RNA–Protein interactions for RNA: ENST00000394945.5

SPOCK1-202, Transcript of SPARC (osteonectin), cwcv and kazal like domains proteoglycan 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPOCK1, Length 4,846 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPOCK1-202ENST00000394945 PDPK2PQ6A1A2 396 aa16.17■□□□□ 0.18
SPOCK1-202ENST00000394945 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP16.17■□□□□ 0.18
SPOCK1-202ENST00000394945 RNF139Q8WU17 664 aa16.17■□□□□ 0.18
SPOCK1-202ENST00000394945 FAM84BQ96KN1 310 aaPredicted RBP16.17■□□□□ 0.18
SPOCK1-202ENST00000394945 LRMDAQ9H2I8 198 aa16.17■□□□□ 0.18
SPOCK1-202ENST00000394945 SARS2Q9NP81 518 aaKnown RBP16.17■□□□□ 0.18
SPOCK1-202ENST00000394945 GABBR1Q9UBS5 961 aa16.17■□□□□ 0.18
SPOCK1-202ENST00000394945 SRP68Q9UHB9 627 aaKnown RBP16.17■□□□□ 0.18
SPOCK1-202ENST00000394945 ADRA1DP25100 572 aa16.17■□□□□ 0.18
SPOCK1-202ENST00000394945 RPL5P46777 297 aaKnown RBP16.17■□□□□ 0.18
SPOCK1-202ENST00000394945 KYQ8NBH2 561 aa16.17■□□□□ 0.18
SPOCK1-202ENST00000394945 NSUN4Q96CB9 384 aaKnown RBP16.17■□□□□ 0.18
SPOCK1-202ENST00000394945 CTNNAL1Q9UBT7 734 aa16.17■□□□□ 0.18
SPOCK1-202ENST00000394945 TRPC5OSA6NMA1 111 aa16.17■□□□□ 0.18
SPOCK1-202ENST00000394945 MYO1GB0I1T2 1018 aa16.17■□□□□ 0.18
SPOCK1-202ENST00000394945 KBTBD12Q3ZCT8 623 aa16.17■□□□□ 0.18
SPOCK1-202ENST00000394945 C2CD6Q53TS8 623 aa16.17■□□□□ 0.18
SPOCK1-202ENST00000394945 ZNF677Q86XU0 584 aa16.17■□□□□ 0.18
SPOCK1-202ENST00000394945 TMEM139Q8IV31 216 aa16.17■□□□□ 0.18
SPOCK1-202ENST00000394945 DIS3LQ8TF46 1054 aaKnown RBP16.17■□□□□ 0.18
SPOCK1-202ENST00000394945 TMEM8AQ9HCN3 771 aa16.17■□□□□ 0.18
SPOCK1-202ENST00000394945 UBAP1Q9NZ09 502 aa16.17■□□□□ 0.18
SPOCK1-202ENST00000394945 WBP4O75554 376 aaKnown RBP16.16■□□□□ 0.18
SPOCK1-202ENST00000394945 GRK2P25098 689 aa16.16■□□□□ 0.18
SPOCK1-202ENST00000394945 SFNP31947 248 aa16.16■□□□□ 0.18
SPOCK1-202ENST00000394945 ACOT2P49753 483 aa16.16■□□□□ 0.18
SPOCK1-202ENST00000394945 MFSD4BQ5TF39 518 aa16.16■□□□□ 0.18
SPOCK1-202ENST00000394945 TNIP2Q8NFZ5 429 aa16.16■□□□□ 0.18
SPOCK1-202ENST00000394945 ZBED2Q9BTP6 218 aa16.16■□□□□ 0.18
SPOCK1-202ENST00000394945 AGPAT3Q9NRZ7 376 aa16.16■□□□□ 0.18
SPOCK1-202ENST00000394945 FAM217BQ9NTX9 383 aaPredicted RBP16.16■□□□□ 0.18
SPOCK1-202ENST00000394945 SLC39A10Q9ULF5 831 aa16.16■□□□□ 0.18
SPOCK1-202ENST00000394945 ZMYND8Q9ULU4 1186 aaPredicted RBP16.16■□□□□ 0.18
SPOCK1-202ENST00000394945 PPRC1Q5VV67 1664 aaKnown RBP16.16■□□□□ 0.18
SPOCK1-202ENST00000394945 LINC00854A0A1B0GVQ3 168 aa16.16■□□□□ 0.18
SPOCK1-202ENST00000394945 BBOX1O75936 387 aa16.16■□□□□ 0.18
SPOCK1-202ENST00000394945 MFN2O95140 757 aa16.16■□□□□ 0.18
SPOCK1-202ENST00000394945 RARAP10276 462 aa16.16■□□□□ 0.18
SPOCK1-202ENST00000394945 GCLCP48506 637 aaPredicted RBP16.16■□□□□ 0.18
SPOCK1-202ENST00000394945 GRM1Q13255 1194 aa16.16■□□□□ 0.18
SPOCK1-202ENST00000394945 LBRQ14739 615 aaKnown RBP16.16■□□□□ 0.18
SPOCK1-202ENST00000394945 NKX1-1Q15270 411 aaPredicted RBP16.16■□□□□ 0.18
SPOCK1-202ENST00000394945 RNF220Q5VTB9 566 aa16.16■□□□□ 0.18
SPOCK1-202ENST00000394945 KIAA0895Q8NCT3 520 aa16.16■□□□□ 0.18
SPOCK1-202ENST00000394945 PI4K2AQ9BTU6 479 aa16.16■□□□□ 0.18
SPOCK1-202ENST00000394945 RNPEPQ9H4A4 650 aa16.16■□□□□ 0.18
SPOCK1-202ENST00000394945 NOL6Q9H6R4 1146 aaKnown RBP16.16■□□□□ 0.18
SPOCK1-202ENST00000394945 LRRC4BQ9NT99 713 aa16.16■□□□□ 0.18
SPOCK1-202ENST00000394945 RRN3Q9NYV6 651 aa16.16■□□□□ 0.18
SPOCK1-202ENST00000394945 HACD3Q9P035 362 aa16.16■□□□□ 0.18
SPOCK1-202ENST00000394945 UBA6A0AVT1 1052 aaPredicted RBP16.16■□□□□ 0.18
SPOCK1-202ENST00000394945 RALBP11234 206 aa16.16■□□□□ 0.18
SPOCK1-202ENST00000394945 WDR72Q3MJ13 1102 aa16.16■□□□□ 0.18
SPOCK1-202ENST00000394945 SBK1Q52WX2 424 aa16.16■□□□□ 0.18
SPOCK1-202ENST00000394945 RSBN1Q5VWQ0 802 aaPredicted RBP16.16■□□□□ 0.18
SPOCK1-202ENST00000394945 EEPD1Q7L9B9 569 aa16.16■□□□□ 0.18
SPOCK1-202ENST00000394945 OR6Y1Q8NGX8 325 aa16.16■□□□□ 0.18
SPOCK1-202ENST00000394945 PTPRN2Q92932 1015 aa16.16■□□□□ 0.18
SPOCK1-202ENST00000394945 USP13Q92995 863 aaPredicted RBP16.16■□□□□ 0.18
SPOCK1-202ENST00000394945 ZNF669Q96BR6 464 aaPredicted RBP16.16■□□□□ 0.18
SPOCK1-202ENST00000394945 LENG1Q96BZ8 264 aaPredicted RBP16.16■□□□□ 0.18
SPOCK1-202ENST00000394945 POLR3FQ9H1D9 316 aaPredicted RBP16.16■□□□□ 0.18
SPOCK1-202ENST00000394945 LMTK2Q8IWU2 1503 aa16.16■□□□□ 0.18
SPOCK1-202ENST00000394945 SALL1Q9NSC2 1324 aa16.16■□□□□ 0.18
SPOCK1-202ENST00000394945 DPPA5A6NC42 116 aa16.16■□□□□ 0.18
SPOCK1-202ENST00000394945 DNM1LO00429 736 aa16.16■□□□□ 0.18
SPOCK1-202ENST00000394945 RGS5O15539 181 aa16.16■□□□□ 0.18
SPOCK1-202ENST00000394945 AP3M2P53677 418 aa16.16■□□□□ 0.18
SPOCK1-202ENST00000394945 RPL10AP62906 217 aaKnown RBP16.16■□□□□ 0.18
SPOCK1-202ENST00000394945 LACTB2Q53H82 288 aaPredicted RBP16.16■□□□□ 0.18
SPOCK1-202ENST00000394945 TAGAPQ8N103 731 aa16.16■□□□□ 0.18
SPOCK1-202ENST00000394945 STKLD1Q8NE28 680 aa16.16■□□□□ 0.18
SPOCK1-202ENST00000394945 DCDC2Q9UHG0 476 aa16.16■□□□□ 0.18
SPOCK1-202ENST00000394945 RIMBP3CA6NJZ7 1639 aa16.16■□□□□ 0.18
SPOCK1-202ENST00000394945 RIMBP3BA6NNM3 1639 aa16.16■□□□□ 0.18
SPOCK1-202ENST00000394945 RIMBP3Q9UFD9 1639 aa16.16■□□□□ 0.18
SPOCK1-202ENST00000394945 PYGMP11217 842 aa16.15■□□□□ 0.18
SPOCK1-202ENST00000394945 PPARGP37231 505 aaPredicted RBP16.15■□□□□ 0.18
SPOCK1-202ENST00000394945 CACNB3P54284 484 aa16.15■□□□□ 0.18
SPOCK1-202ENST00000394945 NCKAP1LP55160 1127 aa16.15■□□□□ 0.18
SPOCK1-202ENST00000394945 RRP1BQ14684 758 aaKnown RBP16.15■□□□□ 0.18
SPOCK1-202ENST00000394945 SF3B3Q15393 1217 aaKnown RBP16.15■□□□□ 0.18
SPOCK1-202ENST00000394945 MAPK11Q15759 364 aa16.15■□□□□ 0.18
SPOCK1-202ENST00000394945 SGF29Q96ES7 293 aa16.15■□□□□ 0.18
SPOCK1-202ENST00000394945 TMEM121Q9BTD3 319 aa16.15■□□□□ 0.18
SPOCK1-202ENST00000394945 COPG2Q9UBF2 871 aa16.15■□□□□ 0.18
SPOCK1-202ENST00000394945 FAM237AA0A1B0GTK4 181 aa16.15■□□□□ 0.18
SPOCK1-202ENST00000394945 HLA-DRAP01903 254 aa16.15■□□□□ 0.18
SPOCK1-202ENST00000394945 ZNF543Q08ER8 600 aa16.15■□□□□ 0.18
SPOCK1-202ENST00000394945 NCOA4Q13772 614 aa16.15■□□□□ 0.18
SPOCK1-202ENST00000394945 SWSAP1Q6NVH7 229 aa16.15■□□□□ 0.18
SPOCK1-202ENST00000394945 CELF1Q92879 486 aaKnown RBP16.15■□□□□ 0.18
SPOCK1-202ENST00000394945 SAC3D1A6NKF1 404 aa16.15■□□□□ 0.18
SPOCK1-202ENST00000394945 ASNA1O43681 348 aa16.15■□□□□ 0.18
SPOCK1-202ENST00000394945 AKAP3O75969 853 aa16.15■□□□□ 0.18
SPOCK1-202ENST00000394945 SKIV2L2P42285 1042 aaKnown RBP16.15■□□□□ 0.18
SPOCK1-202ENST00000394945 ZNF662Q6ZS27 426 aa16.15■□□□□ 0.18
SPOCK1-202ENST00000394945 FBXL16Q8N461 479 aa16.15■□□□□ 0.18
SPOCK1-202ENST00000394945 OSBPL7Q9BZF2 842 aa16.15■□□□□ 0.18
SPOCK1-202ENST00000394945 RPL26L1Q9UNX3 145 aaKnown RBP16.15■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms