RNA–Protein interactions for RNA: ENST00000409588.1

NIF3L1-205, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 1 (best) BASIC

Gene NIF3L1, Length 1,269 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-205ENST00000409588 FBXO4Q9UKT5 387 aa15.57■□□□□ 0.08
NIF3L1-205ENST00000409588 IKBKBO14920 756 aa15.56■□□□□ 0.08
NIF3L1-205ENST00000409588 MAPK13O15264 365 aa15.56■□□□□ 0.08
NIF3L1-205ENST00000409588 CST3P01034 146 aaPredicted RBP15.56■□□□□ 0.08
NIF3L1-205ENST00000409588 RPN1P04843 607 aaKnown RBP15.56■□□□□ 0.08
NIF3L1-205ENST00000409588 DCNP07585 359 aaKnown RBP15.56■□□□□ 0.08
NIF3L1-205ENST00000409588 GJA1P17302 382 aa15.56■□□□□ 0.08
NIF3L1-205ENST00000409588 CASP1P29466 404 aa15.56■□□□□ 0.08
NIF3L1-205ENST00000409588 GNL1P36915 607 aaPredicted RBP15.56■□□□□ 0.08
NIF3L1-205ENST00000409588 NUCB2P80303 420 aa15.56■□□□□ 0.08
NIF3L1-205ENST00000409588 ENPEPQ07075 957 aa15.56■□□□□ 0.08
NIF3L1-205ENST00000409588 UBXN2BQ14CS0 331 aa15.56■□□□□ 0.08
NIF3L1-205ENST00000409588 TPRG1Q6ZUI0 275 aa15.56■□□□□ 0.08
NIF3L1-205ENST00000409588 TTC9BQ8N6N2 239 aa15.56■□□□□ 0.08
NIF3L1-205ENST00000409588 CELF5Q8N6W0 485 aaKnown RBP15.56■□□□□ 0.08
NIF3L1-205ENST00000409588 FSIP1Q8NA03 581 aa15.56■□□□□ 0.08
NIF3L1-205ENST00000409588 PARD3BQ8TEW8 1205 aa15.56■□□□□ 0.08
NIF3L1-205ENST00000409588 NKD2Q969F2 451 aaPredicted RBP15.56■□□□□ 0.08
NIF3L1-205ENST00000409588 MMS19Q96T76 1030 aa15.56■□□□□ 0.08
NIF3L1-205ENST00000409588 LPIN3Q9BQK8 851 aa15.56■□□□□ 0.08
NIF3L1-205ENST00000409588 FOXQ1Q9C009 403 aa15.56■□□□□ 0.08
NIF3L1-205ENST00000409588 SNX25Q9H3E2 840 aa15.56■□□□□ 0.08
NIF3L1-205ENST00000409588 VRTNQ9H8Y1 702 aa15.56■□□□□ 0.08
NIF3L1-205ENST00000409588 IL21Q9HBE4 155 aa15.56■□□□□ 0.08
NIF3L1-205ENST00000409588 HEBP1Q9NRV9 189 aa15.56■□□□□ 0.08
NIF3L1-205ENST00000409588 MAGEC2Q9UBF1 373 aaPredicted RBP15.56■□□□□ 0.08
NIF3L1-205ENST00000409588 CALUO43852 315 aaPredicted RBP15.55■□□□□ 0.08
NIF3L1-205ENST00000409588 GFRA3O60609 400 aa15.55■□□□□ 0.08
NIF3L1-205ENST00000409588 PHACTR2O75167 634 aa15.55■□□□□ 0.08
NIF3L1-205ENST00000409588 SOAT2O75908 522 aa15.55■□□□□ 0.08
NIF3L1-205ENST00000409588 RHOBTB3O94955 611 aa15.55■□□□□ 0.08
NIF3L1-205ENST00000409588 F11P03951 625 aa15.55■□□□□ 0.08
NIF3L1-205ENST00000409588 HMGA1P17096 107 aaKnown RBP15.55■□□□□ 0.08
NIF3L1-205ENST00000409588 PFKLP17858 780 aa15.55■□□□□ 0.08
NIF3L1-205ENST00000409588 AVPR1AP37288 418 aa15.55■□□□□ 0.08
NIF3L1-205ENST00000409588 PPP3CCP48454 512 aa15.55■□□□□ 0.08
NIF3L1-205ENST00000409588 PDE6CP51160 858 aa15.55■□□□□ 0.08
NIF3L1-205ENST00000409588 NLRP12P59046 1061 aa15.55■□□□□ 0.08
NIF3L1-205ENST00000409588 TNNC1P63316 161 aa15.55■□□□□ 0.08
NIF3L1-205ENST00000409588 GRM2Q14416 872 aa15.55■□□□□ 0.08
NIF3L1-205ENST00000409588 KCNB1Q14721 858 aa15.55■□□□□ 0.08
NIF3L1-205ENST00000409588 PPP2R5DQ14738 602 aa15.55■□□□□ 0.08
NIF3L1-205ENST00000409588 NFIL3Q16649 462 aa15.55■□□□□ 0.08
NIF3L1-205ENST00000409588 WDR72Q3MJ13 1102 aa15.55■□□□□ 0.08
NIF3L1-205ENST00000409588 LMBRD2Q68DH5 695 aaPredicted RBP15.55■□□□□ 0.08
NIF3L1-205ENST00000409588 CMTM8Q8IZV2 173 aa15.55■□□□□ 0.08
NIF3L1-205ENST00000409588 MYCBPAPQ8TBZ2 947 aa15.55■□□□□ 0.08
NIF3L1-205ENST00000409588 GIPC2Q8TF65 315 aa15.55■□□□□ 0.08
NIF3L1-205ENST00000409588 MRPS31Q92665 395 aaKnown RBP15.55■□□□□ 0.08
NIF3L1-205ENST00000409588 SPATA17Q96L03 361 aa15.55■□□□□ 0.08
NIF3L1-205ENST00000409588 PHOX2BQ99453 314 aa15.55■□□□□ 0.08
NIF3L1-205ENST00000409588 PI4K2AQ9BTU6 479 aa15.55■□□□□ 0.08
NIF3L1-205ENST00000409588 MKNK1Q9BUB5 465 aa15.55■□□□□ 0.08
NIF3L1-205ENST00000409588 FAM126AQ9BYI3 521 aaPredicted RBP15.55■□□□□ 0.08
NIF3L1-205ENST00000409588 GTPBP4Q9BZE4 634 aaKnown RBP15.55■□□□□ 0.08
NIF3L1-205ENST00000409588 KIF9Q9HAQ2 790 aa15.55■□□□□ 0.08
NIF3L1-205ENST00000409588 TMLHEQ9NVH6 421 aa15.55■□□□□ 0.08
NIF3L1-205ENST00000409588 TRAF3IP3Q9Y228 551 aa15.55■□□□□ 0.08
NIF3L1-205ENST00000409588 FRMD4BQ9Y2L6 1034 aa15.55■□□□□ 0.08
NIF3L1-205ENST00000409588 TCHHQ07283 1943 aa15.55■□□□□ 0.08
NIF3L1-205ENST00000409588 PTPRJQ12913 1337 aa15.54■□□□□ 0.08
NIF3L1-205ENST00000409588 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP15.54■□□□□ 0.08
NIF3L1-205ENST00000409588 ARNTLO00327 626 aa15.54■□□□□ 0.08
NIF3L1-205ENST00000409588 LAMTOR5O43504 91 aa15.54■□□□□ 0.08
NIF3L1-205ENST00000409588 NOL4O94818 638 aa15.54■□□□□ 0.08
NIF3L1-205ENST00000409588 P4HA1P13674 534 aa15.54■□□□□ 0.08
NIF3L1-205ENST00000409588 CYP2F1P24903 491 aa15.54■□□□□ 0.08
NIF3L1-205ENST00000409588 RPL13P26373 211 aaKnown RBP15.54■□□□□ 0.08
NIF3L1-205ENST00000409588 NDUFA8P51970 172 aa15.54■□□□□ 0.08
NIF3L1-205ENST00000409588 AMPD2Q01433 879 aa15.54■□□□□ 0.08
NIF3L1-205ENST00000409588 ZNF268Q14587 947 aaPredicted RBP15.54■□□□□ 0.08
NIF3L1-205ENST00000409588 SGSM1Q2NKQ1 1148 aa15.54■□□□□ 0.08
NIF3L1-205ENST00000409588 KRBA2Q6ZNG9 492 aa15.54■□□□□ 0.08
NIF3L1-205ENST00000409588 MON1AQ86VX9 555 aa15.54■□□□□ 0.08
NIF3L1-205ENST00000409588 RALGPS2Q86X27 583 aaPredicted RBP15.54■□□□□ 0.08
NIF3L1-205ENST00000409588 GRAMD1CQ8IYS0 662 aa15.54■□□□□ 0.08
NIF3L1-205ENST00000409588 KIAA0895Q8NCT3 520 aa15.54■□□□□ 0.08
NIF3L1-205ENST00000409588 TMC2Q8TDI7 906 aa15.54■□□□□ 0.08
NIF3L1-205ENST00000409588 BPIFB1Q8TDL5 484 aa15.54■□□□□ 0.08
NIF3L1-205ENST00000409588 KBTBD7Q8WVZ9 684 aa15.54■□□□□ 0.08
NIF3L1-205ENST00000409588 FAM3CQ92520 227 aa15.54■□□□□ 0.08
NIF3L1-205ENST00000409588 TAF4BQ92750 862 aa15.54■□□□□ 0.08
NIF3L1-205ENST00000409588 SYT15Q9BQS2 421 aa15.54■□□□□ 0.08
NIF3L1-205ENST00000409588 SLC46A2Q9BY10 475 aa15.54■□□□□ 0.08
NIF3L1-205ENST00000409588 KCTD10Q9H3F6 313 aa15.54■□□□□ 0.08
NIF3L1-205ENST00000409588 FAM86C1Q9NVL1 165 aa15.54■□□□□ 0.08
NIF3L1-205ENST00000409588 PIAS3Q9Y6X2 628 aa15.54■□□□□ 0.08
NIF3L1-205ENST00000409588 TSC2P49815 1807 aa15.53■□□□□ 0.08
NIF3L1-205ENST00000409588 MYBPHLA2RUH7 354 aa15.53■□□□□ 0.08
NIF3L1-205ENST00000409588 GOLGA6L4A6NEF3 574 aa15.53■□□□□ 0.08
NIF3L1-205ENST00000409588 TRIM66O15016 1216 aa15.53■□□□□ 0.08
NIF3L1-205ENST00000409588 ZNF202O95125 648 aa15.53■□□□□ 0.08
NIF3L1-205ENST00000409588 ACAT1P24752 427 aaKnown RBP15.53■□□□□ 0.08
NIF3L1-205ENST00000409588 LMO2P25791 158 aa15.53■□□□□ 0.08
NIF3L1-205ENST00000409588 OSTM1Q86WC4 334 aa15.53■□□□□ 0.08
NIF3L1-205ENST00000409588 SYNPOQ8N3V7 929 aa15.53■□□□□ 0.08
NIF3L1-205ENST00000409588 GUF1Q8N442 669 aaKnown RBP15.53■□□□□ 0.08
NIF3L1-205ENST00000409588 KIAA1958Q8N8K9 716 aa15.53■□□□□ 0.08
NIF3L1-205ENST00000409588 ZNF516Q92618 1163 aa15.53■□□□□ 0.08
NIF3L1-205ENST00000409588 EXOC4Q96A65 974 aa15.53■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms