RNA–Protein interactions for RNA: ENST00000375425.9

NELFE-201, Transcript of negative elongation factor complex member E, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene NELFE, Length 1,405 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFE-201ENST00000375425 SPATA2LQ8IUW3 424 aaPredicted RBP15.26■□□□□ 0.03
NELFE-201ENST00000375425 ZBTB44Q8NCP5 570 aa15.26■□□□□ 0.03
NELFE-201ENST00000375425 NELL1Q92832 810 aa15.26■□□□□ 0.03
NELFE-201ENST00000375425 CCDC127Q96BQ5 260 aa15.26■□□□□ 0.03
NELFE-201ENST00000375425 MSANTD3Q96H12 275 aa15.26■□□□□ 0.03
NELFE-201ENST00000375425 FNBP1Q96RU3 617 aa15.26■□□□□ 0.03
NELFE-201ENST00000375425 MMS19Q96T76 1030 aa15.26■□□□□ 0.03
NELFE-201ENST00000375425 PRMT8Q9NR22 394 aaPredicted RBP15.26■□□□□ 0.03
NELFE-201ENST00000375425 THG1LQ9NWX6 298 aaKnown RBP15.26■□□□□ 0.03
NELFE-201ENST00000375425 UBE4BO95155 1302 aa15.25■□□□□ 0.03
NELFE-201ENST00000375425 SPECC1L-ADORA2AF8WAN1 911 aa15.25■□□□□ 0.03
NELFE-201ENST00000375425 PDGFRBP09619 1106 aa15.25■□□□□ 0.03
NELFE-201ENST00000375425 DDX6P26196 483 aaKnown RBP eCLIP15.25■□□□□ 0.03
NELFE-201ENST00000375425 CYP24A1Q07973 514 aa15.25■□□□□ 0.03
NELFE-201ENST00000375425 GAS6Q14393 721 aa15.25■□□□□ 0.03
NELFE-201ENST00000375425 PSMD6Q15008 389 aa15.25■□□□□ 0.03
NELFE-201ENST00000375425 TXNDC11Q6PKC3 985 aa15.25■□□□□ 0.03
NELFE-201ENST00000375425 RALGPS2Q86X27 583 aaPredicted RBP15.25■□□□□ 0.03
NELFE-201ENST00000375425 GRAMD1CQ8IYS0 662 aa15.25■□□□□ 0.03
NELFE-201ENST00000375425 CEP57L1Q8IYX8 460 aa15.25■□□□□ 0.03
NELFE-201ENST00000375425 DCLK2Q8N568 766 aa15.25■□□□□ 0.03
NELFE-201ENST00000375425 XXYLT1Q8NBI6 393 aa15.25■□□□□ 0.03
NELFE-201ENST00000375425 KBTBD7Q8WVZ9 684 aa15.25■□□□□ 0.03
NELFE-201ENST00000375425 RUBCNQ92622 972 aa15.25■□□□□ 0.03
NELFE-201ENST00000375425 MRPS31Q92665 395 aaKnown RBP15.25■□□□□ 0.03
NELFE-201ENST00000375425 FUBP3Q96I24 572 aaKnown RBP eCLIP15.25■□□□□ 0.03
NELFE-201ENST00000375425 HINFPQ9BQA5 517 aa15.25■□□□□ 0.03
NELFE-201ENST00000375425 GKN1Q9NS71 199 aa15.25■□□□□ 0.03
NELFE-201ENST00000375425 TDP1Q9NUW8 608 aa15.25■□□□□ 0.03
NELFE-201ENST00000375425 SERTAD1Q9UHV2 236 aa15.25■□□□□ 0.03
NELFE-201ENST00000375425 CCL26Q9Y258 94 aa15.25■□□□□ 0.03
NELFE-201ENST00000375425 SPTBN4Q9H254 2564 aa15.24■□□□□ 0.03
NELFE-201ENST00000375425 SOBPA7XYQ1 873 aa15.24■□□□□ 0.03
NELFE-201ENST00000375425 SLFN14P0C7P3 912 aa15.24■□□□□ 0.03
NELFE-201ENST00000375425 CTHP32929 405 aa15.24■□□□□ 0.03
NELFE-201ENST00000375425 PSMC1P62191 440 aaKnown RBP15.24■□□□□ 0.03
NELFE-201ENST00000375425 KNOP1Q1ED39 458 aaKnown RBP15.24■□□□□ 0.03
NELFE-201ENST00000375425 BMT2Q1RMZ1 405 aa15.24■□□□□ 0.03
NELFE-201ENST00000375425 MON1AQ86VX9 555 aa15.24■□□□□ 0.03
NELFE-201ENST00000375425 SCN4BQ8IWT1 228 aa15.24■□□□□ 0.03
NELFE-201ENST00000375425 USP13Q92995 863 aaPredicted RBP15.24■□□□□ 0.03
NELFE-201ENST00000375425 MYRFLQ96LU7 910 aa15.24■□□□□ 0.03
NELFE-201ENST00000375425 CGRRF1Q99675 332 aa15.24■□□□□ 0.03
NELFE-201ENST00000375425 FAM83CQ9BQN1 747 aa15.24■□□□□ 0.03
NELFE-201ENST00000375425 SYT15Q9BQS2 421 aa15.24■□□□□ 0.03
NELFE-201ENST00000375425 IER2Q9BTL4 223 aa15.24■□□□□ 0.03
NELFE-201ENST00000375425 FAM126AQ9BYI3 521 aaPredicted RBP15.24■□□□□ 0.03
NELFE-201ENST00000375425 RBM12Q9NTZ6 932 aaKnown RBP15.24■□□□□ 0.03
NELFE-201ENST00000375425 MAGEC2Q9UBF1 373 aaPredicted RBP15.24■□□□□ 0.03
NELFE-201ENST00000375425 UXTQ9UBK9 157 aaPredicted RBP15.24■□□□□ 0.03
NELFE-201ENST00000375425 CDH9Q9ULB4 789 aa15.24■□□□□ 0.03
NELFE-201ENST00000375425 TCHHQ07283 1943 aa15.24■□□□□ 0.03
NELFE-201ENST00000375425 LILRB5O75023 590 aa15.23■□□□□ 0.03
NELFE-201ENST00000375425 NOL4O94818 638 aa15.23■□□□□ 0.03
NELFE-201ENST00000375425 WARSP23381 471 aaKnown RBP15.23■□□□□ 0.03
NELFE-201ENST00000375425 GNL1P36915 607 aaPredicted RBP15.23■□□□□ 0.03
NELFE-201ENST00000375425 CXCL12P48061 93 aa15.23■□□□□ 0.03
NELFE-201ENST00000375425 CCR3P51677 355 aa15.23■□□□□ 0.03
NELFE-201ENST00000375425 NRLP54845 237 aa15.23■□□□□ 0.03
NELFE-201ENST00000375425 LRRC32Q14392 662 aa15.23■□□□□ 0.03
NELFE-201ENST00000375425 PPP2R5DQ14738 602 aa15.23■□□□□ 0.03
NELFE-201ENST00000375425 PON2Q15165 354 aa15.23■□□□□ 0.03
NELFE-201ENST00000375425 ITPRIPL2Q3MIP1 535 aa15.23■□□□□ 0.03
NELFE-201ENST00000375425 WDR44Q5JSH3 913 aa15.23■□□□□ 0.03
NELFE-201ENST00000375425 C4orf50Q6ZRC1 276 aa15.23■□□□□ 0.03
NELFE-201ENST00000375425 C12orf56Q8IXR9 622 aa15.23■□□□□ 0.03
NELFE-201ENST00000375425 KIAA2013Q8IYS2 634 aa15.23■□□□□ 0.03
NELFE-201ENST00000375425 ZNF516Q92618 1163 aa15.23■□□□□ 0.03
NELFE-201ENST00000375425 TRMT2BQ96GJ1 504 aaKnown RBP15.23■□□□□ 0.03
NELFE-201ENST00000375425 CRTAC1Q9NQ79 661 aa15.23■□□□□ 0.03
NELFE-201ENST00000375425 CGNQ9P2M7 1197 aaKnown RBP15.23■□□□□ 0.03
NELFE-201ENST00000375425 TICRRQ7Z2Z1 1910 aa15.22■□□□□ 0.03
NELFE-201ENST00000375425 A0A1B0GVL5 298 aa15.22■□□□□ 0.03
NELFE-201ENST00000375425 KLRC4O43908 158 aa15.22■□□□□ 0.03
NELFE-201ENST00000375425 TADA3O75528 432 aa15.22■□□□□ 0.03
NELFE-201ENST00000375425 TDGF1P13385 188 aa15.22■□□□□ 0.03
NELFE-201ENST00000375425 BDNFP23560 247 aa15.22■□□□□ 0.03
NELFE-201ENST00000375425 MAGEA11P43364 429 aa15.22■□□□□ 0.03
NELFE-201ENST00000375425 ID4P47928 161 aa15.22■□□□□ 0.03
NELFE-201ENST00000375425 STK4Q13043 487 aa15.22■□□□□ 0.03
NELFE-201ENST00000375425 MAPRE1Q15691 268 aaKnown RBP15.22■□□□□ 0.03
NELFE-201ENST00000375425 WDR72Q3MJ13 1102 aa15.22■□□□□ 0.03
NELFE-201ENST00000375425 DGKKQ5KSL6 1271 aa15.22■□□□□ 0.03
NELFE-201ENST00000375425 TRIM68Q6AZZ1 485 aa15.22■□□□□ 0.03
NELFE-201ENST00000375425 VSTM1Q6UX27 236 aa15.22■□□□□ 0.03
NELFE-201ENST00000375425 SPEM1Q8N4L4 309 aa15.22■□□□□ 0.03
NELFE-201ENST00000375425 RIN3Q8TB24 985 aa15.22■□□□□ 0.03
NELFE-201ENST00000375425 MYLPFQ96A32 169 aa15.22■□□□□ 0.03
NELFE-201ENST00000375425 PAGE5Q96GU1 130 aa15.22■□□□□ 0.03
NELFE-201ENST00000375425 CYP2S1Q96SQ9 504 aa15.22■□□□□ 0.03
NELFE-201ENST00000375425 GZF1Q9H116 711 aaPredicted RBP15.22■□□□□ 0.03
NELFE-201ENST00000375425 SNX25Q9H3E2 840 aa15.22■□□□□ 0.03
NELFE-201ENST00000375425 EBF3Q9H4W6 596 aa15.22■□□□□ 0.03
NELFE-201ENST00000375425 TRPC7Q9HCX4 862 aa15.22■□□□□ 0.03
NELFE-201ENST00000375425 GPR179Q6PRD1 2367 aa15.22■□□□□ 0.03
NELFE-201ENST00000375425 OTOL1A6NHN0 477 aaPredicted RBP15.21■□□□□ 0.03
NELFE-201ENST00000375425 ACTN4O43707 911 aaKnown RBP15.21■□□□□ 0.03
NELFE-201ENST00000375425 EXOC3O60645 756 aa15.21■□□□□ 0.03
NELFE-201ENST00000375425 TACC1O75410 805 aa15.21■□□□□ 0.03
NELFE-201ENST00000375425 COL4A2P08572 1712 aa15.21■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms