RNA–Protein interactions for RNA: ENST00000537164.1

SFSWAP-205, Transcript of splicing factor SWAP, humanhuman

TSL 5

Gene SFSWAP, Length 961 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-205ENST00000537164 NOL4O94818 638 aa18.37■□□□□ 0.53
SFSWAP-205ENST00000537164 ASS1P00966 412 aaKnown RBP18.37■□□□□ 0.53
SFSWAP-205ENST00000537164 F11P03951 625 aa18.37■□□□□ 0.53
SFSWAP-205ENST00000537164 PDGFRBP09619 1106 aa18.37■□□□□ 0.53
SFSWAP-205ENST00000537164 PSMC3P17980 439 aa18.37■□□□□ 0.53
SFSWAP-205ENST00000537164 PSMC1P62191 440 aaKnown RBP18.37■□□□□ 0.53
SFSWAP-205ENST00000537164 PRKCQQ04759 706 aa18.37■□□□□ 0.53
SFSWAP-205ENST00000537164 ZNF667Q5HYK9 610 aa18.37■□□□□ 0.53
SFSWAP-205ENST00000537164 STXBP5Q5T5C0 1151 aa18.37■□□□□ 0.53
SFSWAP-205ENST00000537164 VITQ6UXI7 678 aa18.37■□□□□ 0.53
SFSWAP-205ENST00000537164 MFSD6LQ8IWD5 586 aa18.37■□□□□ 0.53
SFSWAP-205ENST00000537164 ADSSL1Q8N142 457 aa18.37■□□□□ 0.53
SFSWAP-205ENST00000537164 PRSS33Q8NF86 280 aa18.37■□□□□ 0.53
SFSWAP-205ENST00000537164 DNASE1L2Q92874 299 aa18.37■□□□□ 0.53
SFSWAP-205ENST00000537164 SPATA17Q96L03 361 aa18.37■□□□□ 0.53
SFSWAP-205ENST00000537164 SNX25Q9H3E2 840 aa18.37■□□□□ 0.53
SFSWAP-205ENST00000537164 OBP2AQ9NY56 170 aa18.37■□□□□ 0.53
SFSWAP-205ENST00000537164 MAGEC2Q9UBF1 373 aaPredicted RBP18.37■□□□□ 0.53
SFSWAP-205ENST00000537164 NXF1Q9UBU9 619 aaKnown RBP18.37■□□□□ 0.53
SFSWAP-205ENST00000537164 CA14Q9ULX7 337 aa18.37■□□□□ 0.53
SFSWAP-205ENST00000537164 ZNF638Q14966 1978 aaKnown RBP18.37■□□□□ 0.53
SFSWAP-205ENST00000537164 PIEZO1Q92508 2521 aa18.37■□□□□ 0.53
SFSWAP-205ENST00000537164 NCANO14594 1321 aa18.36■□□□□ 0.53
SFSWAP-205ENST00000537164 KRT13P13646 458 aa18.36■□□□□ 0.53
SFSWAP-205ENST00000537164 GTF2H1P32780 548 aa18.36■□□□□ 0.53
SFSWAP-205ENST00000537164 GPR15P49685 360 aa18.36■□□□□ 0.53
SFSWAP-205ENST00000537164 NLRP12P59046 1061 aa18.36■□□□□ 0.53
SFSWAP-205ENST00000537164 PPP3CAQ08209 521 aa18.36■□□□□ 0.53
SFSWAP-205ENST00000537164 FCHO2Q0JRZ9 810 aa18.36■□□□□ 0.53
SFSWAP-205ENST00000537164 TAF12Q16514 161 aa18.36■□□□□ 0.53
SFSWAP-205ENST00000537164 DDR2Q16832 855 aa18.36■□□□□ 0.53
SFSWAP-205ENST00000537164 SLC44A4Q53GD3 710 aa18.36■□□□□ 0.53
SFSWAP-205ENST00000537164 ARHGAP15Q53QZ3 475 aa18.36■□□□□ 0.53
SFSWAP-205ENST00000537164 FLCNQ8NFG4 579 aa18.36■□□□□ 0.53
SFSWAP-205ENST00000537164 OR6B3Q8NGW1 331 aa18.36■□□□□ 0.53
SFSWAP-205ENST00000537164 ERCC4Q92889 916 aaPredicted RBP18.36■□□□□ 0.53
SFSWAP-205ENST00000537164 MYLPFQ96A32 169 aa18.36■□□□□ 0.53
SFSWAP-205ENST00000537164 PCED1BQ96HM7 432 aa18.36■□□□□ 0.53
SFSWAP-205ENST00000537164 SHDQ96IW2 340 aa18.36■□□□□ 0.53
SFSWAP-205ENST00000537164 TRMT61BQ9BVS5 477 aaKnown RBP18.36■□□□□ 0.53
SFSWAP-205ENST00000537164 SLITRK6Q9H5Y7 841 aa18.36■□□□□ 0.53
SFSWAP-205ENST00000537164 TASP1Q9H6P5 420 aa18.36■□□□□ 0.53
SFSWAP-205ENST00000537164 TBC1D17Q9HA65 648 aa18.36■□□□□ 0.53
SFSWAP-205ENST00000537164 UXTQ9UBK9 157 aaPredicted RBP18.36■□□□□ 0.53
SFSWAP-205ENST00000537164 MIA3Q5JRA6 1907 aa18.35■□□□□ 0.53
SFSWAP-205ENST00000537164 TICRRQ7Z2Z1 1910 aa18.35■□□□□ 0.53
SFSWAP-205ENST00000537164 MYO15AQ9UKN7 3530 aa18.35■□□□□ 0.53
SFSWAP-205ENST00000537164 CETN3O15182 167 aa18.35■□□□□ 0.53
SFSWAP-205ENST00000537164 GALR2O43603 387 aaPredicted RBP18.35■□□□□ 0.53
SFSWAP-205ENST00000537164 PI15O43692 258 aa18.35■□□□□ 0.53
SFSWAP-205ENST00000537164 P4HA1P13674 534 aa18.35■□□□□ 0.53
SFSWAP-205ENST00000537164 PTPN1P18031 435 aaKnown RBP18.35■□□□□ 0.53
SFSWAP-205ENST00000537164 DDX6P26196 483 aaKnown RBP eCLIP18.35■□□□□ 0.53
SFSWAP-205ENST00000537164 VIPR2P41587 438 aa18.35■□□□□ 0.53
SFSWAP-205ENST00000537164 LRRC63Q05C16 580 aa18.35■□□□□ 0.53
SFSWAP-205ENST00000537164 TCF15Q12870 199 aa18.35■□□□□ 0.53
SFSWAP-205ENST00000537164 MLF2Q15773 248 aaPredicted RBP18.35■□□□□ 0.53
SFSWAP-205ENST00000537164 GPR158Q5T848 1215 aa18.35■□□□□ 0.53
SFSWAP-205ENST00000537164 ARID3BQ8IVW6 561 aaPredicted RBP18.35■□□□□ 0.53
SFSWAP-205ENST00000537164 RSPRY1Q96DX4 576 aa18.35■□□□□ 0.53
SFSWAP-205ENST00000537164 FAM122AQ96E09 287 aa18.35■□□□□ 0.53
SFSWAP-205ENST00000537164 GCNAQ96QF7 691 aa18.35■□□□□ 0.53
SFSWAP-205ENST00000537164 SMYD3Q9H7B4 428 aa18.35■□□□□ 0.53
SFSWAP-205ENST00000537164 SLC38A8A6NNN8 435 aa18.34■□□□□ 0.53
SFSWAP-205ENST00000537164 HEPACAM2A8MVW5 462 aa18.34■□□□□ 0.53
SFSWAP-205ENST00000537164 A8MXQ7 604 aa18.34■□□□□ 0.53
SFSWAP-205ENST00000537164 ARNTLO00327 626 aa18.34■□□□□ 0.53
SFSWAP-205ENST00000537164 SLC16A3O15427 465 aaKnown RBP18.34■□□□□ 0.53
SFSWAP-205ENST00000537164 HLA-DRAP01903 254 aa18.34■□□□□ 0.53
SFSWAP-205ENST00000537164 TRIM49P0CI25 452 aa18.34■□□□□ 0.53
SFSWAP-205ENST00000537164 TRIM49CP0CI26 452 aa18.34■□□□□ 0.53
SFSWAP-205ENST00000537164 BDNFP23560 247 aa18.34■□□□□ 0.53
SFSWAP-205ENST00000537164 PPP1R2P41236 205 aa18.34■□□□□ 0.53
SFSWAP-205ENST00000537164 PTPN5P54829 565 aa18.34■□□□□ 0.53
SFSWAP-205ENST00000537164 CDH8P55286 799 aa18.34■□□□□ 0.53
SFSWAP-205ENST00000537164 FKBP3Q00688 224 aaKnown RBP18.34■□□□□ 0.53
SFSWAP-205ENST00000537164 NHLH1Q02575 133 aa18.34■□□□□ 0.53
SFSWAP-205ENST00000537164 SDHAF4Q5VUM1 108 aa18.34■□□□□ 0.53
SFSWAP-205ENST00000537164 ANKRD40Q6AI12 368 aa18.34■□□□□ 0.53
SFSWAP-205ENST00000537164 FOXR2Q6PJQ5 311 aa18.34■□□□□ 0.53
SFSWAP-205ENST00000537164 B3GALNT2Q8NCR0 500 aa18.34■□□□□ 0.53
SFSWAP-205ENST00000537164 IRF7Q92985 503 aa18.34■□□□□ 0.53
SFSWAP-205ENST00000537164 FAXDC2Q96IV6 333 aa18.34■□□□□ 0.53
SFSWAP-205ENST00000537164 SLC46A2Q9BY10 475 aa18.34■□□□□ 0.53
SFSWAP-205ENST00000537164 BCO2Q9BYV7 579 aa18.34■□□□□ 0.53
SFSWAP-205ENST00000537164 SDCBP2Q9H190 292 aa18.34■□□□□ 0.53
SFSWAP-205ENST00000537164 DPEP3Q9H4B8 488 aa18.34■□□□□ 0.53
SFSWAP-205ENST00000537164 TMEM8AQ9HCN3 771 aa18.34■□□□□ 0.53
SFSWAP-205ENST00000537164 MAN1B1Q9UKM7 699 aa18.34■□□□□ 0.53
SFSWAP-205ENST00000537164 USP34Q70CQ2 3546 aa18.34■□□□□ 0.53
SFSWAP-205ENST00000537164 WDR87Q6ZQQ6 2873 aa18.34■□□□□ 0.53
SFSWAP-205ENST00000537164 COL4A3Q01955 1670 aa18.34■□□□□ 0.53
SFSWAP-205ENST00000537164 F5P12259 2224 aa18.33■□□□□ 0.53
SFSWAP-205ENST00000537164 TRIM66O15016 1216 aa18.33■□□□□ 0.52
SFSWAP-205ENST00000537164 TADA3O75528 432 aa18.33■□□□□ 0.52
SFSWAP-205ENST00000537164 BMP6P22004 513 aa18.33■□□□□ 0.52
SFSWAP-205ENST00000537164 CCNE1P24864 410 aa18.33■□□□□ 0.52
SFSWAP-205ENST00000537164 PIK3CAP42336 1068 aa18.33■□□□□ 0.52
SFSWAP-205ENST00000537164 ASPAP45381 313 aa18.33■□□□□ 0.52
SFSWAP-205ENST00000537164 GCLMP48507 274 aa18.33■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms