RNA–Protein interactions for RNA: ENST00000471261.2

PPP1R3F-204, Transcript of protein phosphatase 1 regulatory subunit 3F, humanhuman

TSL 3

Gene PPP1R3F, Length 503 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1R3F-204ENST00000471261 DCAF17Q5H9S7 520 aaPredicted RBP13.47□□□□□ -0.25
PPP1R3F-204ENST00000471261 GPR158Q5T848 1215 aa13.47□□□□□ -0.25
PPP1R3F-204ENST00000471261 TCERG1LQ5VWI1 586 aa13.47□□□□□ -0.25
PPP1R3F-204ENST00000471261 SPOPLQ6IQ16 392 aa13.47□□□□□ -0.25
PPP1R3F-204ENST00000471261 FAM171BQ6P995 826 aa13.47□□□□□ -0.25
PPP1R3F-204ENST00000471261 GPIHBP1Q8IV16 184 aa13.47□□□□□ -0.25
PPP1R3F-204ENST00000471261 TAS1R2Q8TE23 839 aa13.47□□□□□ -0.25
PPP1R3F-204ENST00000471261 ELSPBP1Q96BH3 223 aa13.47□□□□□ -0.25
PPP1R3F-204ENST00000471261 PCED1BQ96HM7 432 aa13.47□□□□□ -0.25
PPP1R3F-204ENST00000471261 FUBP3Q96I24 572 aaKnown RBP eCLIP13.47□□□□□ -0.25
PPP1R3F-204ENST00000471261 PLA2G2FQ9BZM2 168 aa13.47□□□□□ -0.25
PPP1R3F-204ENST00000471261 GPR88Q9GZN0 384 aa13.47□□□□□ -0.25
PPP1R3F-204ENST00000471261 VRTNQ9H8Y1 702 aa13.47□□□□□ -0.25
PPP1R3F-204ENST00000471261 WNT16Q9UBV4 365 aa13.47□□□□□ -0.25
PPP1R3F-204ENST00000471261 SLC16A3O15427 465 aaKnown RBP13.46□□□□□ -0.25
PPP1R3F-204ENST00000471261 ASS1P00966 412 aaKnown RBP13.46□□□□□ -0.25
PPP1R3F-204ENST00000471261 CSH1P0DML2 217 aa13.46□□□□□ -0.25
PPP1R3F-204ENST00000471261 CSH2P0DML3 217 aa13.46□□□□□ -0.25
PPP1R3F-204ENST00000471261 CD44P16070 742 aaKnown RBP13.46□□□□□ -0.25
PPP1R3F-204ENST00000471261 PTPN1P18031 435 aaKnown RBP13.46□□□□□ -0.25
PPP1R3F-204ENST00000471261 FCARP24071 287 aa13.46□□□□□ -0.25
PPP1R3F-204ENST00000471261 VIPR2P41587 438 aa13.46□□□□□ -0.25
PPP1R3F-204ENST00000471261 VCPP55072 806 aaKnown RBP13.46□□□□□ -0.25
PPP1R3F-204ENST00000471261 B3GALNT2Q8NCR0 500 aa13.46□□□□□ -0.25
PPP1R3F-204ENST00000471261 CCDC150Q8NCX0 1101 aa13.46□□□□□ -0.25
PPP1R3F-204ENST00000471261 MYCBPAPQ8TBZ2 947 aa13.46□□□□□ -0.25
PPP1R3F-204ENST00000471261 TAF4BQ92750 862 aa13.46□□□□□ -0.25
PPP1R3F-204ENST00000471261 DHTKD1Q96HY7 919 aaPredicted RBP13.46□□□□□ -0.25
PPP1R3F-204ENST00000471261 MKNK1Q9BUB5 465 aa13.46□□□□□ -0.25
PPP1R3F-204ENST00000471261 TMEM8AQ9HCN3 771 aa13.46□□□□□ -0.25
PPP1R3F-204ENST00000471261 ARHGEF3Q9NR81 526 aa13.46□□□□□ -0.25
PPP1R3F-204ENST00000471261 SLC2A4RGQ9NR83 387 aa13.46□□□□□ -0.25
PPP1R3F-204ENST00000471261 NME7Q9Y5B8 376 aa13.46□□□□□ -0.25
PPP1R3F-204ENST00000471261 ZDBF2Q9HCK1 2354 aa13.46□□□□□ -0.25
PPP1R3F-204ENST00000471261 KRBA1A5PL33 1030 aa13.45□□□□□ -0.26
PPP1R3F-204ENST00000471261 SLC38A8A6NNN8 435 aa13.45□□□□□ -0.26
PPP1R3F-204ENST00000471261 DPYSL4O14531 572 aa13.45□□□□□ -0.26
PPP1R3F-204ENST00000471261 STX10O60499 249 aa13.45□□□□□ -0.26
PPP1R3F-204ENST00000471261 FAM163BP0C2L3 166 aa13.45□□□□□ -0.26
PPP1R3F-204ENST00000471261 HMGA1P17096 107 aaKnown RBP13.45□□□□□ -0.26
PPP1R3F-204ENST00000471261 BMP6P22004 513 aa13.45□□□□□ -0.26
PPP1R3F-204ENST00000471261 CCNE1P24864 410 aa13.45□□□□□ -0.26
PPP1R3F-204ENST00000471261 ANXA13P27216 316 aa13.45□□□□□ -0.26
PPP1R3F-204ENST00000471261 PPP1R2P41236 205 aa13.45□□□□□ -0.26
PPP1R3F-204ENST00000471261 MXI1P50539 228 aa13.45□□□□□ -0.26
PPP1R3F-204ENST00000471261 NOP14P78316 857 aaKnown RBP13.45□□□□□ -0.26
PPP1R3F-204ENST00000471261 ENPEPQ07075 957 aa13.45□□□□□ -0.26
PPP1R3F-204ENST00000471261 ORC1Q13415 861 aa13.45□□□□□ -0.26
PPP1R3F-204ENST00000471261 MORC3Q14149 939 aa13.45□□□□□ -0.26
PPP1R3F-204ENST00000471261 IER5LQ5T953 404 aa13.45□□□□□ -0.26
PPP1R3F-204ENST00000471261 KRT39Q6A163 491 aa13.45□□□□□ -0.26
PPP1R3F-204ENST00000471261 ASTLQ6HA08 431 aaPredicted RBP13.45□□□□□ -0.26
PPP1R3F-204ENST00000471261 VSTM1Q6UX27 236 aa13.45□□□□□ -0.26
PPP1R3F-204ENST00000471261 NELFBQ8WX92 580 aa13.45□□□□□ -0.26
PPP1R3F-204ENST00000471261 MED10Q9BTT4 135 aa13.45□□□□□ -0.26
PPP1R3F-204ENST00000471261 TRMT61BQ9BVS5 477 aaKnown RBP13.45□□□□□ -0.26
PPP1R3F-204ENST00000471261 SDCBP2Q9H190 292 aa13.45□□□□□ -0.26
PPP1R3F-204ENST00000471261 CTNND2Q9UQB3 1225 aa13.45□□□□□ -0.26
PPP1R3F-204ENST00000471261 HEPACAM2A8MVW5 462 aa13.44□□□□□ -0.26
PPP1R3F-204ENST00000471261 CLDN5O00501 218 aa13.44□□□□□ -0.26
PPP1R3F-204ENST00000471261 TRIM66O15016 1216 aa13.44□□□□□ -0.26
PPP1R3F-204ENST00000471261 NPR3P17342 541 aa13.44□□□□□ -0.26
PPP1R3F-204ENST00000471261 PSMC3P17980 439 aa13.44□□□□□ -0.26
PPP1R3F-204ENST00000471261 AVPR2P30518 371 aa13.44□□□□□ -0.26
PPP1R3F-204ENST00000471261 GTF2H1P32780 548 aa13.44□□□□□ -0.26
PPP1R3F-204ENST00000471261 MAGEA11P43364 429 aa13.44□□□□□ -0.26
PPP1R3F-204ENST00000471261 ASPAP45381 313 aa13.44□□□□□ -0.26
PPP1R3F-204ENST00000471261 NDST1P52848 882 aa13.44□□□□□ -0.26
PPP1R3F-204ENST00000471261 NLRP12P59046 1061 aa13.44□□□□□ -0.26
PPP1R3F-204ENST00000471261 PFKPQ01813 784 aa13.44□□□□□ -0.26
PPP1R3F-204ENST00000471261 VITQ6UXI7 678 aa13.44□□□□□ -0.26
PPP1R3F-204ENST00000471261 ACOT1Q86TX2 421 aa13.44□□□□□ -0.26
PPP1R3F-204ENST00000471261 ARID3BQ8IVW6 561 aaPredicted RBP13.44□□□□□ -0.26
PPP1R3F-204ENST00000471261 YAF2Q8IY57 180 aa13.44□□□□□ -0.26
PPP1R3F-204ENST00000471261 TNIP3Q96KP6 325 aa13.44□□□□□ -0.26
PPP1R3F-204ENST00000471261 ZNF518BQ9C0D4 1074 aa13.44□□□□□ -0.26
PPP1R3F-204ENST00000471261 SMG9Q9H0W8 520 aaKnown RBP13.44□□□□□ -0.26
PPP1R3F-204ENST00000471261 TASP1Q9H6P5 420 aa13.44□□□□□ -0.26
PPP1R3F-204ENST00000471261 BRD9Q9H8M2 597 aa13.44□□□□□ -0.26
PPP1R3F-204ENST00000471261 TBC1D17Q9HA65 648 aa13.44□□□□□ -0.26
PPP1R3F-204ENST00000471261 IL21Q9HBE4 155 aa13.44□□□□□ -0.26
PPP1R3F-204ENST00000471261 APOBEC3GQ9HC16 384 aaKnown RBP13.44□□□□□ -0.26
PPP1R3F-204ENST00000471261 TRPC7Q9HCX4 862 aa13.44□□□□□ -0.26
PPP1R3F-204ENST00000471261 UXTQ9UBK9 157 aaPredicted RBP13.44□□□□□ -0.26
PPP1R3F-204ENST00000471261 ARMCX3Q9UH62 379 aaPredicted RBP13.44□□□□□ -0.26
PPP1R3F-204ENST00000471261 BICDL2A1A5D9 508 aa13.43□□□□□ -0.26
PPP1R3F-204ENST00000471261 PPP1R3GB7ZBB8 358 aa13.43□□□□□ -0.26
PPP1R3F-204ENST00000471261 F8VP50 259 aa13.43□□□□□ -0.26
PPP1R3F-204ENST00000471261 NOL4O94818 638 aa13.43□□□□□ -0.26
PPP1R3F-204ENST00000471261 CD58P19256 250 aa13.43□□□□□ -0.26
PPP1R3F-204ENST00000471261 GDI1P31150 447 aa13.43□□□□□ -0.26
PPP1R3F-204ENST00000471261 AVPR1AP37288 418 aa13.43□□□□□ -0.26
PPP1R3F-204ENST00000471261 STX17P56962 302 aa13.43□□□□□ -0.26
PPP1R3F-204ENST00000471261 CCDC40Q4G0X9 1142 aa13.43□□□□□ -0.26
PPP1R3F-204ENST00000471261 SLC44A4Q53GD3 710 aa13.43□□□□□ -0.26
PPP1R3F-204ENST00000471261 CWF19L1Q69YN2 538 aaKnown RBP13.43□□□□□ -0.26
PPP1R3F-204ENST00000471261 TXNDC8Q6A555 127 aa13.43□□□□□ -0.26
PPP1R3F-204ENST00000471261 TMEM150AQ86TG1 271 aa13.43□□□□□ -0.26
PPP1R3F-204ENST00000471261 ZC3H3Q8IXZ2 948 aaKnown RBP13.43□□□□□ -0.26
PPP1R3F-204ENST00000471261 TMEM105Q8N8V8 129 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms