RNA–Protein interactions for RNA: ENST00000464938.1

NUCKS1-202, Transcript of nuclear casein kinase and cyclin dependent kinase substrate 1, humanhuman

TSL 2

Gene NUCKS1, Length 228 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUCKS1-202ENST00000464938 HLA-DOAP06340 250 aa2.33□□□□□ -2.04
NUCKS1-202ENST00000464938 CSF1RP07333 972 aa2.33□□□□□ -2.04
NUCKS1-202ENST00000464938 C1SP09871 688 aa2.33□□□□□ -2.04
NUCKS1-202ENST00000464938 SRGNP10124 158 aa2.33□□□□□ -2.04
NUCKS1-202ENST00000464938 EGR2P11161 476 aaPredicted RBP2.33□□□□□ -2.04
NUCKS1-202ENST00000464938 HARSP12081 509 aaKnown RBP2.33□□□□□ -2.04
NUCKS1-202ENST00000464938 KCNA3P22001 575 aa2.33□□□□□ -2.04
NUCKS1-202ENST00000464938 DDX6P26196 483 aaKnown RBP eCLIP2.33□□□□□ -2.04
NUCKS1-202ENST00000464938 IL1R2P27930 398 aa2.33□□□□□ -2.04
NUCKS1-202ENST00000464938 GABRB3P28472 473 aa2.33□□□□□ -2.04
NUCKS1-202ENST00000464938 PPIFP30405 207 aaKnown RBP2.33□□□□□ -2.04
NUCKS1-202ENST00000464938 LRPAP1P30533 357 aa2.33□□□□□ -2.04
NUCKS1-202ENST00000464938 PPM1AP35813 382 aa2.33□□□□□ -2.04
NUCKS1-202ENST00000464938 HSPA7P48741 367 aa2.33□□□□□ -2.04
NUCKS1-202ENST00000464938 CARSP49589 748 aaKnown RBP2.33□□□□□ -2.04
NUCKS1-202ENST00000464938 HNRNPMP52272 730 aaKnown RBP eCLIP2.33□□□□□ -2.04
NUCKS1-202ENST00000464938 LOXL3P58215 753 aa2.33□□□□□ -2.04
NUCKS1-202ENST00000464938 RESTQ13127 1097 aa2.33□□□□□ -2.04
NUCKS1-202ENST00000464938 OS9Q13438 667 aaPredicted RBP2.33□□□□□ -2.04
NUCKS1-202ENST00000464938 FOXE3Q13461 319 aa2.33□□□□□ -2.04
NUCKS1-202ENST00000464938 PMS2P11Q13670 270 aa2.33□□□□□ -2.04
NUCKS1-202ENST00000464938 GEN1Q17RS7 908 aa2.33□□□□□ -2.04
NUCKS1-202ENST00000464938 SLC35G1Q2M3R5 365 aa2.33□□□□□ -2.04
NUCKS1-202ENST00000464938 ZNF750Q32MQ0 723 aa2.33□□□□□ -2.04
NUCKS1-202ENST00000464938 ARL13BQ3SXY8 428 aa2.33□□□□□ -2.04
NUCKS1-202ENST00000464938 PLA1AQ53H76 456 aa2.33□□□□□ -2.04
NUCKS1-202ENST00000464938 C10orf62Q5T681 223 aaPredicted RBP2.33□□□□□ -2.04
NUCKS1-202ENST00000464938 KIAA0895LQ68EN5 471 aa2.33□□□□□ -2.04
NUCKS1-202ENST00000464938 ERAP2Q6P179 960 aa2.33□□□□□ -2.04
NUCKS1-202ENST00000464938 FOXR2Q6PJQ5 311 aa2.33□□□□□ -2.04
NUCKS1-202ENST00000464938 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP2.33□□□□□ -2.04
NUCKS1-202ENST00000464938 KIAA0408Q6ZU52 694 aa2.33□□□□□ -2.04
NUCKS1-202ENST00000464938 BEND5Q7L4P6 421 aa2.33□□□□□ -2.04
NUCKS1-202ENST00000464938 SPRED1Q7Z699 444 aa2.33□□□□□ -2.04
NUCKS1-202ENST00000464938 MRGPREQ86SM8 312 aa2.33□□□□□ -2.04
NUCKS1-202ENST00000464938 ZNF280BQ86YH2 543 aa2.33□□□□□ -2.04
NUCKS1-202ENST00000464938 FAM9AQ8IZU1 332 aaPredicted RBP2.33□□□□□ -2.04
NUCKS1-202ENST00000464938 LNX2Q8N448 690 aa2.33□□□□□ -2.04
NUCKS1-202ENST00000464938 PCSK9Q8NBP7 692 aaKnown RBP2.33□□□□□ -2.04
NUCKS1-202ENST00000464938 CPEB3Q8NE35 698 aaKnown RBP2.33□□□□□ -2.04
NUCKS1-202ENST00000464938 SLC25A43Q8WUT9 341 aaPredicted RBP2.33□□□□□ -2.04
NUCKS1-202ENST00000464938 KIAA1191Q96A73 305 aa2.33□□□□□ -2.04
NUCKS1-202ENST00000464938 IQCDQ96DY2 449 aa2.33□□□□□ -2.04
NUCKS1-202ENST00000464938 TMEM41AQ96HV5 264 aa2.33□□□□□ -2.04
NUCKS1-202ENST00000464938 TTLL2Q9BWV7 592 aa2.33□□□□□ -2.04
NUCKS1-202ENST00000464938 EIF2AQ9BY44 585 aaKnown RBP2.33□□□□□ -2.04
NUCKS1-202ENST00000464938 ALOXE3Q9BYJ1 711 aa2.33□□□□□ -2.04
NUCKS1-202ENST00000464938 TRIM5Q9C035 493 aa2.33□□□□□ -2.04
NUCKS1-202ENST00000464938 FAM83DQ9H4H8 585 aa2.33□□□□□ -2.04
NUCKS1-202ENST00000464938 TMEM8AQ9HCN3 771 aa2.33□□□□□ -2.04
NUCKS1-202ENST00000464938 GJB4Q9NTQ9 266 aa2.33□□□□□ -2.04
NUCKS1-202ENST00000464938 INTS13Q9NVM9 706 aa2.33□□□□□ -2.04
NUCKS1-202ENST00000464938 RNF181Q9P0P0 153 aa2.33□□□□□ -2.04
NUCKS1-202ENST00000464938 SHOC2Q9UQ13 582 aa2.33□□□□□ -2.04
NUCKS1-202ENST00000464938 SSX2IPQ9Y2D8 614 aa2.33□□□□□ -2.04
NUCKS1-202ENST00000464938 MAP3K2Q9Y2U5 619 aa2.33□□□□□ -2.04
NUCKS1-202ENST00000464938 DAAM1Q9Y4D1 1078 aa2.33□□□□□ -2.04
NUCKS1-202ENST00000464938 RIPOR2Q9Y4F9 1068 aa2.33□□□□□ -2.04
NUCKS1-202ENST00000464938 COL4A3Q01955 1670 aa2.32□□□□□ -2.04
NUCKS1-202ENST00000464938 A0A087WV62 115 aa2.32□□□□□ -2.04
NUCKS1-202ENST00000464938 PIPSLA2A3N6 862 aa2.32□□□□□ -2.04
NUCKS1-202ENST00000464938 WDR27A2RRH5 827 aa2.32□□□□□ -2.04
NUCKS1-202ENST00000464938 PLEKHD1A6NEE1 506 aa2.32□□□□□ -2.04
NUCKS1-202ENST00000464938 OR2W5A6NFC9 320 aa2.32□□□□□ -2.04
NUCKS1-202ENST00000464938 ZAR1LA6NP61 321 aa2.32□□□□□ -2.04
NUCKS1-202ENST00000464938 MYO1CO00159 1063 aa2.32□□□□□ -2.04
NUCKS1-202ENST00000464938 HNRNPDLO14979 420 aaKnown RBP2.32□□□□□ -2.04
NUCKS1-202ENST00000464938 ADAMTS3O15072 1205 aa2.32□□□□□ -2.04
NUCKS1-202ENST00000464938 THAP12O43422 761 aa2.32□□□□□ -2.04
NUCKS1-202ENST00000464938 PPFIA4O75335 1185 aa2.32□□□□□ -2.04
NUCKS1-202ENST00000464938 CDKL5O76039 1030 aa2.32□□□□□ -2.04
NUCKS1-202ENST00000464938 INMTO95050 263 aa2.32□□□□□ -2.04
NUCKS1-202ENST00000464938 TYRP1P17643 537 aa2.32□□□□□ -2.04
NUCKS1-202ENST00000464938 LAG3P18627 525 aa2.32□□□□□ -2.04
NUCKS1-202ENST00000464938 ABCB4P21439 1286 aa2.32□□□□□ -2.04
NUCKS1-202ENST00000464938 EEF1GP26641 437 aaKnown RBP2.32□□□□□ -2.04
NUCKS1-202ENST00000464938 ACVR2AP27037 513 aa2.32□□□□□ -2.04
NUCKS1-202ENST00000464938 NPTX2P47972 431 aa2.32□□□□□ -2.04
NUCKS1-202ENST00000464938 NDUFV1P49821 464 aa2.32□□□□□ -2.04
NUCKS1-202ENST00000464938 COPAP53621 1224 aa2.32□□□□□ -2.04
NUCKS1-202ENST00000464938 LILRA4P59901 499 aa2.32□□□□□ -2.04
NUCKS1-202ENST00000464938 DGCR2P98153 550 aa2.32□□□□□ -2.04
NUCKS1-202ENST00000464938 FPGSQ05932 587 aa2.32□□□□□ -2.04
NUCKS1-202ENST00000464938 MYO1EQ12965 1108 aa2.32□□□□□ -2.04
NUCKS1-202ENST00000464938 FHL3Q13643 280 aa2.32□□□□□ -2.04
NUCKS1-202ENST00000464938 ARHGEF7Q14155 803 aa2.32□□□□□ -2.04
NUCKS1-202ENST00000464938 INSCQ1MX18 579 aa2.32□□□□□ -2.04
NUCKS1-202ENST00000464938 SPDYE7PQ495Y7 208 aa2.32□□□□□ -2.04
NUCKS1-202ENST00000464938 CD300EQ496F6 205 aaPredicted RBP2.32□□□□□ -2.04
NUCKS1-202ENST00000464938 NRN1LQ496H8 165 aa2.32□□□□□ -2.04
NUCKS1-202ENST00000464938 VPS53Q5VIR6 699 aa2.32□□□□□ -2.04
NUCKS1-202ENST00000464938 PLAG1Q6DJT9 500 aa2.32□□□□□ -2.04
NUCKS1-202ENST00000464938 SFRP4Q6FHJ7 346 aaPredicted RBP2.32□□□□□ -2.04
NUCKS1-202ENST00000464938 VWA1Q6PCB0 445 aa2.32□□□□□ -2.04
NUCKS1-202ENST00000464938 USP17L6PQ6QN14 398 aa2.32□□□□□ -2.04
NUCKS1-202ENST00000464938 TMEM108Q6UXF1 575 aa2.32□□□□□ -2.04
NUCKS1-202ENST00000464938 SLC30A10Q6XR72 485 aa2.32□□□□□ -2.04
NUCKS1-202ENST00000464938 RNF44Q7L0R7 432 aa2.32□□□□□ -2.04
NUCKS1-202ENST00000464938 GPR149Q86SP6 731 aa2.32□□□□□ -2.04
NUCKS1-202ENST00000464938 DTX2Q86UW9 622 aa2.32□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 74.8 ms