RNA–Protein interactions for RNA: ENST00000438419.6

TRAPPC13-204, Transcript of trafficking protein particle complex 13, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene TRAPPC13, Length 1,437 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-204ENST00000438419 RGS17Q9UGC6 210 aaPredicted RBP4.5□□□□□ -1.69
TRAPPC13-204ENST00000438419 PACSIN3Q9UKS6 424 aa4.5□□□□□ -1.69
TRAPPC13-204ENST00000438419 MAST3O60307 1309 aa4.49□□□□□ -1.69
TRAPPC13-204ENST00000438419 DCLK1O15075 740 aa4.49□□□□□ -1.69
TRAPPC13-204ENST00000438419 HKR1P10072 659 aa4.49□□□□□ -1.69
TRAPPC13-204ENST00000438419 SRGNP10124 158 aa4.49□□□□□ -1.69
TRAPPC13-204ENST00000438419 CD6P30203 668 aa4.49□□□□□ -1.69
TRAPPC13-204ENST00000438419 PPIFP30405 207 aaKnown RBP4.49□□□□□ -1.69
TRAPPC13-204ENST00000438419 LRPAP1P30533 357 aa4.49□□□□□ -1.69
TRAPPC13-204ENST00000438419 ADRA1BP35368 520 aa4.49□□□□□ -1.69
TRAPPC13-204ENST00000438419 PXNP49023 591 aaPredicted RBP4.49□□□□□ -1.69
TRAPPC13-204ENST00000438419 HDAC1Q13547 482 aaPredicted RBP4.49□□□□□ -1.69
TRAPPC13-204ENST00000438419 MGAT5BQ3V5L5 792 aa4.49□□□□□ -1.69
TRAPPC13-204ENST00000438419 C3orf38Q5JPI3 329 aa4.49□□□□□ -1.69
TRAPPC13-204ENST00000438419 TMEM108Q6UXF1 575 aa4.49□□□□□ -1.69
TRAPPC13-204ENST00000438419 SESTD1Q86VW0 696 aa4.49□□□□□ -1.69
TRAPPC13-204ENST00000438419 GAS2L3Q86XJ1 694 aa4.49□□□□□ -1.69
TRAPPC13-204ENST00000438419 SSH3Q8TE77 659 aa4.49□□□□□ -1.69
TRAPPC13-204ENST00000438419 MESP1Q9BRJ9 268 aa4.49□□□□□ -1.69
TRAPPC13-204ENST00000438419 POLR3GLQ9BT43 218 aa4.49□□□□□ -1.69
TRAPPC13-204ENST00000438419 MS4A7Q9GZW8 240 aaPredicted RBP4.49□□□□□ -1.69
TRAPPC13-204ENST00000438419 TOR3AQ9H497 397 aa4.49□□□□□ -1.69
TRAPPC13-204ENST00000438419 ALG13Q9NP73 1137 aaKnown RBP4.49□□□□□ -1.69
TRAPPC13-204ENST00000438419 CASS4Q9NQ75 786 aa4.49□□□□□ -1.69
TRAPPC13-204ENST00000438419 COL20A1Q9P218 1284 aa4.49□□□□□ -1.69
TRAPPC13-204ENST00000438419 CORO2BQ9UQ03 480 aa4.49□□□□□ -1.69
TRAPPC13-204ENST00000438419 WDR33Q9C0J8 1336 aaKnown RBP4.49□□□□□ -1.69
TRAPPC13-204ENST00000438419 PYCARD-AS1I3L0S3 204 aa4.48□□□□□ -1.69
TRAPPC13-204ENST00000438419 PROM1O43490 865 aa4.48□□□□□ -1.69
TRAPPC13-204ENST00000438419 IL18RAPO95256 599 aa4.48□□□□□ -1.69
TRAPPC13-204ENST00000438419 PIK3CBP42338 1070 aa4.48□□□□□ -1.69
TRAPPC13-204ENST00000438419 ZNF134P52741 427 aa4.48□□□□□ -1.69
TRAPPC13-204ENST00000438419 LILRA4P59901 499 aa4.48□□□□□ -1.69
TRAPPC13-204ENST00000438419 RPS16P62249 146 aaKnown RBP4.48□□□□□ -1.69
TRAPPC13-204ENST00000438419 ITIH3Q06033 890 aa4.48□□□□□ -1.69
TRAPPC13-204ENST00000438419 DAG1Q14118 895 aa4.48□□□□□ -1.69
TRAPPC13-204ENST00000438419 UBE4AQ14139 1066 aa4.48□□□□□ -1.69
TRAPPC13-204ENST00000438419 RBM20Q5T481 1227 aaKnown RBP4.48□□□□□ -1.69
TRAPPC13-204ENST00000438419 DCAF12L1Q5VU92 463 aa4.48□□□□□ -1.69
TRAPPC13-204ENST00000438419 SLC44A3Q8N4M1 653 aa4.48□□□□□ -1.69
TRAPPC13-204ENST00000438419 B3GALNT2Q8NCR0 500 aa4.48□□□□□ -1.69
TRAPPC13-204ENST00000438419 OR56A3Q8NH54 315 aa4.48□□□□□ -1.69
TRAPPC13-204ENST00000438419 IPCEF1Q8WWN9 437 aaPredicted RBP4.48□□□□□ -1.69
TRAPPC13-204ENST00000438419 SPSB4Q96A44 273 aa4.48□□□□□ -1.69
TRAPPC13-204ENST00000438419 PTDSS2Q9BVG9 487 aa4.48□□□□□ -1.69
TRAPPC13-204ENST00000438419 ZNF700Q9H0M5 742 aa4.48□□□□□ -1.69
TRAPPC13-204ENST00000438419 SERHLQ9NQF3 203 aa4.48□□□□□ -1.69
TRAPPC13-204ENST00000438419 KCTD5Q9NXV2 234 aa4.48□□□□□ -1.69
TRAPPC13-204ENST00000438419 TMEM233B4DJY2 109 aa4.47□□□□□ -1.69
TRAPPC13-204ENST00000438419 ESRRBO95718 433 aa4.47□□□□□ -1.69
TRAPPC13-204ENST00000438419 PPP3CBP16298 524 aa4.47□□□□□ -1.69
TRAPPC13-204ENST00000438419 TYRP1P17643 537 aa4.47□□□□□ -1.69
TRAPPC13-204ENST00000438419 CASP5P51878 434 aa4.47□□□□□ -1.69
TRAPPC13-204ENST00000438419 HNRNPMP52272 730 aaKnown RBP eCLIP4.47□□□□□ -1.69
TRAPPC13-204ENST00000438419 NXPH1P58417 271 aa4.47□□□□□ -1.69
TRAPPC13-204ENST00000438419 RHBDL3P58872 404 aa4.47□□□□□ -1.69
TRAPPC13-204ENST00000438419 KRT17Q04695 432 aa4.47□□□□□ -1.69
TRAPPC13-204ENST00000438419 BIRC2Q13490 618 aa4.47□□□□□ -1.69
TRAPPC13-204ENST00000438419 SF3B3Q15393 1217 aaKnown RBP4.47□□□□□ -1.69
TRAPPC13-204ENST00000438419 KRTAP15-1Q3LI76 137 aa4.47□□□□□ -1.69
TRAPPC13-204ENST00000438419 PLA1AQ53H76 456 aa4.47□□□□□ -1.69
TRAPPC13-204ENST00000438419 ICE2Q659A1 982 aa4.47□□□□□ -1.69
TRAPPC13-204ENST00000438419 IL31Q6EBC2 164 aa4.47□□□□□ -1.69
TRAPPC13-204ENST00000438419 VWA1Q6PCB0 445 aa4.47□□□□□ -1.69
TRAPPC13-204ENST00000438419 Q6ZNX1 250 aa4.47□□□□□ -1.69
TRAPPC13-204ENST00000438419 FAM109AQ8N4B1 249 aa4.47□□□□□ -1.69
TRAPPC13-204ENST00000438419 SUPT20HQ8NEM7 779 aa4.47□□□□□ -1.69
TRAPPC13-204ENST00000438419 SLC30A5Q8TAD4 765 aa4.47□□□□□ -1.69
TRAPPC13-204ENST00000438419 RAPGEF4Q8WZA2 1011 aa4.47□□□□□ -1.69
TRAPPC13-204ENST00000438419 FAM136AQ96C01 138 aa4.47□□□□□ -1.69
TRAPPC13-204ENST00000438419 PPP1R9BQ96SB3 815 aa4.47□□□□□ -1.69
TRAPPC13-204ENST00000438419 MPHOSPH6Q99547 160 aaKnown RBP4.47□□□□□ -1.69
TRAPPC13-204ENST00000438419 AIFM2Q9BRQ8 373 aa4.47□□□□□ -1.69
TRAPPC13-204ENST00000438419 BRIP1Q9BX63 1249 aa4.47□□□□□ -1.69
TRAPPC13-204ENST00000438419 NAA15Q9BXJ9 866 aaKnown RBP4.47□□□□□ -1.69
TRAPPC13-204ENST00000438419 CHMP4AQ9BY43 222 aa4.47□□□□□ -1.69
TRAPPC13-204ENST00000438419 CHST12Q9NRB3 414 aa4.47□□□□□ -1.69
TRAPPC13-204ENST00000438419 LOC102723971A0A1B0GUV8 181 aa4.46□□□□□ -1.69
TRAPPC13-204ENST00000438419 CCP110O43303 1012 aa4.46□□□□□ -1.69
TRAPPC13-204ENST00000438419 PEX1O43933 1283 aa4.46□□□□□ -1.69
TRAPPC13-204ENST00000438419 RASSF9O75901 435 aa4.46□□□□□ -1.69
TRAPPC13-204ENST00000438419 INMTO95050 263 aa4.46□□□□□ -1.69
TRAPPC13-204ENST00000438419 MYL3P08590 195 aa4.46□□□□□ -1.69
TRAPPC13-204ENST00000438419 PARP1P09874 1014 aaKnown RBP4.46□□□□□ -1.69
TRAPPC13-204ENST00000438419 PLA2G5P39877 138 aa4.46□□□□□ -1.69
TRAPPC13-204ENST00000438419 TM4SF4P48230 202 aa4.46□□□□□ -1.69
TRAPPC13-204ENST00000438419 PRIM2P49643 509 aa4.46□□□□□ -1.69
TRAPPC13-204ENST00000438419 AK2P54819 239 aa4.46□□□□□ -1.69
TRAPPC13-204ENST00000438419 ZNF543Q08ER8 600 aa4.46□□□□□ -1.69
TRAPPC13-204ENST00000438419 MPP3Q13368 585 aa4.46□□□□□ -1.69
TRAPPC13-204ENST00000438419 BRD3Q15059 726 aa4.46□□□□□ -1.69
TRAPPC13-204ENST00000438419 LONRF1Q17RB8 773 aa4.46□□□□□ -1.69
TRAPPC13-204ENST00000438419 INSCQ1MX18 579 aa4.46□□□□□ -1.69
TRAPPC13-204ENST00000438419 NBPF8Q3BBV2 869 aa4.46□□□□□ -1.69
TRAPPC13-204ENST00000438419 TEDDM1Q5T9Z0 273 aa4.46□□□□□ -1.69
TRAPPC13-204ENST00000438419 TSHZ1Q6ZSZ6 1077 aa4.46□□□□□ -1.69
TRAPPC13-204ENST00000438419 DPP9Q86TI2 863 aa4.46□□□□□ -1.69
TRAPPC13-204ENST00000438419 YAF2Q8IY57 180 aa4.46□□□□□ -1.69
TRAPPC13-204ENST00000438419 SDR16C5Q8N3Y7 309 aa4.46□□□□□ -1.69
TRAPPC13-204ENST00000438419 SVIPQ8NHG7 77 aa4.46□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms