RNA–Protein interactions for RNA: ENST00000462613.1

SF3B1-206, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 3

Gene SF3B1, Length 141 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-206ENST00000462613 RAPGEF1Q13905 1077 aa6.78□□□□□ -1.32
SF3B1-206ENST00000462613 KCNC3Q14003 757 aa6.78□□□□□ -1.32
SF3B1-206ENST00000462613 CBX2Q14781 532 aaPredicted RBP6.78□□□□□ -1.32
SF3B1-206ENST00000462613 COL19A1Q14993 1142 aa6.78□□□□□ -1.32
SF3B1-206ENST00000462613 IQCB1Q15051 598 aa6.78□□□□□ -1.32
SF3B1-206ENST00000462613 SYCP1Q15431 976 aa6.78□□□□□ -1.32
SF3B1-206ENST00000462613 CLUL1Q15846 466 aa6.78□□□□□ -1.32
SF3B1-206ENST00000462613 ARHGAP44Q17R89 818 aa6.78□□□□□ -1.32
SF3B1-206ENST00000462613 ZNF394Q53GI3 561 aa6.78□□□□□ -1.32
SF3B1-206ENST00000462613 SGO2Q562F6 1265 aa6.78□□□□□ -1.32
SF3B1-206ENST00000462613 MIIPQ5JXC2 388 aa6.78□□□□□ -1.32
SF3B1-206ENST00000462613 PTCRAQ6ISU1 281 aaPredicted RBP6.78□□□□□ -1.32
SF3B1-206ENST00000462613 FAM171BQ6P995 826 aa6.78□□□□□ -1.32
SF3B1-206ENST00000462613 RRAGAQ7L523 313 aa6.78□□□□□ -1.32
SF3B1-206ENST00000462613 LIMS2Q7Z4I7 341 aa6.78□□□□□ -1.32
SF3B1-206ENST00000462613 GPR149Q86SP6 731 aa6.78□□□□□ -1.32
SF3B1-206ENST00000462613 ACOT1Q86TX2 421 aa6.78□□□□□ -1.32
SF3B1-206ENST00000462613 OSTM1Q86WC4 334 aa6.78□□□□□ -1.32
SF3B1-206ENST00000462613 SCN4BQ8IWT1 228 aa6.78□□□□□ -1.32
SF3B1-206ENST00000462613 CRYBG2Q8N1P7 616 aa6.78□□□□□ -1.32
SF3B1-206ENST00000462613 ATAD1Q8NBU5 361 aa6.78□□□□□ -1.32
SF3B1-206ENST00000462613 SMRP1Q8NCR6 262 aa6.78□□□□□ -1.32
SF3B1-206ENST00000462613 RNF214Q8ND24 703 aa6.78□□□□□ -1.32
SF3B1-206ENST00000462613 VN1R2Q8NFZ6 395 aa6.78□□□□□ -1.32
SF3B1-206ENST00000462613 MYLPFQ96A32 169 aa6.78□□□□□ -1.32
SF3B1-206ENST00000462613 ACSF2Q96CM8 615 aaPredicted RBP6.78□□□□□ -1.32
SF3B1-206ENST00000462613 IQCDQ96DY2 449 aa6.78□□□□□ -1.32
SF3B1-206ENST00000462613 CYFIP2Q96F07 1278 aa6.78□□□□□ -1.32
SF3B1-206ENST00000462613 PCED1BQ96HM7 432 aa6.78□□□□□ -1.32
SF3B1-206ENST00000462613 APOL5Q9BWW9 433 aa6.78□□□□□ -1.32
SF3B1-206ENST00000462613 LSM14BQ9BX40 385 aaKnown RBP6.78□□□□□ -1.32
SF3B1-206ENST00000462613 RHOBTB2Q9BYZ6 727 aa6.78□□□□□ -1.32
SF3B1-206ENST00000462613 PDCL3Q9H2J4 239 aa6.78□□□□□ -1.32
SF3B1-206ENST00000462613 ADAM7Q9H2U9 754 aa6.78□□□□□ -1.32
SF3B1-206ENST00000462613 APOBEC3GQ9HC16 384 aaKnown RBP6.78□□□□□ -1.32
SF3B1-206ENST00000462613 DMAP1Q9NPF5 467 aaPredicted RBP6.78□□□□□ -1.32
SF3B1-206ENST00000462613 PLCB1Q9NQ66 1216 aa6.78□□□□□ -1.32
SF3B1-206ENST00000462613 ASAH2Q9NR71 780 aa6.78□□□□□ -1.32
SF3B1-206ENST00000462613 ZMYM5Q9UJ78 669 aa6.78□□□□□ -1.32
SF3B1-206ENST00000462613 NR2E1Q9Y466 385 aa6.78□□□□□ -1.32
SF3B1-206ENST00000462613 YIPF1Q9Y548 306 aa6.78□□□□□ -1.32
SF3B1-206ENST00000462613 CEP83Q9Y592 693 aa6.78□□□□□ -1.32
SF3B1-206ENST00000462613 MYBPHLA2RUH7 354 aa6.77□□□□□ -1.33
SF3B1-206ENST00000462613 CCL16O15467 120 aa6.77□□□□□ -1.33
SF3B1-206ENST00000462613 MBTPS2O43462 519 aa6.77□□□□□ -1.33
SF3B1-206ENST00000462613 LRRN2O75325 713 aa6.77□□□□□ -1.33
SF3B1-206ENST00000462613 RFPL2O75678 378 aa6.77□□□□□ -1.33
SF3B1-206ENST00000462613 AP1G2O75843 785 aa6.77□□□□□ -1.33
SF3B1-206ENST00000462613 RTN3O95197 1032 aaPredicted RBP6.77□□□□□ -1.33
SF3B1-206ENST00000462613 HAPLN1P10915 354 aaPredicted RBP6.77□□□□□ -1.33
SF3B1-206ENST00000462613 UCHL3P15374 230 aa6.77□□□□□ -1.33
SF3B1-206ENST00000462613 BDNFP23560 247 aa6.77□□□□□ -1.33
SF3B1-206ENST00000462613 LTBRP36941 435 aa6.77□□□□□ -1.33
SF3B1-206ENST00000462613 SNX16P57768 344 aa6.77□□□□□ -1.33
SF3B1-206ENST00000462613 FANCCQ00597 558 aa6.77□□□□□ -1.33
SF3B1-206ENST00000462613 PABPC1LQ4VXU2 614 aaKnown RBP6.77□□□□□ -1.33
SF3B1-206ENST00000462613 ARHGAP15Q53QZ3 475 aa6.77□□□□□ -1.33
SF3B1-206ENST00000462613 KLHDC7AQ5VTJ3 777 aa6.77□□□□□ -1.33
SF3B1-206ENST00000462613 PHLDB3Q6NSJ2 640 aa6.77□□□□□ -1.33
SF3B1-206ENST00000462613 SYCE2Q6PIF2 218 aa6.77□□□□□ -1.33
SF3B1-206ENST00000462613 RSPO2Q6UXX9 243 aaPredicted RBP6.77□□□□□ -1.33
SF3B1-206ENST00000462613 DENND5BQ6ZUT9 1274 aa6.77□□□□□ -1.33
SF3B1-206ENST00000462613 PDZD4Q76G19 769 aaPredicted RBP6.77□□□□□ -1.33
SF3B1-206ENST00000462613 RBBP8NLQ8NC74 664 aaPredicted RBP6.77□□□□□ -1.33
SF3B1-206ENST00000462613 ZNF397Q8NF99 534 aaPredicted RBP6.77□□□□□ -1.33
SF3B1-206ENST00000462613 LMO3Q8TAP4 145 aa6.77□□□□□ -1.33
SF3B1-206ENST00000462613 MSLNLQ96KJ4 702 aa6.77□□□□□ -1.33
SF3B1-206ENST00000462613 NOX5Q96PH1 765 aa6.77□□□□□ -1.33
SF3B1-206ENST00000462613 SLITRK1Q96PX8 696 aa6.77□□□□□ -1.33
SF3B1-206ENST00000462613 ERGIC2Q96RQ1 377 aa6.77□□□□□ -1.33
SF3B1-206ENST00000462613 TMEM209Q96SK2 561 aa6.77□□□□□ -1.33
SF3B1-206ENST00000462613 HNRNPABQ99729 332 aaKnown RBP6.77□□□□□ -1.33
SF3B1-206ENST00000462613 ARID3AQ99856 593 aa6.77□□□□□ -1.33
SF3B1-206ENST00000462613 RTP3Q9BQQ7 232 aa6.77□□□□□ -1.33
SF3B1-206ENST00000462613 CORO1BQ9BR76 489 aa6.77□□□□□ -1.33
SF3B1-206ENST00000462613 NUP58Q9BVL2 599 aa6.77□□□□□ -1.33
SF3B1-206ENST00000462613 SDCBP2Q9H190 292 aa6.77□□□□□ -1.33
SF3B1-206ENST00000462613 DPEP3Q9H4B8 488 aa6.77□□□□□ -1.33
SF3B1-206ENST00000462613 FBXO44Q9H4M3 255 aa6.77□□□□□ -1.33
SF3B1-206ENST00000462613 CRTAC1Q9NQ79 661 aa6.77□□□□□ -1.33
SF3B1-206ENST00000462613 KRT82Q9NSB4 513 aa6.77□□□□□ -1.33
SF3B1-206ENST00000462613 FAM207AQ9NSI2 230 aaPredicted RBP6.77□□□□□ -1.33
SF3B1-206ENST00000462613 FAM49BQ9NUQ9 324 aa6.77□□□□□ -1.33
SF3B1-206ENST00000462613 CLEC1BQ9P126 229 aa6.77□□□□□ -1.33
SF3B1-206ENST00000462613 DNAJC12Q9UKB3 198 aa6.77□□□□□ -1.33
SF3B1-206ENST00000462613 SLC27A5Q9Y2P5 690 aa6.77□□□□□ -1.33
SF3B1-206ENST00000462613 ZFP37Q9Y6Q3 630 aaPredicted RBP6.77□□□□□ -1.33
SF3B1-206ENST00000462613 NOTCH4Q99466 2003 aa6.76□□□□□ -1.33
SF3B1-206ENST00000462613 A0A1B0GTH6 734 aa6.76□□□□□ -1.33
SF3B1-206ENST00000462613 A0A1W2PQC6 194 aa6.76□□□□□ -1.33
SF3B1-206ENST00000462613 THAP12O43422 761 aa6.76□□□□□ -1.33
SF3B1-206ENST00000462613 ATP2C2O75185 946 aa6.76□□□□□ -1.33
SF3B1-206ENST00000462613 SEC24AO95486 1093 aa6.76□□□□□ -1.33
SF3B1-206ENST00000462613 SETSIPP0DME0 302 aa6.76□□□□□ -1.33
SF3B1-206ENST00000462613 MYL4P12829 197 aa6.76□□□□□ -1.33
SF3B1-206ENST00000462613 CCDC130P13994 396 aa6.76□□□□□ -1.33
SF3B1-206ENST00000462613 FSHRP23945 695 aa6.76□□□□□ -1.33
SF3B1-206ENST00000462613 CYP2F1P24903 491 aa6.76□□□□□ -1.33
SF3B1-206ENST00000462613 ADORA2BP29275 332 aa6.76□□□□□ -1.33
SF3B1-206ENST00000462613 CDC25CP30307 473 aa6.76□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms