RNA–Protein interactions for RNA: ENST00000368069.7

COPA-202, Transcript of coatomer protein complex subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene COPA, Length 4,664 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPA-202ENST00000368069 WDR49Q8IV35 697 aa12.2□□□□□ -0.46
COPA-202ENST00000368069 HSD17B14Q9BPX1 270 aa12.2□□□□□ -0.46
COPA-202ENST00000368069 TRPV6Q9H1D0 765 aa12.2□□□□□ -0.46
COPA-202ENST00000368069 AVENQ9NQS1 362 aaPredicted RBP12.2□□□□□ -0.46
COPA-202ENST00000368069 GPATCH2LQ9NWQ4 482 aa12.2□□□□□ -0.46
COPA-202ENST00000368069 BAG5Q9UL15 447 aa12.2□□□□□ -0.46
COPA-202ENST00000368069 GAS2O43903 313 aaKnown RBP12.19□□□□□ -0.46
COPA-202ENST00000368069 SNHG28P0DPA3 235 aa12.19□□□□□ -0.46
COPA-202ENST00000368069 FECHP22830 423 aa12.19□□□□□ -0.46
COPA-202ENST00000368069 KLC1Q07866 573 aa12.19□□□□□ -0.46
COPA-202ENST00000368069 SLC15A2Q16348 729 aa12.19□□□□□ -0.46
COPA-202ENST00000368069 MTHFD1LQ6UB35 978 aa12.19□□□□□ -0.46
COPA-202ENST00000368069 PRPF39Q86UA1 669 aaKnown RBP12.19□□□□□ -0.46
COPA-202ENST00000368069 FRMD8Q9BZ67 464 aaPredicted RBP12.19□□□□□ -0.46
COPA-202ENST00000368069 KIAA1683Q9H0B3 1180 aa12.19□□□□□ -0.46
COPA-202ENST00000368069 DNALI1O14645 258 aaPredicted RBP12.19□□□□□ -0.46
COPA-202ENST00000368069 FSBPO95073 299 aa12.19□□□□□ -0.46
COPA-202ENST00000368069 LCA5LO95447 670 aa12.19□□□□□ -0.46
COPA-202ENST00000368069 CHEK2O96017 543 aa12.19□□□□□ -0.46
COPA-202ENST00000368069 YWHAHQ04917 246 aaPredicted RBP12.19□□□□□ -0.46
COPA-202ENST00000368069 LRRC36Q1X8D7 754 aa12.19□□□□□ -0.46
COPA-202ENST00000368069 SHROOM1Q2M3G4 852 aaPredicted RBP12.19□□□□□ -0.46
COPA-202ENST00000368069 MFSD7Q6UXD7 560 aa12.19□□□□□ -0.46
COPA-202ENST00000368069 ANO5Q75V66 913 aa12.19□□□□□ -0.46
COPA-202ENST00000368069 PRELID2Q8N945 189 aa12.19□□□□□ -0.46
COPA-202ENST00000368069 ICA1LQ8NDH6 482 aa12.19□□□□□ -0.46
COPA-202ENST00000368069 SLC24A2Q9UI40 661 aa12.19□□□□□ -0.46
COPA-202ENST00000368069 EEF2KO00418 725 aaKnown RBP12.19□□□□□ -0.46
COPA-202ENST00000368069 PECAM1P16284 738 aaPredicted RBP12.19□□□□□ -0.46
COPA-202ENST00000368069 CXCL9Q07325 125 aa12.19□□□□□ -0.46
COPA-202ENST00000368069 OR6P1Q8NGX9 317 aa12.19□□□□□ -0.46
COPA-202ENST00000368069 ATXN2LQ8WWM7 1075 aaKnown RBP12.19□□□□□ -0.46
COPA-202ENST00000368069 STAMBPL1Q96FJ0 436 aa12.19□□□□□ -0.46
COPA-202ENST00000368069 RXFP1Q9HBX9 757 aa12.19□□□□□ -0.46
COPA-202ENST00000368069 PCDH9Q9HC56 1237 aa12.19□□□□□ -0.46
COPA-202ENST00000368069 RNF181Q9P0P0 153 aa12.19□□□□□ -0.46
COPA-202ENST00000368069 GNGT2O14610 69 aa12.19□□□□□ -0.46
COPA-202ENST00000368069 ANP32DO95626 131 aa12.19□□□□□ -0.46
COPA-202ENST00000368069 ATP6V1G2O95670 118 aa12.19□□□□□ -0.46
COPA-202ENST00000368069 SLC25A27O95847 323 aa12.19□□□□□ -0.46
COPA-202ENST00000368069 RARBP10826 455 aa12.19□□□□□ -0.46
COPA-202ENST00000368069 IL1RL1Q01638 556 aa12.19□□□□□ -0.46
COPA-202ENST00000368069 PTK6Q13882 451 aa12.19□□□□□ -0.46
COPA-202ENST00000368069 NBPF12Q5TAG4 269 aaPredicted RBP12.19□□□□□ -0.46
COPA-202ENST00000368069 KDELC2Q7Z4H8 507 aa12.19□□□□□ -0.46
COPA-202ENST00000368069 USP33Q8TEY7 942 aa12.19□□□□□ -0.46
COPA-202ENST00000368069 GRID1Q9ULK0 1009 aa12.19□□□□□ -0.46
COPA-202ENST00000368069 DEUP1Q05D60 604 aa12.18□□□□□ -0.46
COPA-202ENST00000368069 DCAF6Q58WW2 860 aa12.18□□□□□ -0.46
COPA-202ENST00000368069 IQCKQ8N0W5 287 aa12.18□□□□□ -0.46
COPA-202ENST00000368069 ZBTB45Q96K62 511 aaPredicted RBP12.18□□□□□ -0.46
COPA-202ENST00000368069 CTNNAL1Q9UBT7 734 aa12.18□□□□□ -0.46
COPA-202ENST00000368069 VWA5AO00534 786 aa12.18□□□□□ -0.46
COPA-202ENST00000368069 NPTXRO95502 500 aa12.18□□□□□ -0.46
COPA-202ENST00000368069 VDRP11473 427 aa12.18□□□□□ -0.46
COPA-202ENST00000368069 FKBP1AP62942 108 aaKnown RBP12.18□□□□□ -0.46
COPA-202ENST00000368069 DUPD1Q68J44 220 aa12.18□□□□□ -0.46
COPA-202ENST00000368069 SLC9A9Q8IVB4 645 aa12.18□□□□□ -0.46
COPA-202ENST00000368069 CCDC33Q8N5R6 958 aa12.18□□□□□ -0.46
COPA-202ENST00000368069 TBRG4Q969Z0 631 aaKnown RBP eCLIP12.18□□□□□ -0.461e-6■■■■□ 23
COPA-202ENST00000368069 DRC3Q9H069 523 aa12.18□□□□□ -0.46
COPA-202ENST00000368069 DPP3Q9NY33 737 aa12.18□□□□□ -0.46
COPA-202ENST00000368069 VAV3Q9UKW4 847 aa12.18□□□□□ -0.46
COPA-202ENST00000368069 DNPEPQ9ULA0 475 aa12.18□□□□□ -0.46
COPA-202ENST00000368069 USP18Q9UMW8 372 aa12.18□□□□□ -0.46
COPA-202ENST00000368069 SHOC2Q9UQ13 582 aa12.18□□□□□ -0.46
COPA-202ENST00000368069 RGPD1P0DJD0 1748 aa12.18□□□□□ -0.46
COPA-202ENST00000368069 PFDN1O60925 122 aa12.18□□□□□ -0.46
COPA-202ENST00000368069 EFTUD2Q15029 972 aaKnown RBP eCLIP12.18□□□□□ -0.461e-6■■■□□ 18.5
COPA-202ENST00000368069 PDK1Q15118 436 aa12.18□□□□□ -0.46
COPA-202ENST00000368069 FAM71AQ8IYT1 594 aa12.18□□□□□ -0.46
COPA-202ENST00000368069 XAB2Q9HCS7 855 aaKnown RBP12.18□□□□□ -0.46
COPA-202ENST00000368069 DONSONQ9NYP3 566 aa12.18□□□□□ -0.46
COPA-202ENST00000368069 PCYOX1Q9UHG3 505 aa12.18□□□□□ -0.46
COPA-202ENST00000368069 TYW5A2RUC4 315 aaKnown RBP12.17□□□□□ -0.46
COPA-202ENST00000368069 TM4SF1P30408 202 aa12.17□□□□□ -0.46
COPA-202ENST00000368069 SERPINB4P48594 390 aa12.17□□□□□ -0.46
COPA-202ENST00000368069 PRAMEP78395 509 aa12.17□□□□□ -0.46
COPA-202ENST00000368069 GTF2BQ00403 316 aa12.17□□□□□ -0.46
COPA-202ENST00000368069 HABP4Q5JVS0 413 aaKnown RBP12.17□□□□□ -0.46
COPA-202ENST00000368069 MTDHQ86UE4 582 aaKnown RBP12.17□□□□□ -0.46
COPA-202ENST00000368069 LRRC43Q8N309 656 aa12.17□□□□□ -0.46
COPA-202ENST00000368069 IFT43Q96FT9 208 aa12.17□□□□□ -0.46
COPA-202ENST00000368069 VCPIP1Q96JH7 1222 aa12.17□□□□□ -0.46
COPA-202ENST00000368069 TRIM15Q9C019 465 aa12.17□□□□□ -0.46
COPA-202ENST00000368069 C3orf70A6NLC5 250 aaPredicted RBP12.17□□□□□ -0.46
COPA-202ENST00000368069 GSTA4O15217 222 aa12.17□□□□□ -0.46
COPA-202ENST00000368069 KIF1CO43896 1103 aaKnown RBP12.17□□□□□ -0.46
COPA-202ENST00000368069 CYP1A2P05177 515 aa12.17□□□□□ -0.46
COPA-202ENST00000368069 POLBP06746 335 aa12.17□□□□□ -0.46
COPA-202ENST00000368069 RFC1P35251 1148 aaPredicted RBP12.17□□□□□ -0.46
COPA-202ENST00000368069 SPRP35270 261 aaPredicted RBP12.17□□□□□ -0.46
COPA-202ENST00000368069 AMHR2Q16671 573 aa12.17□□□□□ -0.46
COPA-202ENST00000368069 C4orf22Q6V702 233 aa12.17□□□□□ -0.46
COPA-202ENST00000368069 ACOT1Q86TX2 421 aa12.17□□□□□ -0.46
COPA-202ENST00000368069 ALG3Q92685 438 aa12.17□□□□□ -0.46
COPA-202ENST00000368069 ZNF669Q96BR6 464 aaPredicted RBP12.17□□□□□ -0.46
COPA-202ENST00000368069 SUN2Q9UH99 717 aa12.17□□□□□ -0.46
COPA-202ENST00000368069 SYNPO2Q9UMS6 1093 aa12.17□□□□□ -0.46
COPA-202ENST00000368069 DYNC1LI2O43237 492 aaPredicted RBP12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 80.8 ms