RNA–Protein interactions for RNA: ENST00000507326.2

HMGB3P15-201, Transcript of high mobility group box 3 pseudogene 15, humanhuman

BASIC

Gene HMGB3P15, Length 574 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P15-201ENST00000507326 KLHL33A6NCF5 533 aa4□□□□□ -1.77
HMGB3P15-201ENST00000507326 TMEM110-MUSTN1A8MSY1 372 aa4□□□□□ -1.77
HMGB3P15-201ENST00000507326 FAM25EA8MYX2 175 aa4□□□□□ -1.77
HMGB3P15-201ENST00000507326 PRR5-ARHGAP8B1AHC4 643 aa4□□□□□ -1.77
HMGB3P15-201ENST00000507326 RASA4BC9J798 803 aa4□□□□□ -1.77
HMGB3P15-201ENST00000507326 F5H0A9 414 aaPredicted RBP4□□□□□ -1.77
HMGB3P15-201ENST00000507326 FAM227AF5H4B4 570 aa4□□□□□ -1.77
HMGB3P15-201ENST00000507326 H0Y3Z8 333 aa4□□□□□ -1.77
HMGB3P15-201ENST00000507326 K7ESF4 209 aa4□□□□□ -1.77
HMGB3P15-201ENST00000507326 AREL1O15033 823 aa4□□□□□ -1.77
HMGB3P15-201ENST00000507326 RASA4O43374 803 aa4□□□□□ -1.77
HMGB3P15-201ENST00000507326 XPOTO43592 962 aaKnown RBP4□□□□□ -1.77
HMGB3P15-201ENST00000507326 AP1G1O43747 822 aa4□□□□□ -1.77
HMGB3P15-201ENST00000507326 DTNBO60941 627 aa4□□□□□ -1.77
HMGB3P15-201ENST00000507326 STARD3NLO95772 234 aa4□□□□□ -1.77
HMGB3P15-201ENST00000507326 HRGP04196 525 aa4□□□□□ -1.77
HMGB3P15-201ENST00000507326 PYGLP06737 847 aa4□□□□□ -1.77
HMGB3P15-201ENST00000507326 ALOX12P18054 663 aa4□□□□□ -1.77
HMGB3P15-201ENST00000507326 CD40P25942 277 aa4□□□□□ -1.77
HMGB3P15-201ENST00000507326 CD38P28907 300 aa4□□□□□ -1.77
HMGB3P15-201ENST00000507326 ATP5DP30049 168 aa4□□□□□ -1.77
HMGB3P15-201ENST00000507326 GALNSP34059 522 aa4□□□□□ -1.77
HMGB3P15-201ENST00000507326 NPTX2P47972 431 aa4□□□□□ -1.77
HMGB3P15-201ENST00000507326 ARL4CP56559 192 aa4□□□□□ -1.77
HMGB3P15-201ENST00000507326 UBXN2AP68543 259 aa4□□□□□ -1.77
HMGB3P15-201ENST00000507326 ZBTB16Q05516 673 aa4□□□□□ -1.77
HMGB3P15-201ENST00000507326 PRKG1Q13976 671 aa4□□□□□ -1.77
HMGB3P15-201ENST00000507326 TAF7Q15545 349 aaPredicted RBP4□□□□□ -1.77
HMGB3P15-201ENST00000507326 CLUL1Q15846 466 aa4□□□□□ -1.77
HMGB3P15-201ENST00000507326 KIAA0753Q2KHM9 967 aa4□□□□□ -1.77
HMGB3P15-201ENST00000507326 ZBTB41Q5SVQ8 909 aa4□□□□□ -1.77
HMGB3P15-201ENST00000507326 CCDC30Q5VVM6 783 aa4□□□□□ -1.77
HMGB3P15-201ENST00000507326 CCDC62Q6P9F0 684 aa4□□□□□ -1.77
HMGB3P15-201ENST00000507326 RUFY3Q7L099 469 aa4□□□□□ -1.77
HMGB3P15-201ENST00000507326 TAS1R1Q7RTX1 841 aa4□□□□□ -1.77
HMGB3P15-201ENST00000507326 RNF168Q8IYW5 571 aaPredicted RBP4□□□□□ -1.77
HMGB3P15-201ENST00000507326 NXPE1Q8N323 547 aa4□□□□□ -1.77
HMGB3P15-201ENST00000507326 TMCO5AQ8N6Q1 288 aa4□□□□□ -1.77
HMGB3P15-201ENST00000507326 MGARPQ8TDB4 240 aa4□□□□□ -1.77
HMGB3P15-201ENST00000507326 TAF4BQ92750 862 aa4□□□□□ -1.77
HMGB3P15-201ENST00000507326 SH3KBP1Q96B97 665 aa4□□□□□ -1.77
HMGB3P15-201ENST00000507326 NAF1Q96HR8 494 aaKnown RBP4□□□□□ -1.77
HMGB3P15-201ENST00000507326 CNDP2Q96KP4 475 aaKnown RBP4□□□□□ -1.77
HMGB3P15-201ENST00000507326 UBXN10Q96LJ8 280 aa4□□□□□ -1.77
HMGB3P15-201ENST00000507326 FAM210AQ96ND0 272 aa4□□□□□ -1.77
HMGB3P15-201ENST00000507326 FDXACB1Q9BRP7 624 aaPredicted RBP4□□□□□ -1.77
HMGB3P15-201ENST00000507326 NAA15Q9BXJ9 866 aaKnown RBP4□□□□□ -1.77
HMGB3P15-201ENST00000507326 PRDM13Q9H4Q3 707 aa4□□□□□ -1.77
HMGB3P15-201ENST00000507326 WDR26Q9H7D7 661 aa4□□□□□ -1.77
HMGB3P15-201ENST00000507326 GRPEL1Q9HAV7 217 aa4□□□□□ -1.77
HMGB3P15-201ENST00000507326 ZCCHC17Q9NP64 241 aaKnown RBP4□□□□□ -1.77
HMGB3P15-201ENST00000507326 ZNHIT6Q9NWK9 470 aaKnown RBP4□□□□□ -1.77
HMGB3P15-201ENST00000507326 WDR35Q9P2L0 1181 aa4□□□□□ -1.77
HMGB3P15-201ENST00000507326 ORC3Q9UBD5 711 aaPredicted RBP4□□□□□ -1.77
HMGB3P15-201ENST00000507326 PCSK1NQ9UHG2 260 aa4□□□□□ -1.77
HMGB3P15-201ENST00000507326 MSRAQ9UJ68 235 aa4□□□□□ -1.77
HMGB3P15-201ENST00000507326 PADI4Q9UM07 663 aa4□□□□□ -1.77
HMGB3P15-201ENST00000507326 CHST2Q9Y4C5 530 aa4□□□□□ -1.77
HMGB3P15-201ENST00000507326 CEP83Q9Y592 693 aa4□□□□□ -1.77
HMGB3P15-201ENST00000507326 UNC119BA6NIH7 251 aa3.99□□□□□ -1.77
HMGB3P15-201ENST00000507326 NEMP1O14524 444 aa3.99□□□□□ -1.77
HMGB3P15-201ENST00000507326 TPP1O14773 563 aa3.99□□□□□ -1.77
HMGB3P15-201ENST00000507326 TPPPO94811 219 aa3.99□□□□□ -1.77
HMGB3P15-201ENST00000507326 SEC24DO94855 1032 aaPredicted RBP3.99□□□□□ -1.77
HMGB3P15-201ENST00000507326 MT-CO1P00395 513 aa3.99□□□□□ -1.77
HMGB3P15-201ENST00000507326 CD4P01730 458 aa3.99□□□□□ -1.77
HMGB3P15-201ENST00000507326 IGHDP01880 384 aa3.99□□□□□ -1.77
HMGB3P15-201ENST00000507326 P4HA1P13674 534 aa3.99□□□□□ -1.77
HMGB3P15-201ENST00000507326 RPS2P15880 293 aaKnown RBP3.99□□□□□ -1.77
HMGB3P15-201ENST00000507326 BPIP17213 487 aa3.99□□□□□ -1.77
HMGB3P15-201ENST00000507326 MUTP22033 750 aa3.99□□□□□ -1.77
HMGB3P15-201ENST00000507326 XPAP23025 273 aaPredicted RBP3.99□□□□□ -1.77
HMGB3P15-201ENST00000507326 PSMA4P25789 261 aaKnown RBP3.99□□□□□ -1.77
HMGB3P15-201ENST00000507326 MSH2P43246 934 aa3.99□□□□□ -1.77
HMGB3P15-201ENST00000507326 PSMC4P43686 418 aa3.99□□□□□ -1.77
HMGB3P15-201ENST00000507326 TNNT3P45378 269 aaPredicted RBP3.99□□□□□ -1.77
HMGB3P15-201ENST00000507326 AVPR1BP47901 424 aa3.99□□□□□ -1.77
HMGB3P15-201ENST00000507326 TM4SF4P48230 202 aa3.99□□□□□ -1.77
HMGB3P15-201ENST00000507326 CSE1LP55060 971 aaKnown RBP3.99□□□□□ -1.77
HMGB3P15-201ENST00000507326 SESN3P58005 492 aa3.99□□□□□ -1.77
HMGB3P15-201ENST00000507326 ARF3P61204 181 aaPredicted RBP3.99□□□□□ -1.77
HMGB3P15-201ENST00000507326 ARF1P84077 181 aaKnown RBP3.99□□□□□ -1.77
HMGB3P15-201ENST00000507326 AKAP17AQ02040 695 aaKnown RBP3.99□□□□□ -1.77
HMGB3P15-201ENST00000507326 NHLH2Q02577 135 aa3.99□□□□□ -1.77
HMGB3P15-201ENST00000507326 MGAT5Q09328 741 aa3.99□□□□□ -1.77
HMGB3P15-201ENST00000507326 LRRC74AQ0VAA2 488 aa3.99□□□□□ -1.77
HMGB3P15-201ENST00000507326 COX10Q12887 443 aa3.99□□□□□ -1.77
HMGB3P15-201ENST00000507326 PPP2R5CQ13362 524 aa3.99□□□□□ -1.77
HMGB3P15-201ENST00000507326 STARD3Q14849 445 aa3.99□□□□□ -1.77
HMGB3P15-201ENST00000507326 ANO4Q32M45 955 aa3.99□□□□□ -1.77
HMGB3P15-201ENST00000507326 C5orf22Q49AR2 442 aa3.99□□□□□ -1.77
HMGB3P15-201ENST00000507326 COLEC12Q5KU26 742 aa3.99□□□□□ -1.77
HMGB3P15-201ENST00000507326 ARMC4Q5T2S8 1044 aa3.99□□□□□ -1.77
HMGB3P15-201ENST00000507326 SLC30A6Q6NXT4 461 aa3.99□□□□□ -1.77
HMGB3P15-201ENST00000507326 CNSTQ6PJW8 725 aa3.99□□□□□ -1.77
HMGB3P15-201ENST00000507326 ESPNLQ6ZVH7 1005 aa3.99□□□□□ -1.77
HMGB3P15-201ENST00000507326 NEK10Q6ZWH5 1172 aa3.99□□□□□ -1.77
HMGB3P15-201ENST00000507326 ARHGAP30Q7Z6I6 1101 aaPredicted RBP3.99□□□□□ -1.77
HMGB3P15-201ENST00000507326 CAMKK1Q8N5S9 505 aa3.99□□□□□ -1.77
HMGB3P15-201ENST00000507326 CPEB3Q8NE35 698 aaKnown RBP3.99□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms