX55-207ENST00000540763 BDNFP23560 247 aa20.63■□□□□ 0.89
DDX55-207ENST00000540763 ZNF132P52740 706 aa20.63■□□□□ 0.89
DDX55-207ENST00000540763 FILIP1LQ4L180 1135 aa20.63■□□□□ 0.89
DDX55-207ENST00000540763 PABPC1LQ4VXU2 614 aaKnown RBP20.63■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms