RNA–Protein interactions for RNA: ENST00000395823.2

HMGB1P10-201, Transcript of high mobility group box 1 pseudogene 10, humanhuman

BASIC

Gene HMGB1P10, Length 563 nt, Biotype processed pseudogene.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P10-201ENST00000395823 MANEALQ5VSG8 457 aa5.86□□□□□ -1.47
HMGB1P10-201ENST00000395823 AGAP9Q5VTM2 703 aa5.86□□□□□ -1.47
HMGB1P10-201ENST00000395823 SPTY2D1Q68D10 685 aaPredicted RBP5.86□□□□□ -1.47
HMGB1P10-201ENST00000395823 MRNIPQ6NTE8 343 aa5.86□□□□□ -1.47
HMGB1P10-201ENST00000395823 ARHGEF18Q6ZSZ5 1173 aa5.86□□□□□ -1.47
HMGB1P10-201ENST00000395823 TMPRSS9Q7Z410 1059 aa5.86□□□□□ -1.47
HMGB1P10-201ENST00000395823 TMTC1Q8IUR5 882 aa5.86□□□□□ -1.47
HMGB1P10-201ENST00000395823 LGI4Q8N135 537 aa5.86□□□□□ -1.47
HMGB1P10-201ENST00000395823 POC1BQ8TC44 478 aa5.86□□□□□ -1.47
HMGB1P10-201ENST00000395823 SPPL3Q8TCT6 385 aa5.86□□□□□ -1.47
HMGB1P10-201ENST00000395823 BPIFB1Q8TDL5 484 aa5.86□□□□□ -1.47
HMGB1P10-201ENST00000395823 ASB12Q8WXK4 309 aa5.86□□□□□ -1.47
HMGB1P10-201ENST00000395823 USP13Q92995 863 aaPredicted RBP5.86□□□□□ -1.47
HMGB1P10-201ENST00000395823 MOGAT1Q96PD6 335 aa5.86□□□□□ -1.47
HMGB1P10-201ENST00000395823 OR14A2Q96R54 314 aa5.86□□□□□ -1.47
HMGB1P10-201ENST00000395823 SLC46A2Q9BY10 475 aa5.86□□□□□ -1.47
HMGB1P10-201ENST00000395823 PABPC3Q9H361 631 aaKnown RBP5.86□□□□□ -1.47
HMGB1P10-201ENST00000395823 CLCA2Q9UQC9 943 aa5.86□□□□□ -1.47
HMGB1P10-201ENST00000395823 hCG_1984214I3L0E3 225 aa5.85□□□□□ -1.47
HMGB1P10-201ENST00000395823 J3KRW8 73 aa5.85□□□□□ -1.47
HMGB1P10-201ENST00000395823 FCHO1O14526 889 aa5.85□□□□□ -1.47
HMGB1P10-201ENST00000395823 ATXN1LP0C7T5 689 aaKnown RBP5.85□□□□□ -1.47
HMGB1P10-201ENST00000395823 IDEP14735 1019 aa5.85□□□□□ -1.47
HMGB1P10-201ENST00000395823 JUPP14923 745 aa5.85□□□□□ -1.47
HMGB1P10-201ENST00000395823 BDNFP23560 247 aa5.85□□□□□ -1.47
HMGB1P10-201ENST00000395823 MGAT1P26572 445 aa5.85□□□□□ -1.47
HMGB1P10-201ENST00000395823 MSX2P35548 267 aaPredicted RBP5.85□□□□□ -1.47
HMGB1P10-201ENST00000395823 GCLCP48506 637 aaPredicted RBP5.85□□□□□ -1.47
HMGB1P10-201ENST00000395823 RABGGTBP53611 331 aa5.85□□□□□ -1.47
HMGB1P10-201ENST00000395823 GEMIN4P57678 1058 aaKnown RBP5.85□□□□□ -1.47
HMGB1P10-201ENST00000395823 PIGFQ07326 219 aa5.85□□□□□ -1.47
HMGB1P10-201ENST00000395823 NSUN2Q08J23 767 aaKnown RBP eCLIP5.85□□□□□ -1.47
HMGB1P10-201ENST00000395823 TBX2Q13207 712 aaPredicted RBP5.85□□□□□ -1.47
HMGB1P10-201ENST00000395823 INSCQ1MX18 579 aa5.85□□□□□ -1.47
HMGB1P10-201ENST00000395823 PTCHD3Q3KNS1 767 aa5.85□□□□□ -1.47
HMGB1P10-201ENST00000395823 ZNF648Q5T619 568 aaPredicted RBP5.85□□□□□ -1.47
HMGB1P10-201ENST00000395823 FAXCQ5TGI0 409 aa5.85□□□□□ -1.47
HMGB1P10-201ENST00000395823 CACHD1Q5VU97 1274 aa5.85□□□□□ -1.47
HMGB1P10-201ENST00000395823 SLC30A10Q6XR72 485 aa5.85□□□□□ -1.47
HMGB1P10-201ENST00000395823 PLEKHH3Q7Z736 793 aa5.85□□□□□ -1.47
HMGB1P10-201ENST00000395823 KRT73Q86Y46 540 aa5.85□□□□□ -1.47
HMGB1P10-201ENST00000395823 GATAD2AQ86YP4 633 aa5.85□□□□□ -1.47
HMGB1P10-201ENST00000395823 CPOQ8IVL8 374 aa5.85□□□□□ -1.47
HMGB1P10-201ENST00000395823 HERC6Q8IVU3 1022 aa5.85□□□□□ -1.47
HMGB1P10-201ENST00000395823 TMEM151BQ8IW70 566 aa5.85□□□□□ -1.47
HMGB1P10-201ENST00000395823 RHOT2Q8IXI1 618 aa5.85□□□□□ -1.47
HMGB1P10-201ENST00000395823 SP8Q8IXZ3 490 aa5.85□□□□□ -1.47
HMGB1P10-201ENST00000395823 SYT8Q8NBV8 401 aa5.85□□□□□ -1.47
HMGB1P10-201ENST00000395823 MED15Q96RN5 788 aa5.85□□□□□ -1.47
HMGB1P10-201ENST00000395823 SMOQ99835 787 aa5.85□□□□□ -1.47
HMGB1P10-201ENST00000395823 DDX23Q9BUQ8 820 aaKnown RBP5.85□□□□□ -1.47
HMGB1P10-201ENST00000395823 CXorf36Q9H7Y0 433 aa5.85□□□□□ -1.47
HMGB1P10-201ENST00000395823 PRDM8Q9NQV8 689 aa5.85□□□□□ -1.47
HMGB1P10-201ENST00000395823 FEM1BQ9UK73 627 aa5.85□□□□□ -1.47
HMGB1P10-201ENST00000395823 SHOC2Q9UQ13 582 aa5.85□□□□□ -1.47
HMGB1P10-201ENST00000395823 HPSEQ9Y251 543 aa5.85□□□□□ -1.47
HMGB1P10-201ENST00000395823 MRPS17Q9Y2R5 130 aaKnown RBP5.85□□□□□ -1.47
HMGB1P10-201ENST00000395823 DUSP10Q9Y6W6 482 aa5.85□□□□□ -1.47
HMGB1P10-201ENST00000395823 AATKQ6ZMQ8 1374 aa5.84□□□□□ -1.47
HMGB1P10-201ENST00000395823 OR2W5A6NFC9 320 aa5.84□□□□□ -1.47
HMGB1P10-201ENST00000395823 DHHO43323 396 aa5.84□□□□□ -1.47
HMGB1P10-201ENST00000395823 PIAS2O75928 621 aa5.84□□□□□ -1.47
HMGB1P10-201ENST00000395823 RAD17O75943 681 aa5.84□□□□□ -1.47
HMGB1P10-201ENST00000395823 USP1O94782 785 aa5.84□□□□□ -1.47
HMGB1P10-201ENST00000395823 IPO13O94829 963 aaKnown RBP5.84□□□□□ -1.47
HMGB1P10-201ENST00000395823 SUN1O94901 812 aa5.84□□□□□ -1.47
HMGB1P10-201ENST00000395823 POLBP06746 335 aa5.84□□□□□ -1.47
HMGB1P10-201ENST00000395823 ITGA2BP08514 1039 aa5.84□□□□□ -1.47
HMGB1P10-201ENST00000395823 TNFAIP3P21580 790 aa5.84□□□□□ -1.47
HMGB1P10-201ENST00000395823 KCNA3P22001 575 aa5.84□□□□□ -1.47
HMGB1P10-201ENST00000395823 CNTFP26441 200 aa5.84□□□□□ -1.47
HMGB1P10-201ENST00000395823 CST5P28325 142 aaPredicted RBP5.84□□□□□ -1.47
HMGB1P10-201ENST00000395823 SLC5A2P31639 672 aa5.84□□□□□ -1.47
HMGB1P10-201ENST00000395823 ADD2P35612 726 aa5.84□□□□□ -1.47
HMGB1P10-201ENST00000395823 DGKEP52429 567 aa5.84□□□□□ -1.47
HMGB1P10-201ENST00000395823 SEC24CP53992 1094 aa5.84□□□□□ -1.47
HMGB1P10-201ENST00000395823 PRKAA2P54646 552 aa5.84□□□□□ -1.47
HMGB1P10-201ENST00000395823 NHLH2Q02577 135 aa5.84□□□□□ -1.47
HMGB1P10-201ENST00000395823 KRT17Q04695 432 aa5.84□□□□□ -1.47
HMGB1P10-201ENST00000395823 MYO1EQ12965 1108 aa5.84□□□□□ -1.47
HMGB1P10-201ENST00000395823 MGAT5BQ3V5L5 792 aa5.84□□□□□ -1.47
HMGB1P10-201ENST00000395823 DCAF17Q5H9S7 520 aaPredicted RBP5.84□□□□□ -1.47
HMGB1P10-201ENST00000395823 INTS11Q5TA45 600 aaKnown RBP5.84□□□□□ -1.47
HMGB1P10-201ENST00000395823 MCTP1Q6DN14 999 aa5.84□□□□□ -1.47
HMGB1P10-201ENST00000395823 TCTN3Q6NUS6 607 aa5.84□□□□□ -1.47
HMGB1P10-201ENST00000395823 PCGF5Q86SE9 256 aa5.84□□□□□ -1.47
HMGB1P10-201ENST00000395823 LRRTM4Q86VH4 590 aa5.84□□□□□ -1.47
HMGB1P10-201ENST00000395823 Q8NA96 180 aa5.84□□□□□ -1.47
HMGB1P10-201ENST00000395823 NAXEQ8NCW5 288 aa5.84□□□□□ -1.47
HMGB1P10-201ENST00000395823 BHLHE22Q8NFJ8 381 aaPredicted RBP5.84□□□□□ -1.47
HMGB1P10-201ENST00000395823 OR56A1Q8NGH5 318 aa5.84□□□□□ -1.47
HMGB1P10-201ENST00000395823 SCAMP5Q8TAC9 235 aa5.84□□□□□ -1.47
HMGB1P10-201ENST00000395823 MPHOSPH9Q99550 1183 aa5.84□□□□□ -1.47
HMGB1P10-201ENST00000395823 TP63Q9H3D4 680 aaPredicted RBP5.84□□□□□ -1.47
HMGB1P10-201ENST00000395823 FAM83DQ9H4H8 585 aa5.84□□□□□ -1.47
HMGB1P10-201ENST00000395823 ZBTB26Q9HCK0 441 aa5.84□□□□□ -1.47
HMGB1P10-201ENST00000395823 VPS51Q9UID3 782 aa5.84□□□□□ -1.47
HMGB1P10-201ENST00000395823 HERC5Q9UII4 1024 aaKnown RBP5.84□□□□□ -1.47
HMGB1P10-201ENST00000395823 RAD54BQ9Y620 910 aa5.84□□□□□ -1.47
HMGB1P10-201ENST00000395823 SLC30A1Q9Y6M5 507 aa5.84□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 188.4 ms