RNA–Protein interactions for RNA: ENST00000538456.3

SMARCA4-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 3

Gene SMARCA4, Length 738 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-206ENST00000538456 ACDQ96AP0 544 aa15.09■□□□□ 0.01
SMARCA4-206ENST00000538456 CYP2S1Q96SQ9 504 aa15.09■□□□□ 0.01
SMARCA4-206ENST00000538456 IKZF4Q9H2S9 585 aa15.09■□□□□ 0.01
SMARCA4-206ENST00000538456 ASB7Q9H672 318 aa15.09■□□□□ 0.01
SMARCA4-206ENST00000538456 ZMIZ1Q9ULJ6 1067 aa15.09■□□□□ 0.01
SMARCA4-206ENST00000538456 TBCAO75347 108 aaKnown RBP15.08■□□□□ 0
SMARCA4-206ENST00000538456 CKMP06732 381 aa15.08■□□□□ 0
SMARCA4-206ENST00000538456 CSH1P0DML2 217 aa15.08■□□□□ 0
SMARCA4-206ENST00000538456 CSH2P0DML3 217 aa15.08■□□□□ 0
SMARCA4-206ENST00000538456 SCP2P22307 547 aa15.08■□□□□ 0
SMARCA4-206ENST00000538456 ACAT1P24752 427 aaKnown RBP15.08■□□□□ 0
SMARCA4-206ENST00000538456 IFNAR2P48551 515 aa15.08■□□□□ 0
SMARCA4-206ENST00000538456 ZNF131P52739 623 aa15.08■□□□□ 0
SMARCA4-206ENST00000538456 MCM6Q14566 821 aa15.08■□□□□ 0
SMARCA4-206ENST00000538456 ZNF268Q14587 947 aaPredicted RBP15.08■□□□□ 0
SMARCA4-206ENST00000538456 SH3PXD2AQ5TCZ1 1133 aa15.08■□□□□ 0
SMARCA4-206ENST00000538456 DAB2IPQ5VWQ8 1189 aa15.08■□□□□ 0
SMARCA4-206ENST00000538456 TSTD1Q8NFU3 115 aa15.08■□□□□ 0
SMARCA4-206ENST00000538456 OSCP1Q8WVF1 389 aa15.08■□□□□ 0
SMARCA4-206ENST00000538456 ATP2A3Q93084 1043 aa15.08■□□□□ 0
SMARCA4-206ENST00000538456 SLC22A12Q96S37 553 aa15.08■□□□□ 0
SMARCA4-206ENST00000538456 CCSER1Q9C0I3 900 aa15.08■□□□□ 0
SMARCA4-206ENST00000538456 EBF1Q9UH73 591 aa15.08■□□□□ 0
SMARCA4-206ENST00000538456 AGO2Q9UKV8 859 aaKnown RBP15.08■□□□□ 0
SMARCA4-206ENST00000538456 AKAP13Q12802 2813 aa15.08■□□□□ 0
SMARCA4-206ENST00000538456 TRAV19A0A0A6YYK7 116 aa15.07■□□□□ 0
SMARCA4-206ENST00000538456 PATE3B3GLJ2 98 aa15.07■□□□□ 0
SMARCA4-206ENST00000538456 TOP3BO95985 862 aaKnown RBP15.07■□□□□ 0
SMARCA4-206ENST00000538456 CYP2F1P24903 491 aa15.07■□□□□ 0
SMARCA4-206ENST00000538456 SEC13P55735 322 aa15.07■□□□□ 0
SMARCA4-206ENST00000538456 FAM160A1Q05DH4 1040 aa15.07■□□□□ 0
SMARCA4-206ENST00000538456 ZNF77Q15935 545 aa15.07■□□□□ 0
SMARCA4-206ENST00000538456 CCDC142Q17RM4 750 aa15.07■□□□□ 0
SMARCA4-206ENST00000538456 ANO7Q6IWH7 933 aa15.07■□□□□ 0
SMARCA4-206ENST00000538456 TTC30AQ86WT1 665 aa15.07■□□□□ 0
SMARCA4-206ENST00000538456 PDCL2Q8N4E4 241 aa15.07■□□□□ 0
SMARCA4-206ENST00000538456 RASSF8Q8NHQ8 419 aa15.07■□□□□ 0
SMARCA4-206ENST00000538456 CALML4Q96GE6 196 aa15.07■□□□□ 0
SMARCA4-206ENST00000538456 ZNF560Q96MR9 790 aa15.07■□□□□ 0
SMARCA4-206ENST00000538456 FIZ1Q96SL8 496 aa15.07■□□□□ 0
SMARCA4-206ENST00000538456 BLOC1S4Q9NUP1 217 aa15.07■□□□□ 0
SMARCA4-206ENST00000538456 UXTQ9UBK9 157 aaPredicted RBP15.07■□□□□ 0
SMARCA4-206ENST00000538456 ASCC3Q8N3C0 2202 aaKnown RBP15.07■□□□□ 0
SMARCA4-206ENST00000538456 PTPRDP23468 1912 aa15.06■□□□□ 0
SMARCA4-206ENST00000538456 SOBPA7XYQ1 873 aa15.06■□□□□ 0
SMARCA4-206ENST00000538456 KHNYNO15037 678 aaKnown RBP15.06■□□□□ 0
SMARCA4-206ENST00000538456 USP17L7P0C7H9 530 aa15.06■□□□□ 0
SMARCA4-206ENST00000538456 PLCG1P19174 1290 aa15.06■□□□□ 0
SMARCA4-206ENST00000538456 BCKDHBP21953 392 aa15.06■□□□□ 0
SMARCA4-206ENST00000538456 POLR2BP30876 1174 aaKnown RBP15.06■□□□□ 0
SMARCA4-206ENST00000538456 UBA7P41226 1012 aa15.06■□□□□ 0
SMARCA4-206ENST00000538456 RPL10AP62906 217 aaKnown RBP15.06■□□□□ 0
SMARCA4-206ENST00000538456 TFAMQ00059 246 aaKnown RBP15.06■□□□□ 0
SMARCA4-206ENST00000538456 GTF2BQ00403 316 aa15.06■□□□□ 0
SMARCA4-206ENST00000538456 USP4Q13107 963 aa15.06■□□□□ 0
SMARCA4-206ENST00000538456 NFE2Q16621 373 aaPredicted RBP15.06■□□□□ 0
SMARCA4-206ENST00000538456 EML3Q32P44 896 aa15.06■□□□□ 0
SMARCA4-206ENST00000538456 C2orf27AQ580R0 203 aa15.06■□□□□ 0
SMARCA4-206ENST00000538456 ARL6IP4Q66PJ3 421 aaKnown RBP15.06■□□□□ 0
SMARCA4-206ENST00000538456 PMS2CLQ68D20 193 aa15.06■□□□□ 0
SMARCA4-206ENST00000538456 SLFN12LQ6IEE8 588 aa15.06■□□□□ 0
SMARCA4-206ENST00000538456 CYP2U1Q7Z449 544 aa15.06■□□□□ 0
SMARCA4-206ENST00000538456 ARL14EPQ8N8R7 260 aaPredicted RBP15.06■□□□□ 0
SMARCA4-206ENST00000538456 POMGNT1Q8WZA1 660 aa15.06■□□□□ 0
SMARCA4-206ENST00000538456 TMEM206Q9H813 350 aa15.06■□□□□ 0
SMARCA4-206ENST00000538456 TMEM9BQ9NQ34 198 aa15.06■□□□□ 0
SMARCA4-206ENST00000538456 L1RE1Q9UN81 338 aa15.06■□□□□ 0
SMARCA4-206ENST00000538456 C2orf78A6NCI8 922 aa15.05■□□□□ -0
SMARCA4-206ENST00000538456 ANTXRLA6NF34 631 aa15.05■□□□□ -0
SMARCA4-206ENST00000538456 HCRTO43612 131 aa15.05■□□□□ -0
SMARCA4-206ENST00000538456 EIF5BO60841 1220 aaKnown RBP15.05■□□□□ -0
SMARCA4-206ENST00000538456 NOL4O94818 638 aa15.05■□□□□ -0
SMARCA4-206ENST00000538456 ITGB3P05106 788 aa15.05■□□□□ -0
SMARCA4-206ENST00000538456 DHPSP49366 369 aaPredicted RBP15.05■□□□□ -0
SMARCA4-206ENST00000538456 COL9A2Q14055 689 aaPredicted RBP15.05■□□□□ -0
SMARCA4-206ENST00000538456 KCNB1Q14721 858 aa15.05■□□□□ -0
SMARCA4-206ENST00000538456 UAP1L1Q3KQV9 507 aa15.05■□□□□ -0
SMARCA4-206ENST00000538456 USP39Q53GS9 565 aaKnown RBP15.05■□□□□ -0
SMARCA4-206ENST00000538456 INTS6LQ5JSJ4 861 aaKnown RBP15.05■□□□□ -0
SMARCA4-206ENST00000538456 ERICH6BQ5W0A0 696 aa15.05■□□□□ -0
SMARCA4-206ENST00000538456 CRELD2Q6UXH1 353 aaPredicted RBP15.05■□□□□ -0
SMARCA4-206ENST00000538456 SCN4BQ8IWT1 228 aa15.05■□□□□ -0
SMARCA4-206ENST00000538456 SH3RF2Q8TEC5 729 aa15.05■□□□□ -0
SMARCA4-206ENST00000538456 LEO1Q8WVC0 666 aaPredicted RBP15.05■□□□□ -0
SMARCA4-206ENST00000538456 RAD54LQ92698 747 aa15.05■□□□□ -0
SMARCA4-206ENST00000538456 TRMT2BQ96GJ1 504 aaKnown RBP15.05■□□□□ -0
SMARCA4-206ENST00000538456 FAM84AQ96KN4 292 aa15.05■□□□□ -0
SMARCA4-206ENST00000538456 AK8Q96MA6 479 aa15.05■□□□□ -0
SMARCA4-206ENST00000538456 ADAM33Q9BZ11 813 aa15.05■□□□□ -0
SMARCA4-206ENST00000538456 LINC00597Q9H2U6 94 aa15.05■□□□□ -0
SMARCA4-206ENST00000538456 DDX43Q9NXZ2 648 aaKnown RBP15.05■□□□□ -0
SMARCA4-206ENST00000538456 GTF3C4Q9UKN8 822 aa15.05■□□□□ -0
SMARCA4-206ENST00000538456 CIZ1Q9ULV3 898 aaPredicted RBP15.05■□□□□ -0
SMARCA4-206ENST00000538456 AGAP1Q9UPQ3 857 aa15.05■□□□□ -0
SMARCA4-206ENST00000538456 PKD1L2Q7Z442 2459 aa15.05■□□□□ -0
SMARCA4-206ENST00000538456 GON4LQ3T8J9 2241 aa15.04■□□□□ -0
SMARCA4-206ENST00000538456 HUS1O60921 280 aa15.04■□□□□ -0
SMARCA4-206ENST00000538456 IL18RAPO95256 599 aa15.04■□□□□ -0
SMARCA4-206ENST00000538456 ABCD1P33897 745 aa15.04■□□□□ -0
SMARCA4-206ENST00000538456 PNPLA4P41247 253 aa15.04■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms