RNA–Protein interactions for RNA: ENST00000421462.5

PKP4-204, Transcript of plakophilin 4, humanhuman

TSL 2

Gene PKP4, Length 3,099 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-204ENST00000421462 AQP5P55064 265 aa17.43■□□□□ 0.38
PKP4-204ENST00000421462 PSMC5P62195 406 aa17.43■□□□□ 0.38
PKP4-204ENST00000421462 ARHGAP8P85298 464 aa17.43■□□□□ 0.38
PKP4-204ENST00000421462 SP4Q02446 784 aa17.43■□□□□ 0.38
PKP4-204ENST00000421462 ASPHQ12797 758 aa17.43■□□□□ 0.38
PKP4-204ENST00000421462 CDHR3Q6ZTQ4 885 aa17.43■□□□□ 0.38
PKP4-204ENST00000421462 KATNAL2Q8IYT4 538 aa17.43■□□□□ 0.38
PKP4-204ENST00000421462 SLITRK1Q96PX8 696 aa17.43■□□□□ 0.38
PKP4-204ENST00000421462 STRA6Q9BX79 667 aa17.43■□□□□ 0.38
PKP4-204ENST00000421462 PHACTR1Q9C0D0 580 aa17.43■□□□□ 0.38
PKP4-204ENST00000421462 ARHGEF4Q9NR80 690 aa17.43■□□□□ 0.38
PKP4-204ENST00000421462 DDX18Q9NVP1 670 aaKnown RBP17.43■□□□□ 0.38
PKP4-204ENST00000421462 PACSIN3Q9UKS6 424 aa17.43■□□□□ 0.38
PKP4-204ENST00000421462 I3L4J1 428 aa17.42■□□□□ 0.38
PKP4-204ENST00000421462 HNRNPDLO14979 420 aaKnown RBP17.42■□□□□ 0.38
PKP4-204ENST00000421462 PSTPIP1O43586 416 aa17.42■□□□□ 0.38
PKP4-204ENST00000421462 PFDN1O60925 122 aa17.42■□□□□ 0.38
PKP4-204ENST00000421462 AVILO75366 819 aa17.42■□□□□ 0.38
PKP4-204ENST00000421462 SERPINB6P35237 376 aa17.42■□□□□ 0.38
PKP4-204ENST00000421462 RARRES1P49788 294 aa17.42■□□□□ 0.38
PKP4-204ENST00000421462 USP46P62068 366 aa17.42■□□□□ 0.38
PKP4-204ENST00000421462 KBTBD12Q3ZCT8 623 aa17.42■□□□□ 0.38
PKP4-204ENST00000421462 BRDTQ58F21 947 aaPredicted RBP17.42■□□□□ 0.38
PKP4-204ENST00000421462 TRIM74Q86UV6 250 aa17.42■□□□□ 0.38
PKP4-204ENST00000421462 TRIM73Q86UV7 250 aa17.42■□□□□ 0.38
PKP4-204ENST00000421462 TMPRSS6Q8IU80 811 aa17.42■□□□□ 0.38
PKP4-204ENST00000421462 PPM1NQ8N819 430 aa17.42■□□□□ 0.38
PKP4-204ENST00000421462 ZNF398Q8TD17 642 aa17.42■□□□□ 0.38
PKP4-204ENST00000421462 MPP4Q96JB8 637 aa17.42■□□□□ 0.38
PKP4-204ENST00000421462 CCNL1Q9UK58 526 aaPredicted RBP17.42■□□□□ 0.38
PKP4-204ENST00000421462 CDK7P50613 346 aa17.42■□□□□ 0.38
PKP4-204ENST00000421462 ZC3H12AQ5D1E8 599 aaKnown RBP17.42■□□□□ 0.38
PKP4-204ENST00000421462 MARK2Q7KZI7 788 aaKnown RBP17.42■□□□□ 0.38
PKP4-204ENST00000421462 SPATA24Q86W54 205 aa17.42■□□□□ 0.38
PKP4-204ENST00000421462 RSAD2Q8WXG1 361 aa17.42■□□□□ 0.38
PKP4-204ENST00000421462 ABTB1Q969K4 478 aaPredicted RBP17.42■□□□□ 0.38
PKP4-204ENST00000421462 TEKT1Q969V4 418 aa17.42■□□□□ 0.38
PKP4-204ENST00000421462 ZC3H12CQ9C0D7 883 aaKnown RBP17.42■□□□□ 0.38
PKP4-204ENST00000421462 GNA15P30679 374 aa17.41■□□□□ 0.38
PKP4-204ENST00000421462 GPC3P51654 580 aa17.41■□□□□ 0.38
PKP4-204ENST00000421462 PEX6Q13608 980 aa17.41■□□□□ 0.38
PKP4-204ENST00000421462 BMPR2Q13873 1038 aa17.41■□□□□ 0.38
PKP4-204ENST00000421462 IGDCC3Q8IVU1 814 aa17.41■□□□□ 0.38
PKP4-204ENST00000421462 OGFOD1Q8N543 542 aa17.41■□□□□ 0.38
PKP4-204ENST00000421462 FAM81BQ96LP2 452 aa17.41■□□□□ 0.38
PKP4-204ENST00000421462 NYAP2Q9P242 653 aa17.41■□□□□ 0.38
PKP4-204ENST00000421462 PCDHB2Q9Y5E7 798 aa17.41■□□□□ 0.38
PKP4-204ENST00000421462 COPEO14579 308 aa17.41■□□□□ 0.38
PKP4-204ENST00000421462 INHBCP55103 352 aa17.41■□□□□ 0.38
PKP4-204ENST00000421462 MED21Q13503 144 aa17.41■□□□□ 0.38
PKP4-204ENST00000421462 PRKD1Q15139 912 aaPredicted RBP17.41■□□□□ 0.38
PKP4-204ENST00000421462 CHI3L2Q15782 390 aa17.41■□□□□ 0.38
PKP4-204ENST00000421462 GRAMD1BQ3KR37 738 aa17.41■□□□□ 0.38
PKP4-204ENST00000421462 SFT2D3Q587I9 215 aa17.41■□□□□ 0.38
PKP4-204ENST00000421462 WDR44Q5JSH3 913 aa17.41■□□□□ 0.38
PKP4-204ENST00000421462 PRR5LQ6MZQ0 368 aa17.41■□□□□ 0.38
PKP4-204ENST00000421462 APOBEC3HQ6NTF7 200 aaKnown RBP17.41■□□□□ 0.38
PKP4-204ENST00000421462 ADGRD1Q6QNK2 874 aa17.41■□□□□ 0.38
PKP4-204ENST00000421462 SPOCD1Q6ZMY3 1216 aa17.41■□□□□ 0.38
PKP4-204ENST00000421462 ACTL9Q8TC94 416 aa17.41■□□□□ 0.38
PKP4-204ENST00000421462 DCAKDQ8WVC6 231 aa17.41■□□□□ 0.38
PKP4-204ENST00000421462 NR1H4Q96RI1 486 aaPredicted RBP17.41■□□□□ 0.38
PKP4-204ENST00000421462 MRPL47Q9HD33 250 aaKnown RBP17.41■□□□□ 0.38
PKP4-204ENST00000421462 HOMER2Q9NSB8 354 aa17.41■□□□□ 0.38
PKP4-204ENST00000421462 XPO7Q9UIA9 1087 aaKnown RBP17.41■□□□□ 0.38
PKP4-204ENST00000421462 TM9SF1O15321 606 aa17.41■□□□□ 0.38
PKP4-204ENST00000421462 TOP3BO95985 862 aaKnown RBP17.41■□□□□ 0.38
PKP4-204ENST00000421462 SLC18A1P54219 525 aa17.41■□□□□ 0.38
PKP4-204ENST00000421462 VCPP55072 806 aaKnown RBP17.41■□□□□ 0.38
PKP4-204ENST00000421462 AQP4P55087 323 aa17.41■□□□□ 0.38
PKP4-204ENST00000421462 OTUD4Q01804 1114 aaKnown RBP17.41■□□□□ 0.38
PKP4-204ENST00000421462 BST1Q10588 318 aa17.41■□□□□ 0.38
PKP4-204ENST00000421462 RALGPS1Q5JS13 557 aa17.41■□□□□ 0.38
PKP4-204ENST00000421462 MON1BQ7L1V2 547 aa17.41■□□□□ 0.38
PKP4-204ENST00000421462 LRRN4Q8WUT4 740 aa17.41■□□□□ 0.38
PKP4-204ENST00000421462 CPT1BQ92523 772 aa17.41■□□□□ 0.38
PKP4-204ENST00000421462 EBF4Q9BQW3 602 aa17.41■□□□□ 0.38
PKP4-204ENST00000421462 WDR83Q9BRX9 315 aaKnown RBP17.41■□□□□ 0.38
PKP4-204ENST00000421462 A8MXQ7 604 aa17.4■□□□□ 0.38
PKP4-204ENST00000421462 ELK3P41970 407 aa17.4■□□□□ 0.38
PKP4-204ENST00000421462 ACOT2P49753 483 aa17.4■□□□□ 0.38
PKP4-204ENST00000421462 BTKQ06187 659 aa17.4■□□□□ 0.38
PKP4-204ENST00000421462 DLG1Q12959 904 aa17.4■□□□□ 0.38
PKP4-204ENST00000421462 NCOA4Q13772 614 aa17.4■□□□□ 0.38
PKP4-204ENST00000421462 GSTA3Q16772 222 aa17.4■□□□□ 0.38
PKP4-204ENST00000421462 CYP4A22Q5TCH4 519 aa17.4■□□□□ 0.38
PKP4-204ENST00000421462 FAM71DQ8N9W8 422 aa17.4■□□□□ 0.38
PKP4-204ENST00000421462 IWS1Q96ST2 819 aa17.4■□□□□ 0.38
PKP4-204ENST00000421462 FOXP3Q9BZS1 431 aa17.4■□□□□ 0.38
PKP4-204ENST00000421462 AVENQ9NQS1 362 aaPredicted RBP17.4■□□□□ 0.38
PKP4-204ENST00000421462 SH3BP1Q9Y3L3 701 aa17.4■□□□□ 0.38
PKP4-204ENST00000421462 SBF2Q86WG5 1849 aa17.4■□□□□ 0.38
PKP4-204ENST00000421462 TRIM49D1C9J1S8 452 aa17.4■□□□□ 0.38
PKP4-204ENST00000421462 TMEM63AO94886 807 aa17.4■□□□□ 0.38
PKP4-204ENST00000421462 C6orf222P0C671 652 aaPredicted RBP17.4■□□□□ 0.38
PKP4-204ENST00000421462 ATP6V1B1P15313 513 aa17.4■□□□□ 0.38
PKP4-204ENST00000421462 PEX2P28328 305 aa17.4■□□□□ 0.38
PKP4-204ENST00000421462 YWHABP31946 246 aaKnown RBP17.4■□□□□ 0.38
PKP4-204ENST00000421462 GRIA2P42262 883 aa17.4■□□□□ 0.38
PKP4-204ENST00000421462 UGCGQ16739 394 aa17.4■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms