RNA–Protein interactions for RNA: ENST00000428082.6

TVP23C-203, Transcript of trans-golgi network vesicle protein 23 homolog C, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TVP23C, Length 1,911 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23C-203ENST00000428082 POP1Q99575 1024 aaKnown RBP16.6■□□□□ 0.25
TVP23C-203ENST00000428082 ROPN1BQ9BZX4 212 aaPredicted RBP16.6■□□□□ 0.25
TVP23C-203ENST00000428082 ROPN1Q9HAT0 212 aaPredicted RBP16.6■□□□□ 0.25
TVP23C-203ENST00000428082 WHRNQ9P202 907 aa16.6■□□□□ 0.25
TVP23C-203ENST00000428082 ANK1P16157 1881 aa16.6■□□□□ 0.25
TVP23C-203ENST00000428082 ATMINO43313 823 aaPredicted RBP16.59■□□□□ 0.25
TVP23C-203ENST00000428082 CLTBP09497 229 aa16.59■□□□□ 0.25
TVP23C-203ENST00000428082 RARAP10276 462 aa16.59■□□□□ 0.25
TVP23C-203ENST00000428082 UNGP13051 313 aaPredicted RBP16.59■□□□□ 0.25
TVP23C-203ENST00000428082 PTP4A2Q12974 167 aa16.59■□□□□ 0.25
TVP23C-203ENST00000428082 PPP1R7Q15435 360 aa16.59■□□□□ 0.25
TVP23C-203ENST00000428082 TWF2Q6IBS0 349 aaKnown RBP16.59■□□□□ 0.25
TVP23C-203ENST00000428082 AADACL2Q6P093 401 aa16.59■□□□□ 0.25
TVP23C-203ENST00000428082 TTC27Q6P3X3 843 aa16.59■□□□□ 0.25
TVP23C-203ENST00000428082 MCOLN2Q8IZK6 566 aa16.59■□□□□ 0.25
TVP23C-203ENST00000428082 RBAKQ9NYW8 714 aaPredicted RBP16.59■□□□□ 0.25
TVP23C-203ENST00000428082 ANAPC7Q9UJX3 599 aa16.59■□□□□ 0.25
TVP23C-203ENST00000428082 TBX21Q9UL17 535 aa16.59■□□□□ 0.25
TVP23C-203ENST00000428082 RGS16O15492 202 aaPredicted RBP16.58■□□□□ 0.25
TVP23C-203ENST00000428082 NBNO60934 754 aa16.58■□□□□ 0.25
TVP23C-203ENST00000428082 STAG3L1P0CL83 205 aa16.58■□□□□ 0.25
TVP23C-203ENST00000428082 CYP2C18P33260 490 aa16.58■□□□□ 0.25
TVP23C-203ENST00000428082 NSFP46459 744 aaKnown RBP16.58■□□□□ 0.25
TVP23C-203ENST00000428082 CCL23P55773 120 aa16.58■□□□□ 0.25
TVP23C-203ENST00000428082 DCAF4L1Q3SXM0 396 aa16.58■□□□□ 0.25
TVP23C-203ENST00000428082 COL13A1Q5TAT6 717 aaPredicted RBP16.58■□□□□ 0.25
TVP23C-203ENST00000428082 P3H4Q92791 437 aa16.58■□□□□ 0.25
TVP23C-203ENST00000428082 TATDN2Q93075 761 aa16.58■□□□□ 0.25
TVP23C-203ENST00000428082 CYFIP2Q96F07 1278 aa16.58■□□□□ 0.25
TVP23C-203ENST00000428082 SCLYQ96I15 445 aa16.58■□□□□ 0.25
TVP23C-203ENST00000428082 VCPIP1Q96JH7 1222 aa16.58■□□□□ 0.25
TVP23C-203ENST00000428082 MRPL47Q9HD33 250 aaKnown RBP16.58■□□□□ 0.25
TVP23C-203ENST00000428082 CHST12Q9NRB3 414 aa16.58■□□□□ 0.25
TVP23C-203ENST00000428082 TOPORSQ9NS56 1045 aaPredicted RBP16.58■□□□□ 0.25
TVP23C-203ENST00000428082 TMEM39AQ9NV64 488 aa16.58■□□□□ 0.25
TVP23C-203ENST00000428082 HES2Q9Y543 173 aa16.58■□□□□ 0.25
TVP23C-203ENST00000428082 ALPK3Q96L96 1907 aa16.58■□□□□ 0.25
TVP23C-203ENST00000428082 CITO14578 2027 aa16.58■□□□□ 0.24
TVP23C-203ENST00000428082 TET1Q8NFU7 2136 aa16.58■□□□□ 0.24
TVP23C-203ENST00000428082 C5orf60A6NFR6 353 aa16.58■□□□□ 0.24
TVP23C-203ENST00000428082 MGEA5O60502 916 aa16.58■□□□□ 0.24
TVP23C-203ENST00000428082 ITIH2P19823 946 aa16.58■□□□□ 0.24
TVP23C-203ENST00000428082 TBXAS1P24557 533 aaPredicted RBP16.58■□□□□ 0.24
TVP23C-203ENST00000428082 SEC24CP53992 1094 aa16.58■□□□□ 0.24
TVP23C-203ENST00000428082 SIX1Q15475 284 aaPredicted RBP16.58■□□□□ 0.24
TVP23C-203ENST00000428082 ZACNQ401N2 412 aa16.58■□□□□ 0.24
TVP23C-203ENST00000428082 SGO2Q562F6 1265 aa16.58■□□□□ 0.24
TVP23C-203ENST00000428082 BRSK2Q8IWQ3 736 aa16.58■□□□□ 0.24
TVP23C-203ENST00000428082 BBOF1Q8ND07 529 aa16.58■□□□□ 0.24
TVP23C-203ENST00000428082 TRIM6Q9C030 488 aaPredicted RBP16.58■□□□□ 0.24
TVP23C-203ENST00000428082 EPB41L4BQ9H329 900 aa16.58■□□□□ 0.24
TVP23C-203ENST00000428082 NXF3Q9H4D5 531 aaKnown RBP16.58■□□□□ 0.24
TVP23C-203ENST00000428082 TRIP11Q15643 1979 aa16.58■□□□□ 0.24
TVP23C-203ENST00000428082 GAS8O95995 478 aa16.57■□□□□ 0.24
TVP23C-203ENST00000428082 CXCL8P10145 99 aa16.57■□□□□ 0.24
TVP23C-203ENST00000428082 TNNI1P19237 187 aa16.57■□□□□ 0.24
TVP23C-203ENST00000428082 ATP5DP30049 168 aa16.57■□□□□ 0.24
TVP23C-203ENST00000428082 GRM5P41594 1212 aa16.57■□□□□ 0.24
TVP23C-203ENST00000428082 PIK3CAP42336 1068 aa16.57■□□□□ 0.24
TVP23C-203ENST00000428082 CENPCQ03188 943 aa16.57■□□□□ 0.24
TVP23C-203ENST00000428082 SLC29A2Q14542 456 aa16.57■□□□□ 0.24
TVP23C-203ENST00000428082 CEP128Q6ZU80 1094 aa16.57■□□□□ 0.24
TVP23C-203ENST00000428082 TAOK1Q7L7X3 1001 aa16.57■□□□□ 0.24
TVP23C-203ENST00000428082 APBB1IPQ7Z5R6 666 aaPredicted RBP16.57■□□□□ 0.24
TVP23C-203ENST00000428082 FAM212AQ96EL1 285 aa16.57■□□□□ 0.24
TVP23C-203ENST00000428082 FAM84AQ96KN4 292 aa16.57■□□□□ 0.24
TVP23C-203ENST00000428082 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16.57■□□□□ 0.243e-6■■■■■ 37.3
TVP23C-203ENST00000428082 SNTG2Q9NY99 539 aa16.57■□□□□ 0.24
TVP23C-203ENST00000428082 ANKRD65E5RJM6 399 aa16.57■□□□□ 0.24
TVP23C-203ENST00000428082 PSTPIP1O43586 416 aa16.57■□□□□ 0.24
TVP23C-203ENST00000428082 FSBPO95073 299 aa16.57■□□□□ 0.24
TVP23C-203ENST00000428082 CYP1A1P04798 512 aaPredicted RBP16.57■□□□□ 0.24
TVP23C-203ENST00000428082 CLTAP09496 248 aa16.57■□□□□ 0.24
TVP23C-203ENST00000428082 CETN2P41208 172 aa16.57■□□□□ 0.24
TVP23C-203ENST00000428082 AP3M2P53677 418 aa16.57■□□□□ 0.24
TVP23C-203ENST00000428082 DSC3Q14574 896 aa16.57■□□□□ 0.24
TVP23C-203ENST00000428082 LMBRD2Q68DH5 695 aaPredicted RBP16.57■□□□□ 0.24
TVP23C-203ENST00000428082 SMG8Q8ND04 991 aaKnown RBP16.57■□□□□ 0.24
TVP23C-203ENST00000428082 GADD45GIP1Q8TAE8 222 aaPredicted RBP16.57■□□□□ 0.24
TVP23C-203ENST00000428082 RAPGEF5Q92565 580 aa16.57■□□□□ 0.24
TVP23C-203ENST00000428082 RNF25Q96BH1 459 aaPredicted RBP16.57■□□□□ 0.24
TVP23C-203ENST00000428082 BTBD6Q96KE9 485 aa16.57■□□□□ 0.24
TVP23C-203ENST00000428082 ACTR5Q9H9F9 607 aaPredicted RBP16.57■□□□□ 0.24
TVP23C-203ENST00000428082 RPF1Q9H9Y2 349 aaKnown RBP16.57■□□□□ 0.24
TVP23C-203ENST00000428082 ACP6Q9NPH0 428 aa16.57■□□□□ 0.24
TVP23C-203ENST00000428082 TMEM51Q9NW97 253 aa16.57■□□□□ 0.24
TVP23C-203ENST00000428082 SCINQ9Y6U3 715 aa16.57■□□□□ 0.24
TVP23C-203ENST00000428082 RIPK2O43353 540 aa16.56■□□□□ 0.24
TVP23C-203ENST00000428082 HLA-DRAP01903 254 aa16.56■□□□□ 0.24
TVP23C-203ENST00000428082 C4BPAP04003 597 aaKnown RBP16.56■□□□□ 0.24
TVP23C-203ENST00000428082 MMP13P45452 471 aa16.56■□□□□ 0.24
TVP23C-203ENST00000428082 LIG3P49916 1009 aa16.56■□□□□ 0.24
TVP23C-203ENST00000428082 ERMARDQ5T6L9 678 aa16.56■□□□□ 0.24
TVP23C-203ENST00000428082 GKAP1Q5VSY0 366 aaPredicted RBP16.56■□□□□ 0.24
TVP23C-203ENST00000428082 ZDHHC14Q8IZN3 488 aa16.56■□□□□ 0.24
TVP23C-203ENST00000428082 ACAP3Q96P50 834 aa16.56■□□□□ 0.24
TVP23C-203ENST00000428082 ADAM2Q99965 735 aa16.56■□□□□ 0.24
TVP23C-203ENST00000428082 APOL6Q9BWW8 343 aa16.56■□□□□ 0.24
TVP23C-203ENST00000428082 RNF39Q9H2S5 420 aa16.56■□□□□ 0.24
TVP23C-203ENST00000428082 PRDM5Q9NQX1 630 aaPredicted RBP16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms