RNA–Protein interactions for RNA: ENST00000380285.7

SNX1-202, Transcript of sorting nexin 1, humanhuman

TSL 1 (best)

Gene SNX1, Length 8,119 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-202ENST00000380285 VCPP55072 806 aaKnown RBP9.95□□□□□ -0.82
SNX1-202ENST00000380285 ERVK-24P63145 666 aa9.95□□□□□ -0.82
SNX1-202ENST00000380285 CHRNB3Q05901 458 aa9.95□□□□□ -0.82
SNX1-202ENST00000380285 SLC34A1Q06495 639 aa9.95□□□□□ -0.82
SNX1-202ENST00000380285 WDR72Q3MJ13 1102 aa9.95□□□□□ -0.82
SNX1-202ENST00000380285 SPDYAQ5MJ70 313 aa9.95□□□□□ -0.82
SNX1-202ENST00000380285 C16orf86Q6ZW13 317 aa9.95□□□□□ -0.82
SNX1-202ENST00000380285 NYAP2Q9P242 653 aa9.95□□□□□ -0.82
SNX1-202ENST00000380285 VTI1BQ9UEU0 232 aa9.95□□□□□ -0.82
SNX1-202ENST00000380285 SHOC2Q9UQ13 582 aa9.95□□□□□ -0.82
SNX1-202ENST00000380285 STARD13Q9Y3M8 1113 aa9.95□□□□□ -0.82
SNX1-202ENST00000380285 MYO10Q9HD67 2058 aa9.95□□□□□ -0.82
SNX1-202ENST00000380285 CCNG2Q16589 344 aa9.95□□□□□ -0.82
SNX1-202ENST00000380285 SCN4BQ8IWT1 228 aa9.95□□□□□ -0.82
SNX1-202ENST00000380285 ZNF786Q8N393 782 aa9.95□□□□□ -0.82
SNX1-202ENST00000380285 DDX17Q92841 729 aaKnown RBP9.95□□□□□ -0.82
SNX1-202ENST00000380285 MRPL48Q96GC5 212 aaKnown RBP9.95□□□□□ -0.82
SNX1-202ENST00000380285 RAD54BQ9Y620 910 aa9.95□□□□□ -0.82
SNX1-202ENST00000380285 PNMA8CA0A1B0GUJ8 204 aa9.95□□□□□ -0.82
SNX1-202ENST00000380285 EIF4E1BA6NMX2 242 aaKnown RBP9.95□□□□□ -0.82
SNX1-202ENST00000380285 CACHD1Q5VU97 1274 aa9.95□□□□□ -0.82
SNX1-202ENST00000380285 CCDC60Q8IWA6 550 aaPredicted RBP9.95□□□□□ -0.82
SNX1-202ENST00000380285 HAO1Q9UJM8 370 aa9.95□□□□□ -0.82
SNX1-202ENST00000380285 TRIM24O15164 1050 aa9.95□□□□□ -0.82
SNX1-202ENST00000380285 ADORA2BP29275 332 aa9.95□□□□□ -0.82
SNX1-202ENST00000380285 KCNMA1Q12791 1236 aa9.95□□□□□ -0.82
SNX1-202ENST00000380285 RASA2Q15283 850 aa9.95□□□□□ -0.82
SNX1-202ENST00000380285 HLFQ16534 295 aa9.95□□□□□ -0.82
SNX1-202ENST00000380285 PKN3Q6P5Z2 889 aa9.95□□□□□ -0.82
SNX1-202ENST00000380285 AGBL1Q96MI9 1066 aa9.95□□□□□ -0.82
SNX1-202ENST00000380285 SDR42E2A6NKP2 422 aa9.95□□□□□ -0.82
SNX1-202ENST00000380285 PTGER2P43116 358 aa9.95□□□□□ -0.82
SNX1-202ENST00000380285 MAPRE1Q15691 268 aaKnown RBP9.95□□□□□ -0.82
SNX1-202ENST00000380285 ZNF483Q8TF39 744 aaPredicted RBP9.95□□□□□ -0.82
SNX1-202ENST00000380285 AFG1LQ8WV93 481 aa9.95□□□□□ -0.82
SNX1-202ENST00000380285 RMND5AQ9H871 391 aa9.95□□□□□ -0.82
SNX1-202ENST00000380285 EIF3LQ9Y262 564 aaKnown RBP9.95□□□□□ -0.82
SNX1-202ENST00000380285 AP3M1Q9Y2T2 418 aa9.95□□□□□ -0.82
SNX1-202ENST00000380285 AAR2Q9Y312 384 aaKnown RBP9.95□□□□□ -0.82
SNX1-202ENST00000380285 FKBP9O95302 570 aa9.95□□□□□ -0.82
SNX1-202ENST00000380285 DLGAP3O95886 979 aa9.95□□□□□ -0.82
SNX1-202ENST00000380285 ATP6V1B1P15313 513 aa9.95□□□□□ -0.82
SNX1-202ENST00000380285 RAD23AP54725 363 aa9.95□□□□□ -0.82
SNX1-202ENST00000380285 NAB1Q13506 487 aa9.95□□□□□ -0.82
SNX1-202ENST00000380285 SNX17Q15036 470 aa9.95□□□□□ -0.82
SNX1-202ENST00000380285 CCDC153Q494R4 210 aa9.95□□□□□ -0.82
SNX1-202ENST00000380285 FKBP9P1Q75LS8 142 aa9.95□□□□□ -0.82
SNX1-202ENST00000380285 SLC22A9Q8IVM8 553 aa9.95□□□□□ -0.82
SNX1-202ENST00000380285 POP5Q969H6 163 aaKnown RBP9.95□□□□□ -0.82
SNX1-202ENST00000380285 FAM49AQ9H0Q0 323 aaPredicted RBP9.95□□□□□ -0.82
SNX1-202ENST00000380285 ATAD3AQ9NVI7 634 aa9.95□□□□□ -0.82
SNX1-202ENST00000380285 BCS1LQ9Y276 419 aa9.95□□□□□ -0.82
SNX1-202ENST00000380285 MYO1GB0I1T2 1018 aa9.94□□□□□ -0.82
SNX1-202ENST00000380285 SLC9A1P19634 815 aa9.94□□□□□ -0.82
SNX1-202ENST00000380285 PNPLA4P41247 253 aa9.94□□□□□ -0.82
SNX1-202ENST00000380285 PTPAQ15257 358 aa9.94□□□□□ -0.82
SNX1-202ENST00000380285 NT5DC1Q5TFE4 455 aa9.94□□□□□ -0.82
SNX1-202ENST00000380285 ARHGAP22Q7Z5H3 698 aa9.94□□□□□ -0.82
SNX1-202ENST00000380285 SLC26A11Q86WA9 606 aa9.94□□□□□ -0.82
SNX1-202ENST00000380285 MDM1Q8TC05 714 aa9.94□□□□□ -0.82
SNX1-202ENST00000380285 ATXN7L3BQ96GX2 97 aa9.94□□□□□ -0.82
SNX1-202ENST00000380285 PTPRUQ92729 1446 aa9.94□□□□□ -0.82
SNX1-202ENST00000380285 DLG3Q92796 817 aa9.94□□□□□ -0.82
SNX1-202ENST00000380285 VPS50Q96JG6 964 aa9.94□□□□□ -0.82
SNX1-202ENST00000380285 ANKZF1Q9H8Y5 726 aa9.94□□□□□ -0.82
SNX1-202ENST00000380285 CHD1O14646 1710 aa9.94□□□□□ -0.82
SNX1-202ENST00000380285 MAGEB16A2A368 324 aa9.94□□□□□ -0.82
SNX1-202ENST00000380285 PON1P27169 355 aa9.94□□□□□ -0.82
SNX1-202ENST00000380285 ARPP19P56211 112 aa9.94□□□□□ -0.82
SNX1-202ENST00000380285 NOP9Q86U38 636 aaKnown RBP9.94□□□□□ -0.82
SNX1-202ENST00000380285 SVOPQ8N4V2 548 aa9.94□□□□□ -0.82
SNX1-202ENST00000380285 ABHD8Q96I13 439 aa9.94□□□□□ -0.82
SNX1-202ENST00000380285 DRG1Q9Y295 367 aaKnown RBP9.94□□□□□ -0.82
SNX1-202ENST00000380285 SPDYE5A6NIY4 337 aa9.94□□□□□ -0.82
SNX1-202ENST00000380285 SUPT3HB4E1H0 165 aa9.94□□□□□ -0.82
SNX1-202ENST00000380285 LCP1P13796 627 aa9.94□□□□□ -0.82
SNX1-202ENST00000380285 ITGA9Q13797 1035 aa9.94□□□□□ -0.82
SNX1-202ENST00000380285 SPDYE7PQ495Y7 208 aa9.94□□□□□ -0.82
SNX1-202ENST00000380285 ZBTB10Q96DT7 871 aa9.94□□□□□ -0.82
SNX1-202ENST00000380285 PGM2Q96G03 612 aa9.94□□□□□ -0.82
SNX1-202ENST00000380285 FAM111AQ96PZ2 611 aa9.94□□□□□ -0.82
SNX1-202ENST00000380285 BTBD10Q9BSF8 475 aa9.94□□□□□ -0.82
SNX1-202ENST00000380285 KBTBD4Q9NVX7 518 aa9.94□□□□□ -0.82
SNX1-202ENST00000380285 CTDNEP1O95476 244 aa9.94□□□□□ -0.82
SNX1-202ENST00000380285 RBP1P09455 135 aa9.94□□□□□ -0.82
SNX1-202ENST00000380285 SV2CQ496J9 727 aa9.94□□□□□ -0.82
SNX1-202ENST00000380285 TRIM65Q6PJ69 517 aa9.94□□□□□ -0.82
SNX1-202ENST00000380285 FAM210AQ96ND0 272 aa9.94□□□□□ -0.82
SNX1-202ENST00000380285 PDZK1P1A8MUH7 402 aa9.94□□□□□ -0.82
SNX1-202ENST00000380285 HLA-DRAP01903 254 aa9.94□□□□□ -0.82
SNX1-202ENST00000380285 SLC2A3P11169 496 aa9.94□□□□□ -0.82
SNX1-202ENST00000380285 ST13P50502 369 aaKnown RBP9.94□□□□□ -0.82
SNX1-202ENST00000380285 VEPH1Q14D04 833 aa9.94□□□□□ -0.82
SNX1-202ENST00000380285 TRIP4Q15650 581 aaPredicted RBP9.94□□□□□ -0.82
SNX1-202ENST00000380285 LDHDQ86WU2 507 aa9.94□□□□□ -0.82
SNX1-202ENST00000380285 SPATA33Q96N06 139 aa9.94□□□□□ -0.82
SNX1-202ENST00000380285 RAVER2Q9HCJ3 691 aaKnown RBP9.94□□□□□ -0.82
SNX1-202ENST00000380285 CFAP99D6REC4 459 aa9.93□□□□□ -0.82
SNX1-202ENST00000380285 PIK3CDO00329 1044 aa9.93□□□□□ -0.82
SNX1-202ENST00000380285 PRPF4O43172 522 aaKnown RBP eCLIP9.93□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 65.6 ms