RNA–Protein interactions for RNA: ENST00000389416.8

PTPRN2-202, Transcript of protein tyrosine phosphatase, receptor type N2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRN2, Length 4,692 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN2-202ENST00000389416 ZNF449Q6P9G9 518 aa13.72□□□□□ -0.21
PTPRN2-202ENST00000389416 MAML3Q96JK9 1138 aa13.72□□□□□ -0.21
PTPRN2-202ENST00000389416 ZCCHC17Q9NP64 241 aaKnown RBP13.72□□□□□ -0.21
PTPRN2-202ENST00000389416 SNED1Q8TER0 1413 aa13.72□□□□□ -0.21
PTPRN2-202ENST00000389416 C3orf70A6NLC5 250 aaPredicted RBP13.72□□□□□ -0.21
PTPRN2-202ENST00000389416 ZNF862O60290 1169 aa13.72□□□□□ -0.21
PTPRN2-202ENST00000389416 TKTL1P51854 596 aa13.72□□□□□ -0.21
PTPRN2-202ENST00000389416 CLEC16AQ2KHT3 1053 aa13.72□□□□□ -0.21
PTPRN2-202ENST00000389416 YAF2Q8IY57 180 aa13.72□□□□□ -0.21
PTPRN2-202ENST00000389416 OR5B17Q8NGF7 314 aa13.72□□□□□ -0.21
PTPRN2-202ENST00000389416 ARHGEF26Q96DR7 871 aa13.72□□□□□ -0.21
PTPRN2-202ENST00000389416 THOC1Q96FV9 657 aaKnown RBP13.72□□□□□ -0.21
PTPRN2-202ENST00000389416 ACO2Q99798 780 aaKnown RBP13.72□□□□□ -0.21
PTPRN2-202ENST00000389416 SIK3Q9Y2K2 1263 aa13.72□□□□□ -0.21
PTPRN2-202ENST00000389416 CKMP06732 381 aa13.72□□□□□ -0.21
PTPRN2-202ENST00000389416 PPARGP37231 505 aaPredicted RBP13.72□□□□□ -0.21
PTPRN2-202ENST00000389416 KPNA2P52292 529 aaKnown RBP13.72□□□□□ -0.21
PTPRN2-202ENST00000389416 PDCLQ13371 301 aa13.72□□□□□ -0.21
PTPRN2-202ENST00000389416 NUGGCQ68CJ6 796 aa13.72□□□□□ -0.21
PTPRN2-202ENST00000389416 ALKBH8Q96BT7 664 aaKnown RBP13.72□□□□□ -0.21
PTPRN2-202ENST00000389416 RPRD1AQ96P16 312 aaPredicted RBP13.72□□□□□ -0.21
PTPRN2-202ENST00000389416 MUC3BQ9H195 1237 aa13.72□□□□□ -0.21
PTPRN2-202ENST00000389416 A0A087WUV0 522 aaPredicted RBP13.71□□□□□ -0.21
PTPRN2-202ENST00000389416 CD52P31358 61 aa13.71□□□□□ -0.21
PTPRN2-202ENST00000389416 CARSP49589 748 aaKnown RBP13.71□□□□□ -0.21
PTPRN2-202ENST00000389416 NOP9Q86U38 636 aaKnown RBP13.71□□□□□ -0.21
PTPRN2-202ENST00000389416 FAM71DQ8N9W8 422 aa13.71□□□□□ -0.21
PTPRN2-202ENST00000389416 TRAIPQ9BWF2 469 aa13.71□□□□□ -0.21
PTPRN2-202ENST00000389416 KCTD10Q9H3F6 313 aa13.71□□□□□ -0.21
PTPRN2-202ENST00000389416 DSEQ9UL01 958 aa13.71□□□□□ -0.21
PTPRN2-202ENST00000389416 ARHGAP42A6NI28 874 aa13.71□□□□□ -0.21
PTPRN2-202ENST00000389416 H7C4K7 107 aa13.71□□□□□ -0.21
PTPRN2-202ENST00000389416 PAPOLAP51003 745 aaKnown RBP13.71□□□□□ -0.21
PTPRN2-202ENST00000389416 MRPS6P82932 125 aaKnown RBP13.71□□□□□ -0.21
PTPRN2-202ENST00000389416 BST2Q10589 180 aaKnown RBP13.71□□□□□ -0.21
PTPRN2-202ENST00000389416 KLHL38Q2WGJ6 581 aa13.71□□□□□ -0.21
PTPRN2-202ENST00000389416 CCDC38Q502W7 563 aa13.71□□□□□ -0.21
PTPRN2-202ENST00000389416 TRIM42Q8IWZ5 723 aa13.71□□□□□ -0.21
PTPRN2-202ENST00000389416 ARHGAP24Q8N264 748 aa13.71□□□□□ -0.21
PTPRN2-202ENST00000389416 SLC2A14Q8TDB8 520 aa13.71□□□□□ -0.21
PTPRN2-202ENST00000389416 EDEM1Q92611 657 aa13.71□□□□□ -0.21
PTPRN2-202ENST00000389416 LPPQ93052 612 aa13.71□□□□□ -0.21
PTPRN2-202ENST00000389416 CNOT10Q9H9A5 744 aaKnown RBP13.71□□□□□ -0.21
PTPRN2-202ENST00000389416 HOXC6P09630 235 aa13.71□□□□□ -0.22
PTPRN2-202ENST00000389416 ARF4P18085 180 aaPredicted RBP13.71□□□□□ -0.22
PTPRN2-202ENST00000389416 IFT88Q13099 833 aa13.71□□□□□ -0.22
PTPRN2-202ENST00000389416 RCN2Q14257 317 aa13.71□□□□□ -0.22
PTPRN2-202ENST00000389416 PCSK7Q16549 785 aa13.71□□□□□ -0.22
PTPRN2-202ENST00000389416 SENP8Q96LD8 212 aa13.71□□□□□ -0.22
PTPRN2-202ENST00000389416 ST3GAL5Q9UNP4 418 aa13.71□□□□□ -0.22
PTPRN2-202ENST00000389416 UBA6A0AVT1 1052 aaPredicted RBP13.7□□□□□ -0.22
PTPRN2-202ENST00000389416 TARSL2A2RTX5 802 aaKnown RBP13.7□□□□□ -0.22
PTPRN2-202ENST00000389416 POU5F1BQ06416 359 aa13.7□□□□□ -0.22
PTPRN2-202ENST00000389416 EFEMP1Q12805 493 aa13.7□□□□□ -0.22
PTPRN2-202ENST00000389416 PDK1Q15118 436 aa13.7□□□□□ -0.22
PTPRN2-202ENST00000389416 MIIPQ5JXC2 388 aa13.7□□□□□ -0.22
PTPRN2-202ENST00000389416 FAXCQ5TGI0 409 aa13.7□□□□□ -0.22
PTPRN2-202ENST00000389416 PHLDB3Q6NSJ2 640 aa13.7□□□□□ -0.22
PTPRN2-202ENST00000389416 MCOLN2Q8IZK6 566 aa13.7□□□□□ -0.22
PTPRN2-202ENST00000389416 CCDC197Q8NCU1 140 aa13.7□□□□□ -0.22
PTPRN2-202ENST00000389416 CNPY3Q9BT09 278 aa13.7□□□□□ -0.22
PTPRN2-202ENST00000389416 TSPYL2Q9H2G4 693 aaPredicted RBP13.7□□□□□ -0.22
PTPRN2-202ENST00000389416 CNTNAP1P78357 1384 aa13.7□□□□□ -0.22
PTPRN2-202ENST00000389416 KDM3BQ7LBC6 1761 aa13.7□□□□□ -0.22
PTPRN2-202ENST00000389416 LSM8O95777 96 aaKnown RBP13.7□□□□□ -0.22
PTPRN2-202ENST00000389416 MMP3P08254 477 aa13.7□□□□□ -0.22
PTPRN2-202ENST00000389416 BRAFP15056 766 aa13.7□□□□□ -0.22
PTPRN2-202ENST00000389416 ETFBP38117 255 aa13.7□□□□□ -0.22
PTPRN2-202ENST00000389416 RASSF2P50749 326 aa13.7□□□□□ -0.22
PTPRN2-202ENST00000389416 ELAVL2Q12926 359 aaKnown RBP13.7□□□□□ -0.22
PTPRN2-202ENST00000389416 FAM47EQ6ZV65 393 aa13.7□□□□□ -0.22
PTPRN2-202ENST00000389416 SCUBE3Q8IX30 993 aa13.7□□□□□ -0.22
PTPRN2-202ENST00000389416 SLC13A1Q9BZW2 595 aa13.7□□□□□ -0.22
PTPRN2-202ENST00000389416 SMYD3Q9H7B4 428 aa13.7□□□□□ -0.22
PTPRN2-202ENST00000389416 CYP4F11Q9HBI6 524 aa13.7□□□□□ -0.22
PTPRN2-202ENST00000389416 ENTPD7Q9NQZ7 604 aa13.7□□□□□ -0.22
PTPRN2-202ENST00000389416 ZFATQ9P243 1243 aa13.7□□□□□ -0.22
PTPRN2-202ENST00000389416 FAM8A1Q9UBU6 413 aa13.7□□□□□ -0.22
PTPRN2-202ENST00000389416 CNTNAP2Q9UHC6 1331 aa13.7□□□□□ -0.22
PTPRN2-202ENST00000389416 TBX2Q13207 712 aaPredicted RBP13.7□□□□□ -0.22
PTPRN2-202ENST00000389416 SLC12A1Q13621 1099 aa13.7□□□□□ -0.22
PTPRN2-202ENST00000389416 KLC3Q6P597 504 aa13.7□□□□□ -0.22
PTPRN2-202ENST00000389416 PPFIBP2Q8ND30 876 aa13.7□□□□□ -0.22
PTPRN2-202ENST00000389416 SPATA20Q8TB22 786 aa13.7□□□□□ -0.22
PTPRN2-202ENST00000389416 CATSPERBQ9H7T0 1116 aa13.7□□□□□ -0.22
PTPRN2-202ENST00000389416 NEU2Q9Y3R4 380 aa13.7□□□□□ -0.22
PTPRN2-202ENST00000389416 GTF3C5Q9Y5Q8 519 aaPredicted RBP13.7□□□□□ -0.22
PTPRN2-202ENST00000389416 PHF20L1A8MW92 1017 aa13.7□□□□□ -0.22
PTPRN2-202ENST00000389416 PROSCO94903 275 aa13.7□□□□□ -0.22
PTPRN2-202ENST00000389416 GJB6O95452 261 aa13.7□□□□□ -0.22
PTPRN2-202ENST00000389416 YBX3P16989 372 aaKnown RBP eCLIP13.7□□□□□ -0.226e-7■■■■■ 40.5
PTPRN2-202ENST00000389416 GRK4P32298 578 aa13.7□□□□□ -0.22
PTPRN2-202ENST00000389416 TSR3Q9UJK0 312 aaKnown RBP13.7□□□□□ -0.22
PTPRN2-202ENST00000389416 CASZ1Q86V15 1759 aa13.7□□□□□ -0.22
PTPRN2-202ENST00000389416 ARFGEF2Q9Y6D5 1785 aa13.7□□□□□ -0.22
PTPRN2-202ENST00000389416 RPL10AP62906 217 aaKnown RBP13.69□□□□□ -0.22
PTPRN2-202ENST00000389416 ADIGQ0VDE8 80 aa13.69□□□□□ -0.22
PTPRN2-202ENST00000389416 KCNMA1Q12791 1236 aa13.69□□□□□ -0.22
PTPRN2-202ENST00000389416 SLC9A9Q8IVB4 645 aa13.69□□□□□ -0.22
PTPRN2-202ENST00000389416 BSNDQ8WZ55 320 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms