RNA–Protein interactions for RNA: ENST00000399804.5

SCAF4-202, Transcript of SR-related CTD associated factor 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCAF4, Length 4,127 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-202ENST00000399804 GPATCH2LQ9NWQ4 482 aa14.72□□□□□ -0.05
SCAF4-202ENST00000399804 TPX2Q9ULW0 747 aaKnown RBP14.72□□□□□ -0.05
SCAF4-202ENST00000399804 SSX2IPQ9Y2D8 614 aa14.72□□□□□ -0.05
SCAF4-202ENST00000399804 KPNA6O60684 536 aa14.72□□□□□ -0.05
SCAF4-202ENST00000399804 ACO1P21399 889 aaKnown RBP14.72□□□□□ -0.05
SCAF4-202ENST00000399804 ASTE1Q2TB18 679 aaPredicted RBP14.72□□□□□ -0.05
SCAF4-202ENST00000399804 DENND1BQ6P3S1 775 aa14.72□□□□□ -0.05
SCAF4-202ENST00000399804 CDKL3Q8IVW4 592 aaPredicted RBP14.72□□□□□ -0.05
SCAF4-202ENST00000399804 FAM71DQ8N9W8 422 aa14.72□□□□□ -0.05
SCAF4-202ENST00000399804 ARL8AQ96BM9 186 aa14.72□□□□□ -0.05
SCAF4-202ENST00000399804 CNPY3Q9BT09 278 aa14.72□□□□□ -0.05
SCAF4-202ENST00000399804 NMRK2Q9NPI5 230 aa14.72□□□□□ -0.05
SCAF4-202ENST00000399804 ZMYM2Q9UBW7 1377 aa14.71□□□□□ -0.05
SCAF4-202ENST00000399804 KBTBD13C9JR72 458 aa14.71□□□□□ -0.05
SCAF4-202ENST00000399804 TRAPPC3O43617 180 aa14.71□□□□□ -0.05
SCAF4-202ENST00000399804 MICAL2O94851 1124 aa14.71□□□□□ -0.05
SCAF4-202ENST00000399804 ACAT1P24752 427 aaKnown RBP14.71□□□□□ -0.05
SCAF4-202ENST00000399804 LRRC14Q15048 493 aa14.71□□□□□ -0.05
SCAF4-202ENST00000399804 TRMT10CQ7L0Y3 403 aaKnown RBP14.71□□□□□ -0.05
SCAF4-202ENST00000399804 PID1Q7Z2X4 250 aa14.71□□□□□ -0.05
SCAF4-202ENST00000399804 PPM1NQ8N819 430 aa14.71□□□□□ -0.05
SCAF4-202ENST00000399804 ALG3Q92685 438 aa14.71□□□□□ -0.05
SCAF4-202ENST00000399804 CPSF3Q9UKF6 684 aaKnown RBP14.71□□□□□ -0.05
SCAF4-202ENST00000399804 RRP15Q9Y3B9 282 aaKnown RBP14.71□□□□□ -0.05
SCAF4-202ENST00000399804 CASTOR2A6NHX0 329 aa14.71□□□□□ -0.05
SCAF4-202ENST00000399804 PAEPP09466 180 aa14.71□□□□□ -0.05
SCAF4-202ENST00000399804 C6orf163Q5TEZ5 329 aa14.71□□□□□ -0.05
SCAF4-202ENST00000399804 DAB2IPQ5VWQ8 1189 aa14.71□□□□□ -0.05
SCAF4-202ENST00000399804 ATP11CQ8NB49 1132 aa14.71□□□□□ -0.05
SCAF4-202ENST00000399804 PCSK9Q8NBP7 692 aaKnown RBP14.71□□□□□ -0.05
SCAF4-202ENST00000399804 SLC7A14Q8TBB6 771 aa14.71□□□□□ -0.05
SCAF4-202ENST00000399804 HASPINQ8TF76 798 aa14.71□□□□□ -0.05
SCAF4-202ENST00000399804 NCANO14594 1321 aa14.71□□□□□ -0.05
SCAF4-202ENST00000399804 UMODL1Q5DID0 1318 aa14.71□□□□□ -0.05
SCAF4-202ENST00000399804 AP1G2O75843 785 aa14.71□□□□□ -0.06
SCAF4-202ENST00000399804 SUN1O94901 812 aa14.71□□□□□ -0.06
SCAF4-202ENST00000399804 ALDH1A1P00352 501 aa14.71□□□□□ -0.06
SCAF4-202ENST00000399804 CYP1A2P05177 515 aa14.71□□□□□ -0.06
SCAF4-202ENST00000399804 ZBTB48P10074 688 aaPredicted RBP14.71□□□□□ -0.06
SCAF4-202ENST00000399804 SMAD1Q15797 465 aaKnown RBP14.71□□□□□ -0.06
SCAF4-202ENST00000399804 CCDC6Q16204 474 aa14.71□□□□□ -0.06
SCAF4-202ENST00000399804 LRIG3Q6UXM1 1119 aa14.71□□□□□ -0.06
SCAF4-202ENST00000399804 FAM172AQ8WUF8 416 aa14.71□□□□□ -0.06
SCAF4-202ENST00000399804 HES6Q96HZ4 224 aa14.71□□□□□ -0.06
SCAF4-202ENST00000399804 SDAD1Q9NVU7 687 aaKnown RBP eCLIP14.71□□□□□ -0.067e-6■■■□□ 16.5
SCAF4-202ENST00000399804 USP18Q9UMW8 372 aa14.71□□□□□ -0.06
SCAF4-202ENST00000399804 TELO2Q9Y4R8 837 aa14.71□□□□□ -0.06
SCAF4-202ENST00000399804 GPR25O00155 361 aa14.7□□□□□ -0.06
SCAF4-202ENST00000399804 MMP3P08254 477 aa14.7□□□□□ -0.06
SCAF4-202ENST00000399804 SRGAP2BP0DMP2 458 aa14.7□□□□□ -0.06
SCAF4-202ENST00000399804 MYBL2P10244 700 aa14.7□□□□□ -0.06
SCAF4-202ENST00000399804 ELF1P32519 619 aa14.7□□□□□ -0.06
SCAF4-202ENST00000399804 BCAT1P54687 386 aa14.7□□□□□ -0.06
SCAF4-202ENST00000399804 NOMO3P69849 1222 aa14.7□□□□□ -0.06
SCAF4-202ENST00000399804 MAMLD1Q13495 774 aa14.7□□□□□ -0.06
SCAF4-202ENST00000399804 MFSD7Q6UXD7 560 aa14.7□□□□□ -0.06
SCAF4-202ENST00000399804 SPOCD1Q6ZMY3 1216 aa14.7□□□□□ -0.06
SCAF4-202ENST00000399804 SCUBE3Q8IX30 993 aa14.7□□□□□ -0.06
SCAF4-202ENST00000399804 RILPQ96NA2 401 aa14.7□□□□□ -0.06
SCAF4-202ENST00000399804 PABPC3Q9H361 631 aaKnown RBP14.7□□□□□ -0.06
SCAF4-202ENST00000399804 HAUS2Q9NVX0 235 aa14.7□□□□□ -0.06
SCAF4-202ENST00000399804 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP14.7□□□□□ -0.06
SCAF4-202ENST00000399804 TRPA1O75762 1119 aa14.7□□□□□ -0.06
SCAF4-202ENST00000399804 MCL1Q07820 350 aa14.7□□□□□ -0.06
SCAF4-202ENST00000399804 NT5DC4Q86YG4 428 aa14.7□□□□□ -0.06
SCAF4-202ENST00000399804 ACTL9Q8TC94 416 aa14.7□□□□□ -0.06
SCAF4-202ENST00000399804 TBC1D31Q96DN5 1066 aa14.7□□□□□ -0.06
SCAF4-202ENST00000399804 GAD1Q99259 594 aa14.7□□□□□ -0.06
SCAF4-202ENST00000399804 C4AP0C0L4 1744 aa14.7□□□□□ -0.06
SCAF4-202ENST00000399804 KPNA7A9QM74 516 aa14.7□□□□□ -0.06
SCAF4-202ENST00000399804 UPP2O95045 317 aa14.7□□□□□ -0.06
SCAF4-202ENST00000399804 POMCP01189 267 aa14.7□□□□□ -0.06
SCAF4-202ENST00000399804 NCAM1P13591 858 aa14.7□□□□□ -0.06
SCAF4-202ENST00000399804 SMPD1P17405 629 aa14.7□□□□□ -0.06
SCAF4-202ENST00000399804 TPI1P60174 286 aa14.7□□□□□ -0.06
SCAF4-202ENST00000399804 RPL7AP62424 266 aaKnown RBP14.7□□□□□ -0.06
SCAF4-202ENST00000399804 OTUD4Q01804 1114 aaKnown RBP14.7□□□□□ -0.06
SCAF4-202ENST00000399804 LENG1Q96BZ8 264 aaPredicted RBP14.7□□□□□ -0.06
SCAF4-202ENST00000399804 ELAC2Q9BQ52 826 aaKnown RBP14.7□□□□□ -0.06
SCAF4-202ENST00000399804 TMEM121Q9BTD3 319 aa14.7□□□□□ -0.06
SCAF4-202ENST00000399804 SLTMQ9NWH9 1034 aaKnown RBP eCLIP14.7□□□□□ -0.06
SCAF4-202ENST00000399804 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP14.7□□□□□ -0.06
SCAF4-202ENST00000399804 CAPN7Q9Y6W3 813 aa14.7□□□□□ -0.06
SCAF4-202ENST00000399804 THSD7AQ9UPZ6 1657 aa14.7□□□□□ -0.06
SCAF4-202ENST00000399804 IQANK1A0A1B0GTG1 560 aa14.69□□□□□ -0.06
SCAF4-202ENST00000399804 MAGEA4P43358 317 aa14.69□□□□□ -0.06
SCAF4-202ENST00000399804 ZNF268Q14587 947 aaPredicted RBP14.69□□□□□ -0.06
SCAF4-202ENST00000399804 CCNG2Q16589 344 aa14.69□□□□□ -0.06
SCAF4-202ENST00000399804 TTC31Q49AM3 519 aaPredicted RBP14.69□□□□□ -0.06
SCAF4-202ENST00000399804 TSHZ1Q6ZSZ6 1077 aa14.69□□□□□ -0.06
SCAF4-202ENST00000399804 SPATS2Q86XZ4 545 aaKnown RBP14.69□□□□□ -0.06
SCAF4-202ENST00000399804 LOC102724159A0A0B4J2E5 919 aa14.69□□□□□ -0.06
SCAF4-202ENST00000399804 KRT37O76014 449 aa14.69□□□□□ -0.06
SCAF4-202ENST00000399804 RFC1P35251 1148 aaPredicted RBP14.69□□□□□ -0.06
SCAF4-202ENST00000399804 PWP2Q15269 919 aaKnown RBP14.69□□□□□ -0.06
SCAF4-202ENST00000399804 ATP13A4Q4VNC1 1196 aa14.69□□□□□ -0.06
SCAF4-202ENST00000399804 FAM131BQ86XD5 332 aa14.69□□□□□ -0.06
SCAF4-202ENST00000399804 C3orf20Q8ND61 904 aa14.69□□□□□ -0.06
SCAF4-202ENST00000399804 PABPN1LA6NDY0 278 aaKnown RBP14.69□□□□□ -0.06
SCAF4-202ENST00000399804 M0QYT0 321 aa14.69□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms