RNA–Protein interactions for RNA: ENST00000484581.6

VPS13A-211, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

TSL 2 BASIC

Gene VPS13A, Length 1,155 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-211ENST00000484581 RRAGBQ5VZM2 374 aa5.26□□□□□ -1.57
VPS13A-211ENST00000484581 IGFL4Q6B9Z1 124 aa5.26□□□□□ -1.57
VPS13A-211ENST00000484581 MAMDC4Q6UXC1 1216 aa5.26□□□□□ -1.57
VPS13A-211ENST00000484581 USP30Q70CQ3 517 aa5.26□□□□□ -1.57
VPS13A-211ENST00000484581 LRRTM4Q86VH4 590 aa5.26□□□□□ -1.57
VPS13A-211ENST00000484581 KRT73Q86Y46 540 aa5.26□□□□□ -1.57
VPS13A-211ENST00000484581 PCSK9Q8NBP7 692 aaKnown RBP5.26□□□□□ -1.57
VPS13A-211ENST00000484581 SLC30A5Q8TAD4 765 aa5.26□□□□□ -1.57
VPS13A-211ENST00000484581 CHFRQ96EP1 664 aa5.26□□□□□ -1.57
VPS13A-211ENST00000484581 MYOCQ99972 504 aa5.26□□□□□ -1.57
VPS13A-211ENST00000484581 MRI1Q9BV20 369 aa5.26□□□□□ -1.57
VPS13A-211ENST00000484581 HEYLQ9NQ87 328 aaPredicted RBP5.26□□□□□ -1.57
VPS13A-211ENST00000484581 WASH6PQ9NQA3 447 aa5.26□□□□□ -1.57
VPS13A-211ENST00000484581 BCCIPQ9P287 314 aaKnown RBP eCLIP5.26□□□□□ -1.57
VPS13A-211ENST00000484581 MID2Q9UJV3 735 aa5.26□□□□□ -1.57
VPS13A-211ENST00000484581 RPS6KL1Q9Y6S9 549 aa5.26□□□□□ -1.57
VPS13A-211ENST00000484581 A0A087WZ62 844 aa5.25□□□□□ -1.57
VPS13A-211ENST00000484581 ZNF785A8K8V0 405 aa5.25□□□□□ -1.57
VPS13A-211ENST00000484581 MYO1CO00159 1063 aa5.25□□□□□ -1.57
VPS13A-211ENST00000484581 PJA2O43164 708 aa5.25□□□□□ -1.57
VPS13A-211ENST00000484581 RASSF9O75901 435 aa5.25□□□□□ -1.57
VPS13A-211ENST00000484581 MBD4O95243 580 aa5.25□□□□□ -1.57
VPS13A-211ENST00000484581 TNFRSF6BO95407 300 aa5.25□□□□□ -1.57
VPS13A-211ENST00000484581 CHEK2O96017 543 aa5.25□□□□□ -1.57
VPS13A-211ENST00000484581 SNRPA1P09661 255 aaKnown RBP5.25□□□□□ -1.57
VPS13A-211ENST00000484581 ALAS1P13196 640 aa5.25□□□□□ -1.57
VPS13A-211ENST00000484581 EGR1P18146 543 aa5.25□□□□□ -1.57
VPS13A-211ENST00000484581 SLC6A4P31645 630 aa5.25□□□□□ -1.57
VPS13A-211ENST00000484581 HIBADHP31937 336 aaKnown RBP5.25□□□□□ -1.57
VPS13A-211ENST00000484581 ADCY7P51828 1080 aa5.25□□□□□ -1.57
VPS13A-211ENST00000484581 UCP3P55916 312 aa5.25□□□□□ -1.57
VPS13A-211ENST00000484581 POLE2P56282 527 aa5.25□□□□□ -1.57
VPS13A-211ENST00000484581 WNT3P56703 355 aa5.25□□□□□ -1.57
VPS13A-211ENST00000484581 MPP1Q00013 466 aa5.25□□□□□ -1.57
VPS13A-211ENST00000484581 DPTQ07507 201 aa5.25□□□□□ -1.57
VPS13A-211ENST00000484581 G3BP1Q13283 466 aaKnown RBP eCLIP5.25□□□□□ -1.57
VPS13A-211ENST00000484581 ADCK5Q3MIX3 580 aa5.25□□□□□ -1.57
VPS13A-211ENST00000484581 C1orf122Q6ZSJ8 110 aa5.25□□□□□ -1.57
VPS13A-211ENST00000484581 GATAD2AQ86YP4 633 aa5.25□□□□□ -1.57
VPS13A-211ENST00000484581 CMTM4Q8IZR5 234 aa5.25□□□□□ -1.57
VPS13A-211ENST00000484581 MPP5Q8N3R9 675 aa5.25□□□□□ -1.57
VPS13A-211ENST00000484581 SLC15A4Q8N697 577 aa5.25□□□□□ -1.57
VPS13A-211ENST00000484581 ANKRD53Q8N9V6 530 aa5.25□□□□□ -1.57
VPS13A-211ENST00000484581 OR5M3Q8NGP4 307 aa5.25□□□□□ -1.57
VPS13A-211ENST00000484581 NELL2Q99435 816 aa5.25□□□□□ -1.57
VPS13A-211ENST00000484581 PYM1Q9BRP8 204 aaKnown RBP5.25□□□□□ -1.57
VPS13A-211ENST00000484581 FAM167BQ9BTA0 163 aa5.25□□□□□ -1.57
VPS13A-211ENST00000484581 CNPPD1Q9BV87 410 aa5.25□□□□□ -1.57
VPS13A-211ENST00000484581 TINAGL1Q9GZM7 467 aaPredicted RBP5.25□□□□□ -1.57
VPS13A-211ENST00000484581 DDX24Q9GZR7 859 aaKnown RBP eCLIP5.25□□□□□ -1.57
VPS13A-211ENST00000484581 SIK2Q9H0K1 926 aa5.25□□□□□ -1.57
VPS13A-211ENST00000484581 MSL2Q9HCI7 577 aa5.25□□□□□ -1.57
VPS13A-211ENST00000484581 TBC1D23Q9NUY8 699 aa5.25□□□□□ -1.57
VPS13A-211ENST00000484581 SLC13A4Q9UKG4 626 aa5.25□□□□□ -1.57
VPS13A-211ENST00000484581 HDAC9Q9UKV0 1011 aa5.25□□□□□ -1.57
VPS13A-211ENST00000484581 TMX2Q9Y320 296 aa5.25□□□□□ -1.57
VPS13A-211ENST00000484581 ZMYM3Q14202 1370 aa5.25□□□□□ -1.57
VPS13A-211ENST00000484581 ITIH6Q6UXX5 1313 aa5.24□□□□□ -1.57
VPS13A-211ENST00000484581 TCRBV7S2A1N4TA0A589 114 aa5.24□□□□□ -1.57
VPS13A-211ENST00000484581 PIP5K1BO14986 540 aa5.24□□□□□ -1.57
VPS13A-211ENST00000484581 ASNA1O43681 348 aa5.24□□□□□ -1.57
VPS13A-211ENST00000484581 SNX2O60749 519 aa5.24□□□□□ -1.57
VPS13A-211ENST00000484581 RNASEH2AO75792 299 aaKnown RBP5.24□□□□□ -1.57
VPS13A-211ENST00000484581 ITGA2BP08514 1039 aa5.24□□□□□ -1.57
VPS13A-211ENST00000484581 PIM1P11309 404 aaPredicted RBP5.24□□□□□ -1.57
VPS13A-211ENST00000484581 ACRV1P26436 265 aa5.24□□□□□ -1.57
VPS13A-211ENST00000484581 ACVR2AP27037 513 aa5.24□□□□□ -1.57
VPS13A-211ENST00000484581 MSX2P35548 267 aaPredicted RBP5.24□□□□□ -1.57
VPS13A-211ENST00000484581 ZNF135P52742 658 aaPredicted RBP5.24□□□□□ -1.57
VPS13A-211ENST00000484581 PSMC1P62191 440 aaKnown RBP5.24□□□□□ -1.57
VPS13A-211ENST00000484581 HGFACQ04756 655 aa5.24□□□□□ -1.57
VPS13A-211ENST00000484581 DUSP8Q13202 625 aa5.24□□□□□ -1.57
VPS13A-211ENST00000484581 SMN1Q16637 294 aaKnown RBP5.24□□□□□ -1.57
VPS13A-211ENST00000484581 TBR1Q16650 682 aa5.24□□□□□ -1.57
VPS13A-211ENST00000484581 TIGD6Q17RP2 521 aa5.24□□□□□ -1.57
VPS13A-211ENST00000484581 FAAH2Q6GMR7 532 aa5.24□□□□□ -1.57
VPS13A-211ENST00000484581 SULT6B1Q6IMI4 303 aa5.24□□□□□ -1.57
VPS13A-211ENST00000484581 ZNF529Q6P280 563 aa5.24□□□□□ -1.57
VPS13A-211ENST00000484581 MOGAT3Q86VF5 341 aa5.24□□□□□ -1.57
VPS13A-211ENST00000484581 SGMS1Q86VZ5 419 aa5.24□□□□□ -1.57
VPS13A-211ENST00000484581 TMTC1Q8IUR5 882 aa5.24□□□□□ -1.57
VPS13A-211ENST00000484581 AMER2Q8N7J2 671 aa5.24□□□□□ -1.57
VPS13A-211ENST00000484581 SIMC1Q8NDZ2 872 aa5.24□□□□□ -1.57
VPS13A-211ENST00000484581 OTUD7AQ8TE49 926 aaPredicted RBP5.24□□□□□ -1.57
VPS13A-211ENST00000484581 NEU4Q8WWR8 484 aaPredicted RBP5.24□□□□□ -1.57
VPS13A-211ENST00000484581 CFHR4Q92496 578 aa5.24□□□□□ -1.57
VPS13A-211ENST00000484581 SCAMP4Q969E2 229 aa5.24□□□□□ -1.57
VPS13A-211ENST00000484581 SPATA5L1Q9BVQ7 753 aa5.24□□□□□ -1.57
VPS13A-211ENST00000484581 SLC26A6Q9BXS9 759 aa5.24□□□□□ -1.57
VPS13A-211ENST00000484581 DHX36Q9H2U1 1008 aaKnown RBP5.24□□□□□ -1.57
VPS13A-211ENST00000484581 NELFAQ9H3P2 528 aa5.24□□□□□ -1.57
VPS13A-211ENST00000484581 SAYSD1Q9NPB0 183 aa5.24□□□□□ -1.57
VPS13A-211ENST00000484581 UBN1Q9NPG3 1134 aa5.24□□□□□ -1.57
VPS13A-211ENST00000484581 PLA2G3Q9NZ20 509 aa5.24□□□□□ -1.57
VPS13A-211ENST00000484581 FAM30AQ9NZY2 134 aa5.24□□□□□ -1.57
VPS13A-211ENST00000484581 KIF17Q9P2E2 1029 aa5.24□□□□□ -1.57
VPS13A-211ENST00000484581 SRP68Q9UHB9 627 aaKnown RBP5.24□□□□□ -1.57
VPS13A-211ENST00000484581 HERC5Q9UII4 1024 aaKnown RBP5.24□□□□□ -1.57
VPS13A-211ENST00000484581 CAPN11Q9UMQ6 739 aa5.24□□□□□ -1.57
VPS13A-211ENST00000484581 A0A0B4J269 797 aa5.23□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms