RNA–Protein interactions for RNA: ENST00000522165.5

COL13A1-214, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 2,061 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-214ENST00000522165 CD4P01730 458 aa27.28■■□□□ 1.96
COL13A1-214ENST00000522165 ATF7P17544 494 aaPredicted RBP27.28■■□□□ 1.96
COL13A1-214ENST00000522165 CEP85LQ5SZL2 805 aa27.28■■□□□ 1.96
COL13A1-214ENST00000522165 MFSD14CQ5VZR4 134 aa27.28■■□□□ 1.96
COL13A1-214ENST00000522165 POLNQ7Z5Q5 900 aa27.28■■□□□ 1.96
COL13A1-214ENST00000522165 ARFGAP1Q8N6T3 406 aa27.28■■□□□ 1.96
COL13A1-214ENST00000522165 ABT1Q9ULW3 272 aaKnown RBP27.28■■□□□ 1.96
COL13A1-214ENST00000522165 GABRQQ9UN88 632 aa27.28■■□□□ 1.96
COL13A1-214ENST00000522165 PIRO00625 290 aa27.27■■□□□ 1.96
COL13A1-214ENST00000522165 PFKMP08237 780 aa27.27■■□□□ 1.96
COL13A1-214ENST00000522165 PTPN7P35236 360 aa27.27■■□□□ 1.96
COL13A1-214ENST00000522165 PTK6Q13882 451 aa27.27■■□□□ 1.96
COL13A1-214ENST00000522165 SPOCD1Q6ZMY3 1216 aa27.27■■□□□ 1.96
COL13A1-214ENST00000522165 EMC1Q8N766 993 aa27.27■■□□□ 1.96
COL13A1-214ENST00000522165 MTRF1LQ9UGC7 380 aaKnown RBP27.27■■□□□ 1.96
COL13A1-214ENST00000522165 IPPQ9Y573 584 aa27.27■■□□□ 1.96
COL13A1-214ENST00000522165 NME7Q9Y5B8 376 aa27.27■■□□□ 1.96
COL13A1-214ENST00000522165 LRCH4O75427 683 aa27.26■■□□□ 1.95
COL13A1-214ENST00000522165 SLC25A11Q02978 314 aaKnown RBP27.26■■□□□ 1.95
COL13A1-214ENST00000522165 ADCY2Q08462 1091 aa27.26■■□□□ 1.95
COL13A1-214ENST00000522165 SMG8Q8ND04 991 aaKnown RBP27.26■■□□□ 1.95
COL13A1-214ENST00000522165 OR2W6PQ8NHA6 318 aa27.26■■□□□ 1.95
COL13A1-214ENST00000522165 IPO4Q8TEX9 1081 aaKnown RBP27.26■■□□□ 1.95
COL13A1-214ENST00000522165 RAPGEF5Q92565 580 aa27.26■■□□□ 1.95
COL13A1-214ENST00000522165 WHRNQ9P202 907 aa27.26■■□□□ 1.95
COL13A1-214ENST00000522165 GAS8O95995 478 aa27.26■■□□□ 1.95
COL13A1-214ENST00000522165 KRT10P13645 584 aa27.26■■□□□ 1.95
COL13A1-214ENST00000522165 ZNF844Q08AG5 666 aa27.26■■□□□ 1.95
COL13A1-214ENST00000522165 SOWAHAQ2M3V2 549 aa27.26■■□□□ 1.95
COL13A1-214ENST00000522165 GOLGA7BQ2TAP0 167 aa27.26■■□□□ 1.95
COL13A1-214ENST00000522165 PPP1R26Q5T8A7 1209 aaPredicted RBP27.26■■□□□ 1.95
COL13A1-214ENST00000522165 ACOT1Q86TX2 421 aa27.26■■□□□ 1.95
COL13A1-214ENST00000522165 FAM228AQ86W67 206 aa27.26■■□□□ 1.95
COL13A1-214ENST00000522165 UPF3AQ9H1J1 476 aaKnown RBP27.26■■□□□ 1.95
COL13A1-214ENST00000522165 GTF2IRD1Q9UHL9 959 aa27.26■■□□□ 1.95
COL13A1-214ENST00000522165 XPOTO43592 962 aaKnown RBP27.25■■□□□ 1.95
COL13A1-214ENST00000522165 NBPF20Q3BBV1 942 aa27.25■■□□□ 1.95
COL13A1-214ENST00000522165 FBXO47Q5MNV8 452 aa27.25■■□□□ 1.95
COL13A1-214ENST00000522165 UNC93AQ86WB7 457 aa27.25■■□□□ 1.95
COL13A1-214ENST00000522165 ACSF2Q96CM8 615 aaPredicted RBP27.25■■□□□ 1.95
COL13A1-214ENST00000522165 SCN10AQ9Y5Y9 1956 aa27.25■■□□□ 1.95
COL13A1-214ENST00000522165 TJP3O95049 919 aa27.25■■□□□ 1.95
COL13A1-214ENST00000522165 PMS2P54278 862 aa27.25■■□□□ 1.95
COL13A1-214ENST00000522165 MRPS6P82932 125 aaKnown RBP27.25■■□□□ 1.95
COL13A1-214ENST00000522165 CALCOCO2Q13137 446 aa27.25■■□□□ 1.95
COL13A1-214ENST00000522165 PKDCCQ504Y2 493 aa27.25■■□□□ 1.95
COL13A1-214ENST00000522165 ODF2Q5BJF6 829 aa27.25■■□□□ 1.95
COL13A1-214ENST00000522165 KAZNQ674X7 775 aa27.25■■□□□ 1.95
COL13A1-214ENST00000522165 CXCL17Q6UXB2 119 aa27.25■■□□□ 1.95
COL13A1-214ENST00000522165 CCDC114Q96M63 670 aa27.25■■□□□ 1.95
COL13A1-214ENST00000522165 FAM118BQ9BPY3 351 aa27.25■■□□□ 1.95
COL13A1-214ENST00000522165 MIS12Q9H081 205 aa27.25■■□□□ 1.95
COL13A1-214ENST00000522165 TMBIM4Q9HC24 238 aa27.25■■□□□ 1.95
COL13A1-214ENST00000522165 ASIC3Q9UHC3 531 aa27.25■■□□□ 1.95
COL13A1-214ENST00000522165 NEU2Q9Y3R4 380 aa27.25■■□□□ 1.95
COL13A1-214ENST00000522165 hCG_1818297A0A087WSY0 165 aa27.24■■□□□ 1.95
COL13A1-214ENST00000522165 LRRD1A4D1F6 860 aa27.24■■□□□ 1.95
COL13A1-214ENST00000522165 PGK1P00558 417 aa27.24■■□□□ 1.95
COL13A1-214ENST00000522165 IVDP26440 423 aa27.24■■□□□ 1.95
COL13A1-214ENST00000522165 CDKN2BP42772 138 aa27.24■■□□□ 1.95
COL13A1-214ENST00000522165 FLT3LGP49771 235 aa27.24■■□□□ 1.95
COL13A1-214ENST00000522165 TFDP3Q5H9I0 405 aa27.24■■□□□ 1.95
COL13A1-214ENST00000522165 FAM102AQ5T9C2 384 aaPredicted RBP27.24■■□□□ 1.95
COL13A1-214ENST00000522165 ARRDC4Q8NCT1 418 aa27.24■■□□□ 1.95
COL13A1-214ENST00000522165 E5RJQ4 531 aa27.23■■□□□ 1.95
COL13A1-214ENST00000522165 KRT7P08729 469 aa27.23■■□□□ 1.95
COL13A1-214ENST00000522165 IL1R2P27930 398 aa27.23■■□□□ 1.95
COL13A1-214ENST00000522165 HADHQ16836 314 aaKnown RBP27.23■■□□□ 1.95
COL13A1-214ENST00000522165 KCTD16Q68DU8 428 aa27.23■■□□□ 1.95
COL13A1-214ENST00000522165 TWF2Q6IBS0 349 aaKnown RBP27.23■■□□□ 1.95
COL13A1-214ENST00000522165 OR6B3Q8NGW1 331 aa27.23■■□□□ 1.95
COL13A1-214ENST00000522165 ATP6V1G3Q96LB4 118 aa27.23■■□□□ 1.95
COL13A1-214ENST00000522165 ZNF560Q96MR9 790 aa27.23■■□□□ 1.95
COL13A1-214ENST00000522165 EPB41L4BQ9H329 900 aa27.23■■□□□ 1.95
COL13A1-214ENST00000522165 GOLGA6L10A6NI86 522 aa27.23■■□□□ 1.95
COL13A1-214ENST00000522165 C3orf70A6NLC5 250 aaPredicted RBP27.23■■□□□ 1.95
COL13A1-214ENST00000522165 TP73O15350 636 aa27.23■■□□□ 1.95
COL13A1-214ENST00000522165 ITIH2P19823 946 aa27.23■■□□□ 1.95
COL13A1-214ENST00000522165 SOX4Q06945 474 aaPredicted RBP27.23■■□□□ 1.95
COL13A1-214ENST00000522165 ACAP1Q15027 740 aa27.23■■□□□ 1.95
COL13A1-214ENST00000522165 TTC30AQ86WT1 665 aa27.23■■□□□ 1.95
COL13A1-214ENST00000522165 SH2D3CQ8N5H7 860 aa27.23■■□□□ 1.95
COL13A1-214ENST00000522165 SNF8Q96H20 258 aa27.23■■□□□ 1.95
COL13A1-214ENST00000522165 PABPC3Q9H361 631 aaKnown RBP27.23■■□□□ 1.95
COL13A1-214ENST00000522165 FAM49BQ9NUQ9 324 aa27.23■■□□□ 1.95
COL13A1-214ENST00000522165 GDAP2Q9NXN4 497 aa27.23■■□□□ 1.95
COL13A1-214ENST00000522165 CDY2AQ9Y6F7 541 aa27.23■■□□□ 1.95
COL13A1-214ENST00000522165 KPNA7A9QM74 516 aa27.22■■□□□ 1.95
COL13A1-214ENST00000522165 SPTLC1O15269 473 aa27.22■■□□□ 1.95
COL13A1-214ENST00000522165 MYZAPP0CAP1 466 aa27.22■■□□□ 1.95
COL13A1-214ENST00000522165 PNPLA4P41247 253 aa27.22■■□□□ 1.95
COL13A1-214ENST00000522165 GDF6Q6KF10 455 aaPredicted RBP27.22■■□□□ 1.95
COL13A1-214ENST00000522165 FAM183BPQ6ZVS7 135 aa27.22■■□□□ 1.95
COL13A1-214ENST00000522165 ZWILCHQ9H900 591 aa27.22■■□□□ 1.95
COL13A1-214ENST00000522165 SPC25Q9HBM1 224 aa27.22■■□□□ 1.95
COL13A1-214ENST00000522165 TRPV2Q9Y5S1 764 aa27.22■■□□□ 1.95
COL13A1-214ENST00000522165 M0QZ92 97 aa27.21■■□□□ 1.95
COL13A1-214ENST00000522165 CAPN2P17655 700 aa27.21■■□□□ 1.95
COL13A1-214ENST00000522165 NKX3-2P78367 333 aa27.21■■□□□ 1.95
COL13A1-214ENST00000522165 OR6B2Q6IFH4 312 aa27.21■■□□□ 1.95
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms