RNA–Protein interactions for RNA: ENST00000409472.5

SCAMP4-202, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 2 BASIC

Gene SCAMP4, Length 2,394 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-202ENST00000409472 OR6J1Q8NGC5 347 aa16■□□□□ 0.15
SCAMP4-202ENST00000409472 ZMAT2Q96NC0 199 aaKnown RBP16■□□□□ 0.15
SCAMP4-202ENST00000409472 ZNF518BQ9C0D4 1074 aa16■□□□□ 0.15
SCAMP4-202ENST00000409472 CAPN7Q9Y6W3 813 aa16■□□□□ 0.15
SCAMP4-202ENST00000409472 C3orf70A6NLC5 250 aaPredicted RBP16■□□□□ 0.15
SCAMP4-202ENST00000409472 KRT3P12035 628 aa16■□□□□ 0.15
SCAMP4-202ENST00000409472 CDKN2BP42772 138 aa16■□□□□ 0.15
SCAMP4-202ENST00000409472 GTF2A2P52657 109 aa16■□□□□ 0.15
SCAMP4-202ENST00000409472 CRYMQ14894 314 aa16■□□□□ 0.15
SCAMP4-202ENST00000409472 SLMAPQ14BN4 828 aa16■□□□□ 0.15
SCAMP4-202ENST00000409472 KYNUQ16719 465 aa16■□□□□ 0.15
SCAMP4-202ENST00000409472 DUSP28Q4G0W2 176 aa16■□□□□ 0.15
SCAMP4-202ENST00000409472 PREPLQ4J6C6 727 aaPredicted RBP16■□□□□ 0.15
SCAMP4-202ENST00000409472 IZUMO3Q5VZ72 239 aa16■□□□□ 0.15
SCAMP4-202ENST00000409472 C12orf29Q8N999 325 aa16■□□□□ 0.15
SCAMP4-202ENST00000409472 ZNF473Q8WTR7 871 aaKnown RBP16■□□□□ 0.15
SCAMP4-202ENST00000409472 MAIP1Q8WWC4 291 aa16■□□□□ 0.15
SCAMP4-202ENST00000409472 EIF2AQ9BY44 585 aaKnown RBP16■□□□□ 0.15
SCAMP4-202ENST00000409472 WDR3Q9UNX4 943 aaKnown RBP eCLIP16■□□□□ 0.15
SCAMP4-202ENST00000409472 NME7Q9Y5B8 376 aa16■□□□□ 0.15
SCAMP4-202ENST00000409472 HCRTO43612 131 aa15.99■□□□□ 0.15
SCAMP4-202ENST00000409472 FSBPO95073 299 aa15.99■□□□□ 0.15
SCAMP4-202ENST00000409472 NDST1P52848 882 aa15.99■□□□□ 0.15
SCAMP4-202ENST00000409472 POU5F1BQ06416 359 aa15.99■□□□□ 0.15
SCAMP4-202ENST00000409472 ACVR2BQ13705 512 aa15.99■□□□□ 0.15
SCAMP4-202ENST00000409472 AUHQ13825 339 aaKnown RBP15.99■□□□□ 0.15
SCAMP4-202ENST00000409472 QPCTQ16769 361 aa15.99■□□□□ 0.15
SCAMP4-202ENST00000409472 P3H1Q32P28 736 aa15.99■□□□□ 0.15
SCAMP4-202ENST00000409472 GLRA4Q5JXX5 417 aa15.99■□□□□ 0.15
SCAMP4-202ENST00000409472 SH3PXD2AQ5TCZ1 1133 aa15.99■□□□□ 0.15
SCAMP4-202ENST00000409472 TRNP1Q6NT89 227 aa15.99■□□□□ 0.15
SCAMP4-202ENST00000409472 GRK7Q8WTQ7 553 aa15.99■□□□□ 0.15
SCAMP4-202ENST00000409472 PGM2Q96G03 612 aa15.99■□□□□ 0.15
SCAMP4-202ENST00000409472 TMEM176AQ96HP8 235 aa15.99■□□□□ 0.15
SCAMP4-202ENST00000409472 FAXDC2Q96IV6 333 aa15.99■□□□□ 0.15
SCAMP4-202ENST00000409472 CCT8L2Q96SF2 557 aa15.99■□□□□ 0.15
SCAMP4-202ENST00000409472 TINF2Q9BSI4 451 aa15.99■□□□□ 0.15
SCAMP4-202ENST00000409472 COL1A2P08123 1366 aa15.99■□□□□ 0.15
SCAMP4-202ENST00000409472 A0A1B0GUA9 196 aa15.99■□□□□ 0.15
SCAMP4-202ENST00000409472 A6NNZ2 444 aa15.99■□□□□ 0.15
SCAMP4-202ENST00000409472 NEBLO76041 1014 aa15.99■□□□□ 0.15
SCAMP4-202ENST00000409472 NPTXRO95502 500 aa15.99■□□□□ 0.15
SCAMP4-202ENST00000409472 ITIH2P19823 946 aa15.99■□□□□ 0.15
SCAMP4-202ENST00000409472 YWHAEP62258 255 aaKnown RBP15.99■□□□□ 0.15
SCAMP4-202ENST00000409472 TUBB8Q3ZCM7 444 aa15.99■□□□□ 0.15
SCAMP4-202ENST00000409472 PPP1R2P3Q6NXS1 205 aa15.99■□□□□ 0.15
SCAMP4-202ENST00000409472 ZNF365Q70YC5 407 aa15.99■□□□□ 0.15
SCAMP4-202ENST00000409472 GSTA5Q7RTV2 222 aa15.99■□□□□ 0.15
SCAMP4-202ENST00000409472 RCOR2Q8IZ40 523 aa15.99■□□□□ 0.15
SCAMP4-202ENST00000409472 ARFGAP2Q8N6H7 521 aa15.99■□□□□ 0.15
SCAMP4-202ENST00000409472 NIPA2Q8N8Q9 360 aa15.99■□□□□ 0.15
SCAMP4-202ENST00000409472 KIF12Q96FN5 646 aa15.99■□□□□ 0.15
SCAMP4-202ENST00000409472 RBM41Q96IZ5 413 aaKnown RBP15.99■□□□□ 0.15
SCAMP4-202ENST00000409472 SELENOSQ9BQE4 189 aa15.99■□□□□ 0.15
SCAMP4-202ENST00000409472 LPIN3Q9BQK8 851 aa15.99■□□□□ 0.15
SCAMP4-202ENST00000409472 LHX5Q9H2C1 402 aa15.99■□□□□ 0.15
SCAMP4-202ENST00000409472 DPP3Q9NY33 737 aa15.99■□□□□ 0.15
SCAMP4-202ENST00000409472 NINJ2Q9NZG7 142 aa15.99■□□□□ 0.15
SCAMP4-202ENST00000409472 TUBGCP4Q9UGJ1 667 aa15.99■□□□□ 0.15
SCAMP4-202ENST00000409472 ANAPC5Q9UJX4 755 aa15.99■□□□□ 0.15
SCAMP4-202ENST00000409472 TRIP12Q14669 1992 aaPredicted RBP15.98■□□□□ 0.15
SCAMP4-202ENST00000409472 IQCA1LA6NCM1 817 aa15.98■□□□□ 0.15
SCAMP4-202ENST00000409472 RGS16O15492 202 aaPredicted RBP15.98■□□□□ 0.15
SCAMP4-202ENST00000409472 PAEPP09466 180 aa15.98■□□□□ 0.15
SCAMP4-202ENST00000409472 CREB1P16220 341 aa15.98■□□□□ 0.15
SCAMP4-202ENST00000409472 HOXA11P31270 313 aaPredicted RBP15.98■□□□□ 0.15
SCAMP4-202ENST00000409472 TNFAIP2Q03169 654 aa15.98■□□□□ 0.15
SCAMP4-202ENST00000409472 PIGHQ14442 188 aaPredicted RBP15.98■□□□□ 0.15
SCAMP4-202ENST00000409472 ZNF467Q7Z7K2 595 aaPredicted RBP15.98■□□□□ 0.15
SCAMP4-202ENST00000409472 ANKRD23Q86SG2 305 aa15.98■□□□□ 0.15
SCAMP4-202ENST00000409472 GTF3C2Q8WUA4 911 aaPredicted RBP15.98■□□□□ 0.15
SCAMP4-202ENST00000409472 C9orf72Q96LT7 481 aa15.98■□□□□ 0.15
SCAMP4-202ENST00000409472 TRAIPQ9BWF2 469 aa15.98■□□□□ 0.15
SCAMP4-202ENST00000409472 ASB7Q9H672 318 aa15.98■□□□□ 0.15
SCAMP4-202ENST00000409472 SYNCQ9H7C4 482 aa15.98■□□□□ 0.15
SCAMP4-202ENST00000409472 FLRT1Q9NZU1 646 aa15.98■□□□□ 0.15
SCAMP4-202ENST00000409472 PCSK1NQ9UHG2 260 aa15.98■□□□□ 0.15
SCAMP4-202ENST00000409472 SIGLEC16A6NMB1 481 aa15.98■□□□□ 0.15
SCAMP4-202ENST00000409472 STRNO43815 780 aa15.98■□□□□ 0.15
SCAMP4-202ENST00000409472 CHN1P15882 459 aa15.98■□□□□ 0.15
SCAMP4-202ENST00000409472 GPD2P43304 727 aa15.98■□□□□ 0.15
SCAMP4-202ENST00000409472 BYSLQ13895 437 aaKnown RBP15.98■□□□□ 0.15
SCAMP4-202ENST00000409472 TFDP3Q5H9I0 405 aa15.98■□□□□ 0.15
SCAMP4-202ENST00000409472 HP1BP3Q5SSJ5 553 aaPredicted RBP15.98■□□□□ 0.15
SCAMP4-202ENST00000409472 LRRC38Q5VT99 294 aa15.98■□□□□ 0.15
SCAMP4-202ENST00000409472 C18orf25Q96B23 403 aaPredicted RBP15.98■□□□□ 0.15
SCAMP4-202ENST00000409472 HEXIM2Q96MH2 286 aaKnown RBP15.98■□□□□ 0.15
SCAMP4-202ENST00000409472 ACAP3Q96P50 834 aa15.98■□□□□ 0.15
SCAMP4-202ENST00000409472 OSMRQ99650 979 aa15.98■□□□□ 0.15
SCAMP4-202ENST00000409472 TMEM121Q9BTD3 319 aa15.98■□□□□ 0.15
SCAMP4-202ENST00000409472 SNTG2Q9NY99 539 aa15.98■□□□□ 0.15
SCAMP4-202ENST00000409472 CPA4Q9UI42 421 aa15.98■□□□□ 0.15
SCAMP4-202ENST00000409472 RASGRF2O14827 1237 aa15.97■□□□□ 0.15
SCAMP4-202ENST00000409472 TRAPPC3O43617 180 aa15.97■□□□□ 0.15
SCAMP4-202ENST00000409472 HOXD8P13378 290 aaPredicted RBP15.97■□□□□ 0.15
SCAMP4-202ENST00000409472 GCLCP48506 637 aaPredicted RBP15.97■□□□□ 0.15
SCAMP4-202ENST00000409472 BIRC2Q13490 618 aa15.97■□□□□ 0.15
SCAMP4-202ENST00000409472 GPR162Q16538 588 aa15.97■□□□□ 0.15
SCAMP4-202ENST00000409472 SYDE1Q6ZW31 735 aaPredicted RBP15.97■□□□□ 0.15
SCAMP4-202ENST00000409472 PNMA8AQ86V59 439 aaPredicted RBP15.97■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms