RNA–Protein interactions for RNA: ENST00000496230.5

HCN3-204, Transcript of hyperpolarization activated cyclic nucleotide gated potassium channel 3, humanhuman

TSL 2

Gene HCN3, Length 3,245 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCN3-204ENST00000496230 CEP41Q9BYV8 373 aa12.6□□□□□ -0.39
HCN3-204ENST00000496230 MTRF1LQ9UGC7 380 aaKnown RBP12.6□□□□□ -0.39
HCN3-204ENST00000496230 MYO18AQ92614 2054 aaKnown RBP12.59□□□□□ -0.39
HCN3-204ENST00000496230 TMEM191CA6NGB0 347 aa12.59□□□□□ -0.39
HCN3-204ENST00000496230 HOXA11P31270 313 aaPredicted RBP12.59□□□□□ -0.39
HCN3-204ENST00000496230 GOLGA7BQ2TAP0 167 aa12.59□□□□□ -0.39
HCN3-204ENST00000496230 ZC3H12AQ5D1E8 599 aaKnown RBP12.59□□□□□ -0.39
HCN3-204ENST00000496230 ZNF484Q5JVG2 852 aa12.59□□□□□ -0.39
HCN3-204ENST00000496230 PMF1Q6P1K2 205 aa12.59□□□□□ -0.39
HCN3-204ENST00000496230 JPH2Q9BR39 696 aaPredicted RBP12.59□□□□□ -0.39
HCN3-204ENST00000496230 DCLK3Q9C098 648 aa12.59□□□□□ -0.39
HCN3-204ENST00000496230 ZDHHC18Q9NUE0 388 aa12.59□□□□□ -0.39
HCN3-204ENST00000496230 PRRC2BQ5JSZ5 2229 aaKnown RBP12.59□□□□□ -0.39
HCN3-204ENST00000496230 SCN1AP35498 2009 aa12.59□□□□□ -0.39
HCN3-204ENST00000496230 RGS16O15492 202 aaPredicted RBP12.59□□□□□ -0.39
HCN3-204ENST00000496230 CYP3A5P20815 502 aa12.59□□□□□ -0.39
HCN3-204ENST00000496230 GDF10P55107 478 aa12.59□□□□□ -0.39
HCN3-204ENST00000496230 IZUMO3Q5VZ72 239 aa12.59□□□□□ -0.39
HCN3-204ENST00000496230 FAM43BQ6ZT52 329 aaPredicted RBP12.59□□□□□ -0.39
HCN3-204ENST00000496230 ARFGAP1Q8N6T3 406 aa12.59□□□□□ -0.39
HCN3-204ENST00000496230 FAM71DQ8N9W8 422 aa12.59□□□□□ -0.39
HCN3-204ENST00000496230 SLC5A4Q9NY91 659 aa12.59□□□□□ -0.39
HCN3-204ENST00000496230 BSPRYQ5W0U4 402 aa12.58□□□□□ -0.39
HCN3-204ENST00000496230 CDC42EP4Q9H3Q1 356 aaKnown RBP12.58□□□□□ -0.39
HCN3-204ENST00000496230 VTA1Q9NP79 307 aa12.58□□□□□ -0.39
HCN3-204ENST00000496230 STAU2Q9NUL3 570 aaKnown RBP eCLIP12.58□□□□□ -0.39
HCN3-204ENST00000496230 OTOFQ9HC10 1997 aa12.58□□□□□ -0.4
HCN3-204ENST00000496230 STRNO43815 780 aa12.58□□□□□ -0.4
HCN3-204ENST00000496230 GAS8O95995 478 aa12.58□□□□□ -0.4
HCN3-204ENST00000496230 CDH6P55285 790 aa12.58□□□□□ -0.4
HCN3-204ENST00000496230 BASP1P80723 227 aaKnown RBP12.58□□□□□ -0.4
HCN3-204ENST00000496230 MFSD10Q14728 455 aa12.58□□□□□ -0.4
HCN3-204ENST00000496230 PLEKHA7Q6IQ23 1121 aa12.58□□□□□ -0.4
HCN3-204ENST00000496230 KAT2BQ92831 832 aa12.58□□□□□ -0.4
HCN3-204ENST00000496230 KLF6Q99612 283 aaPredicted RBP12.58□□□□□ -0.4
HCN3-204ENST00000496230 GCOM2Q9BZD3 368 aaPredicted RBP12.58□□□□□ -0.4
HCN3-204ENST00000496230 AP5M1Q9H0R1 490 aa12.58□□□□□ -0.4
HCN3-204ENST00000496230 VPS37BQ9H9H4 285 aa12.58□□□□□ -0.4
HCN3-204ENST00000496230 SAYSD1Q9NPB0 183 aa12.58□□□□□ -0.4
HCN3-204ENST00000496230 IP6K2Q9UHH9 426 aa12.58□□□□□ -0.4
HCN3-204ENST00000496230 LRCH4O75427 683 aa12.58□□□□□ -0.4
HCN3-204ENST00000496230 MIPP30301 263 aa12.58□□□□□ -0.4
HCN3-204ENST00000496230 BYSLQ13895 437 aaKnown RBP12.58□□□□□ -0.4
HCN3-204ENST00000496230 ZKSCAN8Q15776 578 aaPredicted RBP12.58□□□□□ -0.4
HCN3-204ENST00000496230 ARRDC4Q8NCT1 418 aa12.58□□□□□ -0.4
HCN3-204ENST00000496230 ACTL9Q8TC94 416 aa12.58□□□□□ -0.4
HCN3-204ENST00000496230 CASTOR2A6NHX0 329 aa12.57□□□□□ -0.4
HCN3-204ENST00000496230 H0YGN5 161 aa12.57□□□□□ -0.4
HCN3-204ENST00000496230 GOLGA8RI6L899 631 aa12.57□□□□□ -0.4
HCN3-204ENST00000496230 SPTLC1O15269 473 aa12.57□□□□□ -0.4
HCN3-204ENST00000496230 MAGEB2O15479 319 aa12.57□□□□□ -0.4
HCN3-204ENST00000496230 B4GALT4O60513 344 aa12.57□□□□□ -0.4
HCN3-204ENST00000496230 AVILO75366 819 aa12.57□□□□□ -0.4
HCN3-204ENST00000496230 CTGFP29279 349 aa12.57□□□□□ -0.4
HCN3-204ENST00000496230 SOX4Q06945 474 aaPredicted RBP12.57□□□□□ -0.4
HCN3-204ENST00000496230 CRHR2Q13324 411 aa12.57□□□□□ -0.4
HCN3-204ENST00000496230 RXFP2Q8WXD0 754 aa12.57□□□□□ -0.4
HCN3-204ENST00000496230 PAAF1Q9BRP4 392 aa12.57□□□□□ -0.4
HCN3-204ENST00000496230 RHOBTB2Q9BYZ6 727 aa12.57□□□□□ -0.4
HCN3-204ENST00000496230 KATNBL1Q9H079 304 aa12.57□□□□□ -0.4
HCN3-204ENST00000496230 C12orf65Q9H3J6 166 aaKnown RBP12.57□□□□□ -0.4
HCN3-204ENST00000496230 TMBIM4Q9HC24 238 aa12.57□□□□□ -0.4
HCN3-204ENST00000496230 GABRQQ9UN88 632 aa12.57□□□□□ -0.4
HCN3-204ENST00000496230 NFS1Q9Y697 457 aa12.57□□□□□ -0.4
HCN3-204ENST00000496230 SCINQ9Y6U3 715 aa12.57□□□□□ -0.4
HCN3-204ENST00000496230 FSCN2O14926 492 aa12.57□□□□□ -0.4
HCN3-204ENST00000496230 PMM2O15305 246 aa12.57□□□□□ -0.4
HCN3-204ENST00000496230 SPAG7O75391 227 aa12.57□□□□□ -0.4
HCN3-204ENST00000496230 RNF8O76064 485 aa12.57□□□□□ -0.4
HCN3-204ENST00000496230 PROZP22891 400 aa12.57□□□□□ -0.4
HCN3-204ENST00000496230 EIF4BP23588 611 aaKnown RBP12.57□□□□□ -0.4
HCN3-204ENST00000496230 OTUD4Q01804 1114 aaKnown RBP12.57□□□□□ -0.4
HCN3-204ENST00000496230 DHX34Q14147 1143 aaKnown RBP12.57□□□□□ -0.4
HCN3-204ENST00000496230 FAM183BPQ6ZVS7 135 aa12.57□□□□□ -0.4
HCN3-204ENST00000496230 TTC16Q8NEE8 873 aa12.57□□□□□ -0.4
HCN3-204ENST00000496230 DYDC1Q8WWB3 177 aa12.57□□□□□ -0.4
HCN3-204ENST00000496230 SLITRK1Q96PX8 696 aa12.57□□□□□ -0.4
HCN3-204ENST00000496230 TRIM56Q9BRZ2 755 aaKnown RBP12.57□□□□□ -0.4
HCN3-204ENST00000496230 NME7Q9Y5B8 376 aa12.57□□□□□ -0.4
HCN3-204ENST00000496230 A0A1B0GUA9 196 aa12.56□□□□□ -0.4
HCN3-204ENST00000496230 CES2O00748 559 aa12.56□□□□□ -0.4
HCN3-204ENST00000496230 POMCP01189 267 aa12.56□□□□□ -0.4
HCN3-204ENST00000496230 CALB1P05937 261 aa12.56□□□□□ -0.4
HCN3-204ENST00000496230 PECAM1P16284 738 aaPredicted RBP12.56□□□□□ -0.4
HCN3-204ENST00000496230 YY1P25490 414 aa12.56□□□□□ -0.4
HCN3-204ENST00000496230 LSP1P33241 339 aa12.56□□□□□ -0.4
HCN3-204ENST00000496230 SLC26A2P50443 739 aa12.56□□□□□ -0.4
HCN3-204ENST00000496230 RBP5P82980 135 aa12.56□□□□□ -0.4
HCN3-204ENST00000496230 GRB14Q14449 540 aa12.56□□□□□ -0.4
HCN3-204ENST00000496230 SPOCD1Q6ZMY3 1216 aa12.56□□□□□ -0.4
HCN3-204ENST00000496230 PHF13Q86YI8 300 aaPredicted RBP12.56□□□□□ -0.4
HCN3-204ENST00000496230 SRRM1Q8IYB3 904 aaKnown RBP12.56□□□□□ -0.4
HCN3-204ENST00000496230 CCDC13Q8IYE1 715 aa12.56□□□□□ -0.4
HCN3-204ENST00000496230 ZBED8Q8IZ13 594 aa12.56□□□□□ -0.4
HCN3-204ENST00000496230 SH3GL2Q99962 352 aa12.56□□□□□ -0.4
HCN3-204ENST00000496230 F8W810 466 aa12.56□□□□□ -0.4
HCN3-204ENST00000496230 RASGRF2O14827 1237 aa12.56□□□□□ -0.4
HCN3-204ENST00000496230 ASAP2O43150 1006 aa12.56□□□□□ -0.4
HCN3-204ENST00000496230 CILPO75339 1184 aa12.56□□□□□ -0.4
HCN3-204ENST00000496230 NDUFV1P49821 464 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms