RNA–Protein interactions for RNA: ENST00000378060.8

VPS36-201, Transcript of vacuolar protein sorting 36 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS36, Length 4,417 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-201ENST00000378060 ASB14A6NK59 587 aa8.75□□□□□ -1.01
VPS36-201ENST00000378060 C19orf81C9J6K1 198 aa8.75□□□□□ -1.01
VPS36-201ENST00000378060 FSBPO95073 299 aa8.75□□□□□ -1.01
VPS36-201ENST00000378060 ENO3P13929 434 aaPredicted RBP8.75□□□□□ -1.01
VPS36-201ENST00000378060 CYP11B1P15538 503 aa8.75□□□□□ -1.01
VPS36-201ENST00000378060 TNFRSF8P28908 595 aa8.75□□□□□ -1.01
VPS36-201ENST00000378060 ADORA2BP29275 332 aa8.75□□□□□ -1.01
VPS36-201ENST00000378060 CUL2Q13617 745 aa8.75□□□□□ -1.01
VPS36-201ENST00000378060 ZNF720Q7Z2F6 126 aa8.75□□□□□ -1.01
VPS36-201ENST00000378060 TMC3Q7Z5M5 1100 aa8.75□□□□□ -1.01
VPS36-201ENST00000378060 PRPF39Q86UA1 669 aaKnown RBP8.75□□□□□ -1.01
VPS36-201ENST00000378060 C1orf131Q8NDD1 294 aaKnown RBP8.75□□□□□ -1.01
VPS36-201ENST00000378060 TMEM143Q96AN5 459 aa8.75□□□□□ -1.01
VPS36-201ENST00000378060 KLF6Q99612 283 aaPredicted RBP8.75□□□□□ -1.01
VPS36-201ENST00000378060 NT5C1AQ9BXI3 368 aa8.75□□□□□ -1.01
VPS36-201ENST00000378060 LTBP3Q9NS15 1303 aa8.75□□□□□ -1.01
VPS36-201ENST00000378060 GAS2O43903 313 aaKnown RBP8.74□□□□□ -1.01
VPS36-201ENST00000378060 PROSCO94903 275 aa8.74□□□□□ -1.01
VPS36-201ENST00000378060 UBOX5O94941 541 aa8.74□□□□□ -1.01
VPS36-201ENST00000378060 VIL1P09327 827 aaKnown RBP8.74□□□□□ -1.01
VPS36-201ENST00000378060 MYL2P10916 166 aa8.74□□□□□ -1.01
VPS36-201ENST00000378060 GPD1P21695 349 aa8.74□□□□□ -1.01
VPS36-201ENST00000378060 SSTR3P32745 418 aaPredicted RBP8.74□□□□□ -1.01
VPS36-201ENST00000378060 IFNA8P32881 189 aa8.74□□□□□ -1.01
VPS36-201ENST00000378060 CTCFP49711 727 aaPredicted RBP8.74□□□□□ -1.01
VPS36-201ENST00000378060 COPAP53621 1224 aa8.74□□□□□ -1.01
VPS36-201ENST00000378060 PRKCEQ02156 737 aa8.74□□□□□ -1.01
VPS36-201ENST00000378060 KCNMA1Q12791 1236 aa8.74□□□□□ -1.01
VPS36-201ENST00000378060 NFIAQ12857 509 aa8.74□□□□□ -1.01
VPS36-201ENST00000378060 NME3Q13232 169 aa8.74□□□□□ -1.01
VPS36-201ENST00000378060 BIRC2Q13490 618 aa8.74□□□□□ -1.01
VPS36-201ENST00000378060 CYLC2Q14093 348 aaPredicted RBP8.74□□□□□ -1.01
VPS36-201ENST00000378060 CYTH1Q15438 398 aa8.74□□□□□ -1.01
VPS36-201ENST00000378060 IMPG1Q17R60 797 aa8.74□□□□□ -1.01
VPS36-201ENST00000378060 IER5Q5VY09 327 aa8.74□□□□□ -1.01
VPS36-201ENST00000378060 CD302Q8IX05 232 aa8.74□□□□□ -1.01
VPS36-201ENST00000378060 ZFPM1Q8IX07 1006 aa8.74□□□□□ -1.01
VPS36-201ENST00000378060 PPHLN1Q8NEY8 458 aaKnown RBP8.74□□□□□ -1.01
VPS36-201ENST00000378060 RBM46Q8TBY0 533 aaKnown RBP8.74□□□□□ -1.01
VPS36-201ENST00000378060 PRMT6Q96LA8 375 aaPredicted RBP8.74□□□□□ -1.01
VPS36-201ENST00000378060 MAP3K20Q9NYL2 800 aaKnown RBP8.74□□□□□ -1.01
VPS36-201ENST00000378060 BLOC1S6Q9UL45 172 aa8.74□□□□□ -1.01
VPS36-201ENST00000378060 PCDHGC5Q9Y5F6 944 aa8.74□□□□□ -1.01
VPS36-201ENST00000378060 BAZ2BQ9UIF8 2168 aaKnown RBP8.74□□□□□ -1.01
VPS36-201ENST00000378060 SGPL1O95470 568 aa8.74□□□□□ -1.01
VPS36-201ENST00000378060 HNRNPCP07910 306 aaKnown RBP eCLIP8.74□□□□□ -1.01
VPS36-201ENST00000378060 CYP2C8P10632 490 aa8.74□□□□□ -1.01
VPS36-201ENST00000378060 CALB2P22676 271 aa8.74□□□□□ -1.01
VPS36-201ENST00000378060 TARSP26639 723 aaKnown RBP8.74□□□□□ -1.01
VPS36-201ENST00000378060 USP10Q14694 798 aaKnown RBP8.74□□□□□ -1.01
VPS36-201ENST00000378060 TMEM132DQ14C87 1099 aa8.74□□□□□ -1.01
VPS36-201ENST00000378060 Q4G0T1 1027 aa8.74□□□□□ -1.01
VPS36-201ENST00000378060 TFDP3Q5H9I0 405 aa8.74□□□□□ -1.01
VPS36-201ENST00000378060 MICALL2Q8IY33 904 aa8.74□□□□□ -1.01
VPS36-201ENST00000378060 CALML6Q8TD86 181 aa8.74□□□□□ -1.01
VPS36-201ENST00000378060 SLC10A4Q96EP9 437 aa8.74□□□□□ -1.01
VPS36-201ENST00000378060 HIC2Q96JB3 615 aa8.74□□□□□ -1.01
VPS36-201ENST00000378060 CLMNQ96JQ2 1002 aa8.74□□□□□ -1.01
VPS36-201ENST00000378060 SMARCAD1Q9H4L7 1026 aa8.74□□□□□ -1.01
VPS36-201ENST00000378060 LRFN2Q9ULH4 789 aa8.74□□□□□ -1.01
VPS36-201ENST00000378060 TMEM247A6NEH6 219 aa8.74□□□□□ -1.01
VPS36-201ENST00000378060 RSPH10B2B2RC85 870 aa8.74□□□□□ -1.01
VPS36-201ENST00000378060 RSPH10BP0C881 870 aa8.74□□□□□ -1.01
VPS36-201ENST00000378060 SERPINB10P48595 397 aa8.74□□□□□ -1.01
VPS36-201ENST00000378060 ERVK-9P63128 1117 aa8.74□□□□□ -1.01
VPS36-201ENST00000378060 CHI3L2Q15782 390 aa8.74□□□□□ -1.01
VPS36-201ENST00000378060 ADRM1Q16186 407 aa8.74□□□□□ -1.01
VPS36-201ENST00000378060 GPRASP2Q96D09 838 aa8.74□□□□□ -1.01
VPS36-201ENST00000378060 ZMAT2Q96NC0 199 aaKnown RBP8.74□□□□□ -1.01
VPS36-201ENST00000378060 SEMA4AQ9H3S1 761 aa8.74□□□□□ -1.01
VPS36-201ENST00000378060 OSGEPQ9NPF4 335 aa8.74□□□□□ -1.01
VPS36-201ENST00000378060 DDX4Q9NQI0 724 aaKnown RBP8.74□□□□□ -1.01
VPS36-201ENST00000378060 PRMT7Q9NVM4 692 aaPredicted RBP8.74□□□□□ -1.01
VPS36-201ENST00000378060 TM9SF1O15321 606 aa8.74□□□□□ -1.01
VPS36-201ENST00000378060 MAPTP10636 758 aaKnown RBP8.74□□□□□ -1.01
VPS36-201ENST00000378060 PTPN4P29074 926 aa8.74□□□□□ -1.01
VPS36-201ENST00000378060 ZNF844Q08AG5 666 aa8.74□□□□□ -1.01
VPS36-201ENST00000378060 RCN1Q15293 331 aa8.74□□□□□ -1.01
VPS36-201ENST00000378060 LRRC36Q1X8D7 754 aa8.74□□□□□ -1.01
VPS36-201ENST00000378060 PLA2G4FQ68DD2 849 aa8.74□□□□□ -1.01
VPS36-201ENST00000378060 APOBEC3HQ6NTF7 200 aaKnown RBP8.74□□□□□ -1.01
VPS36-201ENST00000378060 MREGQ8N565 214 aa8.74□□□□□ -1.01
VPS36-201ENST00000378060 ZNF507Q8TCN5 953 aa8.74□□□□□ -1.01
VPS36-201ENST00000378060 TEKT4Q8WW24 435 aa8.74□□□□□ -1.01
VPS36-201ENST00000378060 NAF1Q96HR8 494 aaKnown RBP8.74□□□□□ -1.01
VPS36-201ENST00000378060 GMLQ99445 158 aa8.74□□□□□ -1.01
VPS36-201ENST00000378060 CCDC90BQ9GZT6 254 aa8.74□□□□□ -1.01
VPS36-201ENST00000378060 SP110Q9HB58 689 aa8.74□□□□□ -1.01
VPS36-201ENST00000378060 IL1RAPL1Q9NZN1 696 aa8.74□□□□□ -1.01
VPS36-201ENST00000378060 KIAA1257Q9ULG3 409 aa8.74□□□□□ -1.01
VPS36-201ENST00000378060 SNX9Q9Y5X1 595 aa8.74□□□□□ -1.01
VPS36-201ENST00000378060 MAN1A2O60476 641 aa8.73□□□□□ -1.01
VPS36-201ENST00000378060 GLRA3O75311 464 aa8.73□□□□□ -1.01
VPS36-201ENST00000378060 HSPA1AP0DMV8 641 aaKnown RBP8.73□□□□□ -1.01
VPS36-201ENST00000378060 HSPA1BP0DMV9 641 aaKnown RBP8.73□□□□□ -1.01
VPS36-201ENST00000378060 FDFT1P37268 417 aa8.73□□□□□ -1.01
VPS36-201ENST00000378060 RANBP1P43487 201 aa8.73□□□□□ -1.01
VPS36-201ENST00000378060 NSUN2Q08J23 767 aaKnown RBP eCLIP8.73□□□□□ -1.01
VPS36-201ENST00000378060 MDH1BQ5I0G3 518 aa8.73□□□□□ -1.01
VPS36-201ENST00000378060 RNF135Q8IUD6 432 aa8.73□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms