RNA–Protein interactions for RNA: ENST00000530546.5

USP35-207, Transcript of ubiquitin specific peptidase 35, humanhuman

TSL 1 (best)

Gene USP35, Length 2,986 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP35-207ENST00000530546 GADD45GIP1Q8TAE8 222 aaPredicted RBP12.18□□□□□ -0.46
USP35-207ENST00000530546 FEZF2Q8TBJ5 459 aa12.18□□□□□ -0.46
USP35-207ENST00000530546 NLRP7Q8WX94 980 aa12.18□□□□□ -0.46
USP35-207ENST00000530546 EZH1Q92800 747 aaPredicted RBP12.18□□□□□ -0.46
USP35-207ENST00000530546 ACSF2Q96CM8 615 aaPredicted RBP12.18□□□□□ -0.46
USP35-207ENST00000530546 ECT2Q9H8V3 914 aa12.18□□□□□ -0.46
USP35-207ENST00000530546 IFT122Q9HBG6 1241 aa12.18□□□□□ -0.46
USP35-207ENST00000530546 R3HDM2Q9Y2K5 976 aaKnown RBP12.18□□□□□ -0.46
USP35-207ENST00000530546 LRRC42Q9Y546 428 aa12.18□□□□□ -0.46
USP35-207ENST00000530546 ASB3Q9Y575 518 aa12.18□□□□□ -0.46
USP35-207ENST00000530546 PCNTO95613 3336 aa12.18□□□□□ -0.46
USP35-207ENST00000530546 GOLGA8SH3BPF8 625 aa12.18□□□□□ -0.46
USP35-207ENST00000530546 PODXLO00592 558 aa12.18□□□□□ -0.46
USP35-207ENST00000530546 FSCN2O14926 492 aa12.18□□□□□ -0.46
USP35-207ENST00000530546 ECEL1O95672 775 aa12.18□□□□□ -0.46
USP35-207ENST00000530546 STAG3L1P0CL83 205 aa12.18□□□□□ -0.46
USP35-207ENST00000530546 TCF4P15884 667 aa12.18□□□□□ -0.46
USP35-207ENST00000530546 MSH2P43246 934 aa12.18□□□□□ -0.46
USP35-207ENST00000530546 KAZNQ674X7 775 aa12.18□□□□□ -0.46
USP35-207ENST00000530546 PLEKHA7Q6IQ23 1121 aa12.18□□□□□ -0.46
USP35-207ENST00000530546 DCUN1D2Q6PH85 259 aa12.18□□□□□ -0.46
USP35-207ENST00000530546 UBR7Q8N806 425 aa12.18□□□□□ -0.46
USP35-207ENST00000530546 BRI3BPQ8WY22 251 aa12.18□□□□□ -0.46
USP35-207ENST00000530546 KLHL29Q96CT2 875 aa12.18□□□□□ -0.46
USP35-207ENST00000530546 PGM2Q96G03 612 aa12.18□□□□□ -0.46
USP35-207ENST00000530546 MCEEQ96PE7 176 aa12.18□□□□□ -0.46
USP35-207ENST00000530546 XYLT2Q9H1B5 865 aa12.18□□□□□ -0.46
USP35-207ENST00000530546 PARVAQ9NVD7 372 aa12.18□□□□□ -0.46
USP35-207ENST00000530546 ASIC3Q9UHC3 531 aa12.18□□□□□ -0.46
USP35-207ENST00000530546 LRRC37A2A6NM11 1700 aa12.17□□□□□ -0.46
USP35-207ENST00000530546 TLDC2A0PJX2 215 aa12.17□□□□□ -0.46
USP35-207ENST00000530546 DPPA5A6NC42 116 aa12.17□□□□□ -0.46
USP35-207ENST00000530546 UBOX5O94941 541 aa12.17□□□□□ -0.46
USP35-207ENST00000530546 ITGB3P05106 788 aa12.17□□□□□ -0.46
USP35-207ENST00000530546 ASPAP45381 313 aa12.17□□□□□ -0.46
USP35-207ENST00000530546 COPS2P61201 443 aa12.17□□□□□ -0.46
USP35-207ENST00000530546 MXRA7P84157 204 aa12.17□□□□□ -0.46
USP35-207ENST00000530546 KRT17Q04695 432 aa12.17□□□□□ -0.46
USP35-207ENST00000530546 C1QBPQ07021 282 aaKnown RBP12.17□□□□□ -0.46
USP35-207ENST00000530546 TMEM62Q0P6H9 643 aa12.17□□□□□ -0.46
USP35-207ENST00000530546 GRM1Q13255 1194 aa12.17□□□□□ -0.46
USP35-207ENST00000530546 ZNF484Q5JVG2 852 aa12.17□□□□□ -0.46
USP35-207ENST00000530546 JADE1Q6IE81 842 aa12.17□□□□□ -0.46
USP35-207ENST00000530546 DENND1BQ6P3S1 775 aa12.17□□□□□ -0.46
USP35-207ENST00000530546 DNAJC24Q6P3W2 148 aa12.17□□□□□ -0.46
USP35-207ENST00000530546 APBB1IPQ7Z5R6 666 aaPredicted RBP12.17□□□□□ -0.46
USP35-207ENST00000530546 SDCCAG8Q86SQ7 713 aaPredicted RBP12.17□□□□□ -0.46
USP35-207ENST00000530546 CROCCP2Q86T23 111 aa12.17□□□□□ -0.46
USP35-207ENST00000530546 RHOT1Q8IXI2 618 aa12.17□□□□□ -0.46
USP35-207ENST00000530546 LRRC34Q8IZ02 419 aa12.17□□□□□ -0.46
USP35-207ENST00000530546 MDM1Q8TC05 714 aa12.17□□□□□ -0.46
USP35-207ENST00000530546 DTNBP1Q96EV8 351 aa12.17□□□□□ -0.46
USP35-207ENST00000530546 PRMT7Q9NVM4 692 aaPredicted RBP12.17□□□□□ -0.46
USP35-207ENST00000530546 CTNNAL1Q9UBT7 734 aa12.17□□□□□ -0.46
USP35-207ENST00000530546 TNFSF13BQ9Y275 285 aa12.17□□□□□ -0.46
USP35-207ENST00000530546 SCINQ9Y6U3 715 aa12.17□□□□□ -0.46
USP35-207ENST00000530546 PASKQ96RG2 1323 aa12.17□□□□□ -0.46
USP35-207ENST00000530546 EVPLQ92817 2033 aa12.17□□□□□ -0.46
USP35-207ENST00000530546 SHBGP04278 402 aa12.17□□□□□ -0.46
USP35-207ENST00000530546 CETPP11597 493 aa12.17□□□□□ -0.46
USP35-207ENST00000530546 MMP8P22894 467 aa12.17□□□□□ -0.46
USP35-207ENST00000530546 ALDH3A1P30838 453 aa12.17□□□□□ -0.46
USP35-207ENST00000530546 PMS2P54278 862 aa12.17□□□□□ -0.46
USP35-207ENST00000530546 BNIP1Q12981 228 aa12.17□□□□□ -0.46
USP35-207ENST00000530546 CYP1B1Q16678 543 aa12.17□□□□□ -0.46
USP35-207ENST00000530546 MAMDC4Q6UXC1 1216 aa12.17□□□□□ -0.46
USP35-207ENST00000530546 TMEM35BQ8NCS4 154 aa12.17□□□□□ -0.46
USP35-207ENST00000530546 TEKT4Q8WW24 435 aa12.17□□□□□ -0.46
USP35-207ENST00000530546 ELAC2Q9BQ52 826 aaKnown RBP12.17□□□□□ -0.46
USP35-207ENST00000530546 FAM167BQ9BTA0 163 aa12.17□□□□□ -0.46
USP35-207ENST00000530546 ABCF3Q9NUQ8 709 aa12.17□□□□□ -0.46
USP35-207ENST00000530546 DNAJC17Q9NVM6 304 aaKnown RBP12.17□□□□□ -0.46
USP35-207ENST00000530546 TJP2Q9UDY2 1190 aa12.17□□□□□ -0.46
USP35-207ENST00000530546 SIP14410 1827 aa12.17□□□□□ -0.46
USP35-207ENST00000530546 B4GALT4O60513 344 aa12.16□□□□□ -0.46
USP35-207ENST00000530546 PPFIA2O75334 1257 aa12.16□□□□□ -0.46
USP35-207ENST00000530546 SNAI1O95863 264 aaPredicted RBP12.16□□□□□ -0.46
USP35-207ENST00000530546 OAS1P00973 400 aaKnown RBP12.16□□□□□ -0.46
USP35-207ENST00000530546 GBP1P32455 592 aa12.16□□□□□ -0.46
USP35-207ENST00000530546 ZNF667Q5HYK9 610 aa12.16□□□□□ -0.46
USP35-207ENST00000530546 ANKS1BQ7Z6G8 1248 aa12.16□□□□□ -0.46
USP35-207ENST00000530546 WDTC1Q8N5D0 677 aa12.16□□□□□ -0.46
USP35-207ENST00000530546 C1orf127Q8N9H9 656 aa12.16□□□□□ -0.46
USP35-207ENST00000530546 MS4A4AQ96JQ5 239 aa12.16□□□□□ -0.46
USP35-207ENST00000530546 SMYD3Q9H7B4 428 aa12.16□□□□□ -0.46
USP35-207ENST00000530546 CHCHD3Q9NX63 227 aaKnown RBP12.16□□□□□ -0.46
USP35-207ENST00000530546 MTRF1LQ9UGC7 380 aaKnown RBP12.16□□□□□ -0.46
USP35-207ENST00000530546 SIX4Q9UIU6 781 aa12.16□□□□□ -0.46
USP35-207ENST00000530546 IQCA1LA6NCM1 817 aa12.16□□□□□ -0.46
USP35-207ENST00000530546 F8VP50 259 aa12.16□□□□□ -0.46
USP35-207ENST00000530546 H3BRB1 525 aa12.16□□□□□ -0.46
USP35-207ENST00000530546 PDLIM1O00151 329 aa12.16□□□□□ -0.46
USP35-207ENST00000530546 NUDT17P0C025 328 aa12.16□□□□□ -0.46
USP35-207ENST00000530546 KRT10P13645 584 aa12.16□□□□□ -0.46
USP35-207ENST00000530546 ARF4P18085 180 aaPredicted RBP12.16□□□□□ -0.46
USP35-207ENST00000530546 SKIV2L2P42285 1042 aaKnown RBP12.16□□□□□ -0.46
USP35-207ENST00000530546 SPATA21Q7Z572 469 aa12.16□□□□□ -0.46
USP35-207ENST00000530546 ARHGAP22Q7Z5H3 698 aa12.16□□□□□ -0.46
USP35-207ENST00000530546 PRUNE1Q86TP1 453 aa12.16□□□□□ -0.46
USP35-207ENST00000530546 B4GALNT2Q8NHY0 566 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 64.3 ms