RNA–Protein interactions for RNA: ENST00000454428.5

UBE2D4-209, Transcript of ubiquitin conjugating enzyme E2 D4 (putative), humanhuman

TSL 3

Gene UBE2D4, Length 288 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4-209ENST00000454428 DHPSP49366 369 aaPredicted RBP18.56■□□□□ 0.56
UBE2D4-209ENST00000454428 SLC12A3P55017 1021 aa18.56■□□□□ 0.56
UBE2D4-209ENST00000454428 ANAPC15P60006 121 aa18.56■□□□□ 0.56
UBE2D4-209ENST00000454428 FAM160A1Q05DH4 1040 aa18.56■□□□□ 0.56
UBE2D4-209ENST00000454428 SMARCB1Q12824 385 aa18.56■□□□□ 0.56
UBE2D4-209ENST00000454428 TRIM61Q5EBN2 209 aa18.56■□□□□ 0.56
UBE2D4-209ENST00000454428 KRT79Q5XKE5 535 aa18.56■□□□□ 0.56
UBE2D4-209ENST00000454428 FRMD1Q8N878 549 aa18.56■□□□□ 0.56
UBE2D4-209ENST00000454428 MRPS31Q92665 395 aaKnown RBP18.56■□□□□ 0.56
UBE2D4-209ENST00000454428 PNMA5Q96PV4 448 aa18.56■□□□□ 0.56
UBE2D4-209ENST00000454428 FNBP1Q96RU3 617 aa18.56■□□□□ 0.56
UBE2D4-209ENST00000454428 DSEQ9UL01 958 aa18.56■□□□□ 0.56
UBE2D4-209ENST00000454428 MAGED2Q9UNF1 606 aaPredicted RBP18.56■□□□□ 0.56
UBE2D4-209ENST00000454428 PCDHB6Q9Y5E3 794 aa18.56■□□□□ 0.56
UBE2D4-209ENST00000454428 HELZP42694 1942 aaKnown RBP18.56■□□□□ 0.56
UBE2D4-209ENST00000454428 BPTFQ12830 3046 aa18.55■□□□□ 0.56
UBE2D4-209ENST00000454428 A0A0B4J269 797 aa18.55■□□□□ 0.56
UBE2D4-209ENST00000454428 FAM221BA6H8Z2 402 aa18.55■□□□□ 0.56
UBE2D4-209ENST00000454428 PIGRP01833 764 aa18.55■□□□□ 0.56
UBE2D4-209ENST00000454428 PTGER3P43115 390 aa18.55■□□□□ 0.56
UBE2D4-209ENST00000454428 MAPK8P45983 427 aa18.55■□□□□ 0.56
UBE2D4-209ENST00000454428 SEC13P55735 322 aa18.55■□□□□ 0.56
UBE2D4-209ENST00000454428 SEMA3BQ13214 749 aa18.55■□□□□ 0.56
UBE2D4-209ENST00000454428 CRY1Q16526 586 aa18.55■□□□□ 0.56
UBE2D4-209ENST00000454428 KYAT1Q16773 422 aa18.55■□□□□ 0.56
UBE2D4-209ENST00000454428 C2orf27AQ580R0 203 aa18.55■□□□□ 0.56
UBE2D4-209ENST00000454428 ARSHQ5FYA8 562 aa18.55■□□□□ 0.56
UBE2D4-209ENST00000454428 TMEM92Q6UXU6 159 aa18.55■□□□□ 0.56
UBE2D4-209ENST00000454428 SYT2Q8N9I0 419 aaPredicted RBP18.55■□□□□ 0.56
UBE2D4-209ENST00000454428 ATP2A3Q93084 1043 aa18.55■□□□□ 0.56
UBE2D4-209ENST00000454428 EXOC4Q96A65 974 aa18.55■□□□□ 0.56
UBE2D4-209ENST00000454428 FAM212AQ96EL1 285 aa18.55■□□□□ 0.56
UBE2D4-209ENST00000454428 BICD1Q96G01 975 aa18.55■□□□□ 0.56
UBE2D4-209ENST00000454428 C8orf76Q96K31 380 aa18.55■□□□□ 0.56
UBE2D4-209ENST00000454428 PYM1Q9BRP8 204 aaKnown RBP18.55■□□□□ 0.56
UBE2D4-209ENST00000454428 PI4K2AQ9BTU6 479 aa18.55■□□□□ 0.56
UBE2D4-209ENST00000454428 CCSER1Q9C0I3 900 aa18.55■□□□□ 0.56
UBE2D4-209ENST00000454428 LINC00597Q9H2U6 94 aa18.55■□□□□ 0.56
UBE2D4-209ENST00000454428 GCNT4Q9P109 453 aa18.55■□□□□ 0.56
UBE2D4-209ENST00000454428 MBD1Q9UIS9 605 aaPredicted RBP18.55■□□□□ 0.56
UBE2D4-209ENST00000454428 KCNG1Q9UIX4 513 aa18.55■□□□□ 0.56
UBE2D4-209ENST00000454428 MMP17Q9ULZ9 603 aa18.55■□□□□ 0.56
UBE2D4-209ENST00000454428 PCDH15Q96QU1 1955 aa18.54■□□□□ 0.56
UBE2D4-209ENST00000454428 NOL4O94818 638 aa18.54■□□□□ 0.56
UBE2D4-209ENST00000454428 ENGP17813 658 aa18.54■□□□□ 0.56
UBE2D4-209ENST00000454428 LIG4P49917 911 aa18.54■□□□□ 0.56
UBE2D4-209ENST00000454428 FAM193AP78312 1265 aa18.54■□□□□ 0.56
UBE2D4-209ENST00000454428 TMEM132DQ14C87 1099 aa18.54■□□□□ 0.56
UBE2D4-209ENST00000454428 ZC2HC1CQ53FD0 456 aaPredicted RBP18.54■□□□□ 0.56
UBE2D4-209ENST00000454428 HYIQ5T013 277 aa18.54■□□□□ 0.56
UBE2D4-209ENST00000454428 SFTPA1Q8IWL2 248 aa18.54■□□□□ 0.56
UBE2D4-209ENST00000454428 CD302Q8IX05 232 aa18.54■□□□□ 0.56
UBE2D4-209ENST00000454428 EFCAB13Q8IY85 973 aa18.54■□□□□ 0.56
UBE2D4-209ENST00000454428 THEM5Q8N1Q8 247 aa18.54■□□□□ 0.56
UBE2D4-209ENST00000454428 CCDC33Q8N5R6 958 aa18.54■□□□□ 0.56
UBE2D4-209ENST00000454428 RLN3Q8WXF3 142 aa18.54■□□□□ 0.56
UBE2D4-209ENST00000454428 DERAQ9Y315 318 aa18.54■□□□□ 0.56
UBE2D4-209ENST00000454428 PCDHB5Q9Y5E4 795 aa18.54■□□□□ 0.56
UBE2D4-209ENST00000454428 UPK3BL1B0FP48 263 aa18.53■□□□□ 0.56
UBE2D4-209ENST00000454428 UPK3BL2E5RIL1 263 aa18.53■□□□□ 0.56
UBE2D4-209ENST00000454428 TNFRSF10BO14763 440 aa18.53■□□□□ 0.56
UBE2D4-209ENST00000454428 HNRNPDLO14979 420 aaKnown RBP18.53■□□□□ 0.56
UBE2D4-209ENST00000454428 CSH1P0DML2 217 aa18.53■□□□□ 0.56
UBE2D4-209ENST00000454428 CSH2P0DML3 217 aa18.53■□□□□ 0.56
UBE2D4-209ENST00000454428 P2RY2P41231 377 aa18.53■□□□□ 0.56
UBE2D4-209ENST00000454428 IFNAR2P48551 515 aa18.53■□□□□ 0.56
UBE2D4-209ENST00000454428 SIM1P81133 766 aaPredicted RBP18.53■□□□□ 0.56
UBE2D4-209ENST00000454428 ZXDBP98169 803 aa18.53■□□□□ 0.56
UBE2D4-209ENST00000454428 MESP2Q0VG99 397 aa18.53■□□□□ 0.56
UBE2D4-209ENST00000454428 LMAN2Q12907 356 aa18.53■□□□□ 0.56
UBE2D4-209ENST00000454428 DDR2Q16832 855 aa18.53■□□□□ 0.56
UBE2D4-209ENST00000454428 SOWAHCQ53LP3 525 aaPredicted RBP18.53■□□□□ 0.56
UBE2D4-209ENST00000454428 ARMCX6Q7L4S7 300 aa18.53■□□□□ 0.56
UBE2D4-209ENST00000454428 METTL23Q86XA0 190 aa18.53■□□□□ 0.56
UBE2D4-209ENST00000454428 PROSER1Q86XN7 944 aa18.53■□□□□ 0.56
UBE2D4-209ENST00000454428 FBXO18Q8NFZ0 1043 aa18.53■□□□□ 0.56
UBE2D4-209ENST00000454428 LRRC15Q8TF66 581 aa18.53■□□□□ 0.56
UBE2D4-209ENST00000454428 TRMT2BQ96GJ1 504 aaKnown RBP18.53■□□□□ 0.56
UBE2D4-209ENST00000454428 MYRFLQ96LU7 910 aa18.53■□□□□ 0.56
UBE2D4-209ENST00000454428 RAB34Q9BZG1 259 aa18.53■□□□□ 0.56
UBE2D4-209ENST00000454428 SLC32A1Q9H598 525 aa18.53■□□□□ 0.56
UBE2D4-209ENST00000454428 TMEM206Q9H813 350 aa18.53■□□□□ 0.56
UBE2D4-209ENST00000454428 TRPC7Q9HCX4 862 aa18.53■□□□□ 0.56
UBE2D4-209ENST00000454428 FSCN3Q9NQT6 498 aa18.53■□□□□ 0.56
UBE2D4-209ENST00000454428 GPSM3Q9Y4H4 160 aa18.53■□□□□ 0.56
UBE2D4-209ENST00000454428 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa18.52■□□□□ 0.56
UBE2D4-209ENST00000454428 PRPF40AO75400 957 aaKnown RBP18.52■□□□□ 0.56
UBE2D4-209ENST00000454428 TAF6P49848 677 aa18.52■□□□□ 0.56
UBE2D4-209ENST00000454428 CCDC142Q17RM4 750 aa18.52■□□□□ 0.56
UBE2D4-209ENST00000454428 PEAR1Q5VY43 1037 aaPredicted RBP18.52■□□□□ 0.56
UBE2D4-209ENST00000454428 SLC23A3Q6PIS1 610 aa18.52■□□□□ 0.56
UBE2D4-209ENST00000454428 SYT12Q8IV01 421 aa18.52■□□□□ 0.56
UBE2D4-209ENST00000454428 TMEFF1Q8IYR6 380 aa18.52■□□□□ 0.56
UBE2D4-209ENST00000454428 DCP1BQ8IZD4 617 aaKnown RBP18.52■□□□□ 0.56
UBE2D4-209ENST00000454428 TTC16Q8NEE8 873 aa18.52■□□□□ 0.56
UBE2D4-209ENST00000454428 SH3RF2Q8TEC5 729 aa18.52■□□□□ 0.56
UBE2D4-209ENST00000454428 PLIN2Q99541 437 aa18.52■□□□□ 0.56
UBE2D4-209ENST00000454428 PKMYT1Q99640 499 aa18.52■□□□□ 0.56
UBE2D4-209ENST00000454428 MSTO1Q9BUK6 570 aa18.52■□□□□ 0.56
UBE2D4-209ENST00000454428 NUSAP1Q9BXS6 441 aaKnown RBP18.52■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms