RNA–Protein interactions for RNA: ENST00000533801.6

ATP2C1-224, Transcript of ATPase secretory pathway Ca2+ transporting 1, humanhuman

TSL 1 (best) BASIC

Gene ATP2C1, Length 3,690 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2C1-224ENST00000533801 PTP4A2Q12974 167 aa16.76■□□□□ 0.27
ATP2C1-224ENST00000533801 LAMC2Q13753 1193 aa16.76■□□□□ 0.27
ATP2C1-224ENST00000533801 KRT81Q14533 505 aa16.76■□□□□ 0.27
ATP2C1-224ENST00000533801 CYP4X1Q8N118 509 aa16.76■□□□□ 0.27
ATP2C1-224ENST00000533801 FZD8Q9H461 694 aa16.76■□□□□ 0.27
ATP2C1-224ENST00000533801 ATP8B3O60423 1300 aa16.76■□□□□ 0.27
ATP2C1-224ENST00000533801 FAM189A1O60320 539 aa16.76■□□□□ 0.27
ATP2C1-224ENST00000533801 GDF10P55107 478 aa16.76■□□□□ 0.27
ATP2C1-224ENST00000533801 CORO7P57737 925 aa16.76■□□□□ 0.27
ATP2C1-224ENST00000533801 SURF1Q15526 300 aa16.76■□□□□ 0.27
ATP2C1-224ENST00000533801 TTC31Q49AM3 519 aaPredicted RBP16.76■□□□□ 0.27
ATP2C1-224ENST00000533801 NUGGCQ68CJ6 796 aa16.76■□□□□ 0.27
ATP2C1-224ENST00000533801 MICALCLQ6ZW33 695 aa16.76■□□□□ 0.27
ATP2C1-224ENST00000533801 RCOR2Q8IZ40 523 aa16.76■□□□□ 0.27
ATP2C1-224ENST00000533801 CFAP57Q96MR6 1250 aa16.76■□□□□ 0.27
ATP2C1-224ENST00000533801 EIF2AQ9BY44 585 aaKnown RBP16.76■□□□□ 0.27
ATP2C1-224ENST00000533801 TSPAN16Q9UKR8 245 aa16.76■□□□□ 0.27
ATP2C1-224ENST00000533801 PIN4Q9Y237 131 aaKnown RBP16.76■□□□□ 0.27
ATP2C1-224ENST00000533801 WDR81Q562E7 1941 aa16.76■□□□□ 0.27
ATP2C1-224ENST00000533801 LCP1P13796 627 aa16.75■□□□□ 0.27
ATP2C1-224ENST00000533801 MAGEA4P43358 317 aa16.75■□□□□ 0.27
ATP2C1-224ENST00000533801 BSPRYQ5W0U4 402 aa16.75■□□□□ 0.27
ATP2C1-224ENST00000533801 KATNAL2Q8IYT4 538 aa16.75■□□□□ 0.27
ATP2C1-224ENST00000533801 FAM149B1Q96BN6 582 aa16.75■□□□□ 0.27
ATP2C1-224ENST00000533801 TMEM176AQ96HP8 235 aa16.75■□□□□ 0.27
ATP2C1-224ENST00000533801 ALG13Q9NP73 1137 aaKnown RBP16.75■□□□□ 0.27
ATP2C1-224ENST00000533801 RASA4BC9J798 803 aa16.75■□□□□ 0.27
ATP2C1-224ENST00000533801 RASA4O43374 803 aa16.75■□□□□ 0.27
ATP2C1-224ENST00000533801 MED7O43513 233 aa16.75■□□□□ 0.27
ATP2C1-224ENST00000533801 CELF2O95319 508 aaKnown RBP16.75■□□□□ 0.27
ATP2C1-224ENST00000533801 NEFHP12036 1026 aa16.75■□□□□ 0.27
ATP2C1-224ENST00000533801 STX2P32856 288 aa16.75■□□□□ 0.27
ATP2C1-224ENST00000533801 CCDC142Q17RM4 750 aa16.75■□□□□ 0.27
ATP2C1-224ENST00000533801 GOLGA7BQ2TAP0 167 aa16.75■□□□□ 0.27
ATP2C1-224ENST00000533801 TAOK1Q7L7X3 1001 aa16.75■□□□□ 0.27
ATP2C1-224ENST00000533801 SEC16BQ96JE7 1060 aa16.75■□□□□ 0.27
ATP2C1-224ENST00000533801 FGFR1OP2Q9NVK5 253 aa16.75■□□□□ 0.27
ATP2C1-224ENST00000533801 TUBGCP4Q9UGJ1 667 aa16.75■□□□□ 0.27
ATP2C1-224ENST00000533801 TCP11X1B4DZS4 312 aa16.75■□□□□ 0.27
ATP2C1-224ENST00000533801 LRCH4O75427 683 aa16.75■□□□□ 0.27
ATP2C1-224ENST00000533801 TTC4O95801 387 aa16.75■□□□□ 0.27
ATP2C1-224ENST00000533801 MYL3P08590 195 aa16.75■□□□□ 0.27
ATP2C1-224ENST00000533801 SMPD1P17405 629 aa16.75■□□□□ 0.27
ATP2C1-224ENST00000533801 MIPP30301 263 aa16.75■□□□□ 0.27
ATP2C1-224ENST00000533801 CCNG2Q16589 344 aa16.75■□□□□ 0.27
ATP2C1-224ENST00000533801 TFDP3Q5H9I0 405 aa16.75■□□□□ 0.27
ATP2C1-224ENST00000533801 DARS2Q6PI48 645 aaKnown RBP16.75■□□□□ 0.27
ATP2C1-224ENST00000533801 TADA2BQ86TJ2 420 aa16.75■□□□□ 0.27
ATP2C1-224ENST00000533801 EXOC3L1Q86VI1 746 aa16.75■□□□□ 0.27
ATP2C1-224ENST00000533801 SLC4A11Q8NBS3 891 aa16.75■□□□□ 0.27
ATP2C1-224ENST00000533801 DNAJB3Q8WWF6 145 aa16.75■□□□□ 0.27
ATP2C1-224ENST00000533801 CHMP6Q96FZ7 201 aa16.75■□□□□ 0.27
ATP2C1-224ENST00000533801 CCDC77Q9BR77 488 aa16.75■□□□□ 0.27
ATP2C1-224ENST00000533801 SAMD15Q9P1V8 674 aa16.75■□□□□ 0.27
ATP2C1-224ENST00000533801 NR2E3Q9Y5X4 410 aa16.75■□□□□ 0.27
ATP2C1-224ENST00000533801 AP3M2P53677 418 aa16.74■□□□□ 0.27
ATP2C1-224ENST00000533801 CYP1B1Q16678 543 aa16.74■□□□□ 0.27
ATP2C1-224ENST00000533801 FAM47CQ5HY64 1035 aa16.74■□□□□ 0.27
ATP2C1-224ENST00000533801 CDCA2Q69YH5 1023 aaPredicted RBP16.74■□□□□ 0.27
ATP2C1-224ENST00000533801 EIF1ADQ8N9N8 165 aaKnown RBP16.74■□□□□ 0.27
ATP2C1-224ENST00000533801 NDRG1Q92597 394 aaKnown RBP16.74■□□□□ 0.27
ATP2C1-224ENST00000533801 MAGED2Q9UNF1 606 aaPredicted RBP16.74■□□□□ 0.27
ATP2C1-224ENST00000533801 TNFSF13BQ9Y275 285 aa16.74■□□□□ 0.27
ATP2C1-224ENST00000533801 TRAPPC3O43617 180 aa16.74■□□□□ 0.27
ATP2C1-224ENST00000533801 LIASO43766 372 aa16.74■□□□□ 0.27
ATP2C1-224ENST00000533801 CETPP11597 493 aa16.74■□□□□ 0.27
ATP2C1-224ENST00000533801 PTK6Q13882 451 aa16.74■□□□□ 0.27
ATP2C1-224ENST00000533801 MTHFD1LQ6UB35 978 aa16.74■□□□□ 0.27
ATP2C1-224ENST00000533801 PAXIP1Q6ZW49 1069 aaPredicted RBP16.74■□□□□ 0.27
ATP2C1-224ENST00000533801 TMEM174Q8WUU8 243 aa16.74■□□□□ 0.27
ATP2C1-224ENST00000533801 NXF3Q9H4D5 531 aaKnown RBP16.74■□□□□ 0.27
ATP2C1-224ENST00000533801 WHRNQ9P202 907 aa16.74■□□□□ 0.27
ATP2C1-224ENST00000533801 CTSHP09668 335 aa16.74■□□□□ 0.27
ATP2C1-224ENST00000533801 P4HA1P13674 534 aa16.74■□□□□ 0.27
ATP2C1-224ENST00000533801 DRG2P55039 364 aaKnown RBP16.74■□□□□ 0.27
ATP2C1-224ENST00000533801 BRI3BPQ8WY22 251 aa16.74■□□□□ 0.27
ATP2C1-224ENST00000533801 UPF1Q92900 1129 aaKnown RBP eCLIP16.74■□□□□ 0.27
ATP2C1-224ENST00000533801 A8MXQ7 604 aa16.73■□□□□ 0.27
ATP2C1-224ENST00000533801 ABLIM1O14639 778 aa16.73■□□□□ 0.27
ATP2C1-224ENST00000533801 SSTR1P30872 391 aa16.73■□□□□ 0.27
ATP2C1-224ENST00000533801 GBP1P32455 592 aa16.73■□□□□ 0.27
ATP2C1-224ENST00000533801 PIGHQ14442 188 aaPredicted RBP16.73■□□□□ 0.27
ATP2C1-224ENST00000533801 ILDR2Q71H61 639 aa16.73■□□□□ 0.27
ATP2C1-224ENST00000533801 GPR142Q7Z601 462 aa16.73■□□□□ 0.27
ATP2C1-224ENST00000533801 C3orf20Q8ND61 904 aa16.73■□□□□ 0.27
ATP2C1-224ENST00000533801 SPATA18Q8TC71 538 aa16.73■□□□□ 0.27
ATP2C1-224ENST00000533801 RXFP2Q8WXD0 754 aa16.73■□□□□ 0.27
ATP2C1-224ENST00000533801 MRPL45Q9BRJ2 306 aaKnown RBP16.73■□□□□ 0.27
ATP2C1-224ENST00000533801 MAGEB5Q9BZ81 275 aa16.73■□□□□ 0.27
ATP2C1-224ENST00000533801 TXLNGYQ9BZA5 131 aa16.73■□□□□ 0.27
ATP2C1-224ENST00000533801 LGR5O75473 907 aa16.73■□□□□ 0.27
ATP2C1-224ENST00000533801 MAN1A1P33908 653 aa16.73■□□□□ 0.27
ATP2C1-224ENST00000533801 ATXN1P54253 815 aaKnown RBP16.73■□□□□ 0.27
ATP2C1-224ENST00000533801 EIF3EP60228 445 aaKnown RBP16.73■□□□□ 0.27
ATP2C1-224ENST00000533801 TAPT1Q6NXT6 567 aa16.73■□□□□ 0.27
ATP2C1-224ENST00000533801 FBXO41Q8TF61 875 aa16.73■□□□□ 0.27
ATP2C1-224ENST00000533801 C12orf65Q9H3J6 166 aaKnown RBP16.73■□□□□ 0.27
ATP2C1-224ENST00000533801 PIH1D1Q9NWS0 290 aaKnown RBP16.73■□□□□ 0.27
ATP2C1-224ENST00000533801 NKIRAS1Q9NYS0 192 aa16.73■□□□□ 0.27
ATP2C1-224ENST00000533801 MEFVO15553 781 aaPredicted RBP16.73■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms