RNA–Protein interactions for RNA: ENST00000439717.2

HSPG2-206, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 637 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-206ENST00000439717 LAMP2P13473 410 aa12.58□□□□□ -0.4
HSPG2-206ENST00000439717 SP100P23497 879 aaPredicted RBP12.58□□□□□ -0.4
HSPG2-206ENST00000439717 TBXAS1P24557 533 aaPredicted RBP12.58□□□□□ -0.4
HSPG2-206ENST00000439717 EEF1GP26641 437 aaKnown RBP12.58□□□□□ -0.4
HSPG2-206ENST00000439717 YWHAEP62258 255 aaKnown RBP12.58□□□□□ -0.4
HSPG2-206ENST00000439717 CUL2Q13617 745 aa12.58□□□□□ -0.4
HSPG2-206ENST00000439717 TAF12Q16514 161 aa12.58□□□□□ -0.4
HSPG2-206ENST00000439717 MAN2A1Q16706 1144 aa12.58□□□□□ -0.4
HSPG2-206ENST00000439717 TMC8Q8IU68 726 aa12.58□□□□□ -0.4
HSPG2-206ENST00000439717 RNF135Q8IUD6 432 aa12.58□□□□□ -0.4
HSPG2-206ENST00000439717 EHBP1Q8NDI1 1231 aa12.58□□□□□ -0.4
HSPG2-206ENST00000439717 LMO3Q8TAP4 145 aa12.58□□□□□ -0.4
HSPG2-206ENST00000439717 ITFG1Q8TB96 612 aa12.58□□□□□ -0.4
HSPG2-206ENST00000439717 FGF13Q92913 245 aa12.58□□□□□ -0.4
HSPG2-206ENST00000439717 TATDN2Q93075 761 aa12.58□□□□□ -0.4
HSPG2-206ENST00000439717 NXPE3Q969Y0 559 aa12.58□□□□□ -0.4
HSPG2-206ENST00000439717 SPATA17Q96L03 361 aa12.58□□□□□ -0.4
HSPG2-206ENST00000439717 NT5C1BQ96P26 610 aa12.58□□□□□ -0.4
HSPG2-206ENST00000439717 MYADMQ96S97 322 aa12.58□□□□□ -0.4
HSPG2-206ENST00000439717 NT5C1AQ9BXI3 368 aa12.58□□□□□ -0.4
HSPG2-206ENST00000439717 LRRC3Q9BY71 257 aa12.58□□□□□ -0.4
HSPG2-206ENST00000439717 NAT10Q9H0A0 1025 aaKnown RBP12.58□□□□□ -0.4
HSPG2-206ENST00000439717 CISHQ9NSE2 258 aa12.58□□□□□ -0.4
HSPG2-206ENST00000439717 GDE1Q9NZC3 331 aa12.58□□□□□ -0.4
HSPG2-206ENST00000439717 NFE2L3Q9Y4A8 694 aa12.58□□□□□ -0.4
HSPG2-206ENST00000439717 GTPBP10A4D1E9 387 aaKnown RBP12.57□□□□□ -0.4
HSPG2-206ENST00000439717 KCNJ18B7U540 433 aa12.57□□□□□ -0.4
HSPG2-206ENST00000439717 TRIM66O15016 1216 aa12.57□□□□□ -0.4
HSPG2-206ENST00000439717 CSH1P0DML2 217 aa12.57□□□□□ -0.4
HSPG2-206ENST00000439717 CSH2P0DML3 217 aa12.57□□□□□ -0.4
HSPG2-206ENST00000439717 MYL4P12829 197 aa12.57□□□□□ -0.4
HSPG2-206ENST00000439717 CD58P19256 250 aa12.57□□□□□ -0.4
HSPG2-206ENST00000439717 BDNFP23560 247 aa12.57□□□□□ -0.4
HSPG2-206ENST00000439717 GRIK1P39086 918 aa12.57□□□□□ -0.4
HSPG2-206ENST00000439717 CDR1P51861 262 aa12.57□□□□□ -0.4
HSPG2-206ENST00000439717 MYL5Q02045 173 aa12.57□□□□□ -0.4
HSPG2-206ENST00000439717 KCNJ12Q14500 433 aa12.57□□□□□ -0.4
HSPG2-206ENST00000439717 DDR2Q16832 855 aa12.57□□□□□ -0.4
HSPG2-206ENST00000439717 CCDC142Q17RM4 750 aa12.57□□□□□ -0.4
HSPG2-206ENST00000439717 SLC5A9Q2M3M2 681 aa12.57□□□□□ -0.4
HSPG2-206ENST00000439717 C11orf57Q6ZUT1 292 aaPredicted RBP12.57□□□□□ -0.4
HSPG2-206ENST00000439717 ACOT1Q86TX2 421 aa12.57□□□□□ -0.4
HSPG2-206ENST00000439717 SCN4BQ8IWT1 228 aa12.57□□□□□ -0.4
HSPG2-206ENST00000439717 HS6ST3Q8IZP7 471 aa12.57□□□□□ -0.4
HSPG2-206ENST00000439717 WHAMMQ8TF30 809 aa12.57□□□□□ -0.4
HSPG2-206ENST00000439717 GIPC2Q8TF65 315 aa12.57□□□□□ -0.4
HSPG2-206ENST00000439717 C8orf48Q96LL4 319 aa12.57□□□□□ -0.4
HSPG2-206ENST00000439717 LPIN3Q9BQK8 851 aa12.57□□□□□ -0.4
HSPG2-206ENST00000439717 TUBGCP2Q9BSJ2 902 aa12.57□□□□□ -0.4
HSPG2-206ENST00000439717 B3GNT5Q9BYG0 378 aa12.57□□□□□ -0.4
HSPG2-206ENST00000439717 GPR88Q9GZN0 384 aa12.57□□□□□ -0.4
HSPG2-206ENST00000439717 SAMSN1Q9NSI8 373 aaKnown RBP12.57□□□□□ -0.4
HSPG2-206ENST00000439717 EHD2Q9NZN4 543 aa12.57□□□□□ -0.4
HSPG2-206ENST00000439717 IGSF9Q9P2J2 1179 aa12.57□□□□□ -0.4
HSPG2-206ENST00000439717 HMGXB4Q9UGU5 601 aa12.57□□□□□ -0.4
HSPG2-206ENST00000439717 NOL4O94818 638 aa12.56□□□□□ -0.4
HSPG2-206ENST00000439717 ALADP13716 330 aa12.56□□□□□ -0.4
HSPG2-206ENST00000439717 ANXA13P27216 316 aa12.56□□□□□ -0.4
HSPG2-206ENST00000439717 CDC25CP30307 473 aa12.56□□□□□ -0.4
HSPG2-206ENST00000439717 CCR2P41597 374 aa12.56□□□□□ -0.4
HSPG2-206ENST00000439717 GPR15P49685 360 aa12.56□□□□□ -0.4
HSPG2-206ENST00000439717 GCNT1Q02742 428 aa12.56□□□□□ -0.4
HSPG2-206ENST00000439717 LRMPQ12912 555 aa12.56□□□□□ -0.4
HSPG2-206ENST00000439717 VWA3BQ502W6 1294 aa12.56□□□□□ -0.4
HSPG2-206ENST00000439717 TCP11X2Q5H9J9 407 aa12.56□□□□□ -0.4
HSPG2-206ENST00000439717 CDKAL1Q5VV42 579 aa12.56□□□□□ -0.4
HSPG2-206ENST00000439717 GBP6Q6ZN66 633 aa12.56□□□□□ -0.4
HSPG2-206ENST00000439717 MTSS1LQ765P7 747 aa12.56□□□□□ -0.4
HSPG2-206ENST00000439717 NPAS3Q8IXF0 933 aa12.56□□□□□ -0.4
HSPG2-206ENST00000439717 JAKMIP2Q96AA8 810 aa12.56□□□□□ -0.4
HSPG2-206ENST00000439717 TCEAL4Q96EI5 215 aa12.56□□□□□ -0.4
HSPG2-206ENST00000439717 TRMT2BQ96GJ1 504 aaKnown RBP12.56□□□□□ -0.4
HSPG2-206ENST00000439717 SMARCD1Q96GM5 515 aa12.56□□□□□ -0.4
HSPG2-206ENST00000439717 TMEM176AQ96HP8 235 aa12.56□□□□□ -0.4
HSPG2-206ENST00000439717 FAM81BQ96LP2 452 aa12.56□□□□□ -0.4
HSPG2-206ENST00000439717 MYRFLQ96LU7 910 aa12.56□□□□□ -0.4
HSPG2-206ENST00000439717 GCNAQ96QF7 691 aa12.56□□□□□ -0.4
HSPG2-206ENST00000439717 TWNKQ96RR1 684 aa12.56□□□□□ -0.4
HSPG2-206ENST00000439717 ARID3AQ99856 593 aa12.56□□□□□ -0.4
HSPG2-206ENST00000439717 BPIFA3Q9BQP9 254 aa12.56□□□□□ -0.4
HSPG2-206ENST00000439717 MED10Q9BTT4 135 aa12.56□□□□□ -0.4
HSPG2-206ENST00000439717 ZNF518BQ9C0D4 1074 aa12.56□□□□□ -0.4
HSPG2-206ENST00000439717 INTS2Q9H0H0 1204 aaKnown RBP12.56□□□□□ -0.4
HSPG2-206ENST00000439717 GCNT4Q9P109 453 aa12.56□□□□□ -0.4
HSPG2-206ENST00000439717 UXTQ9UBK9 157 aaPredicted RBP12.56□□□□□ -0.4
HSPG2-206ENST00000439717 LIMD1Q9UGP4 676 aa12.56□□□□□ -0.4
HSPG2-206ENST00000439717 ZMYM5Q9UJ78 669 aa12.56□□□□□ -0.4
HSPG2-206ENST00000439717 SLC38A8A6NNN8 435 aa12.55□□□□□ -0.4
HSPG2-206ENST00000439717 SOBPA7XYQ1 873 aa12.55□□□□□ -0.4
HSPG2-206ENST00000439717 ANHXE9PGG2 379 aa12.55□□□□□ -0.4
HSPG2-206ENST00000439717 CLDN5O00501 218 aa12.55□□□□□ -0.4
HSPG2-206ENST00000439717 DCXO43602 365 aa12.55□□□□□ -0.4
HSPG2-206ENST00000439717 MOSPD3O75425 235 aa12.55□□□□□ -0.4
HSPG2-206ENST00000439717 HMGA1P17096 107 aaKnown RBP12.55□□□□□ -0.4
HSPG2-206ENST00000439717 CEBPBP17676 345 aa12.55□□□□□ -0.4
HSPG2-206ENST00000439717 GABRR2P28476 465 aa12.55□□□□□ -0.4
HSPG2-206ENST00000439717 ORC1Q13415 861 aa12.55□□□□□ -0.4
HSPG2-206ENST00000439717 PTPN21Q16825 1174 aa12.55□□□□□ -0.4
HSPG2-206ENST00000439717 EXOC3L4Q17RC7 722 aa12.55□□□□□ -0.4
HSPG2-206ENST00000439717 ANO6Q4KMQ2 910 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 72.2 ms