RNA–Protein interactions for RNA: ENST00000361311.4

CLSTN1-201, Transcript of calsyntenin 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLSTN1, Length 4,647 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-201ENST00000361311 ANPEPP15144 967 aa16.65■□□□□ 0.26
CLSTN1-201ENST00000361311 RAG1P15918 1043 aa16.65■□□□□ 0.26
CLSTN1-201ENST00000361311 STIP1P31948 543 aaKnown RBP16.65■□□□□ 0.26
CLSTN1-201ENST00000361311 VCPP55072 806 aaKnown RBP16.65■□□□□ 0.26
CLSTN1-201ENST00000361311 TTC33Q6PID6 262 aaPredicted RBP16.65■□□□□ 0.26
CLSTN1-201ENST00000361311 APOPT1Q96IL0 206 aa16.65■□□□□ 0.26
CLSTN1-201ENST00000361311 VPS39Q96JC1 886 aa16.65■□□□□ 0.26
CLSTN1-201ENST00000361311 FRMD8Q9BZ67 464 aaPredicted RBP16.65■□□□□ 0.26
CLSTN1-201ENST00000361311 GPR75-ASB3A0A0A6YYF3 556 aa16.65■□□□□ 0.26
CLSTN1-201ENST00000361311 GSTA4O15217 222 aa16.65■□□□□ 0.26
CLSTN1-201ENST00000361311 TNFAIP8O95379 198 aa16.65■□□□□ 0.26
CLSTN1-201ENST00000361311 SNRPFP62306 86 aaKnown RBP16.65■□□□□ 0.26
CLSTN1-201ENST00000361311 FAM47CQ5HY64 1035 aa16.65■□□□□ 0.26
CLSTN1-201ENST00000361311 SPOCD1Q6ZMY3 1216 aa16.65■□□□□ 0.26
CLSTN1-201ENST00000361311 C4orf50Q6ZRC1 276 aa16.65■□□□□ 0.26
CLSTN1-201ENST00000361311 TRABD2AQ86V40 505 aa16.65■□□□□ 0.26
CLSTN1-201ENST00000361311 EGFL6Q8IUX8 553 aa16.65■□□□□ 0.26
CLSTN1-201ENST00000361311 MCOLN2Q8IZK6 566 aa16.65■□□□□ 0.26
CLSTN1-201ENST00000361311 RYBPQ8N488 228 aaPredicted RBP16.65■□□□□ 0.26
CLSTN1-201ENST00000361311 ZFRQ96KR1 1074 aaKnown RBP16.65■□□□□ 0.26
CLSTN1-201ENST00000361311 ZNF317Q96PQ6 595 aaPredicted RBP16.65■□□□□ 0.26
CLSTN1-201ENST00000361311 ECSITQ9BQ95 431 aa16.65■□□□□ 0.26
CLSTN1-201ENST00000361311 IPO11Q9UI26 975 aaKnown RBP16.65■□□□□ 0.26
CLSTN1-201ENST00000361311 DNPEPQ9ULA0 475 aa16.65■□□□□ 0.26
CLSTN1-201ENST00000361311 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP16.64■□□□□ 0.25
CLSTN1-201ENST00000361311 SMIM31A0A1B0GVY4 71 aa16.64■□□□□ 0.25
CLSTN1-201ENST00000361311 ARHGEF37A1IGU5 675 aa16.64■□□□□ 0.25
CLSTN1-201ENST00000361311 C16orf72Q14CZ0 275 aa16.64■□□□□ 0.25
CLSTN1-201ENST00000361311 NKX1-1Q15270 411 aaPredicted RBP16.64■□□□□ 0.25
CLSTN1-201ENST00000361311 ASTE1Q2TB18 679 aaPredicted RBP16.64■□□□□ 0.25
CLSTN1-201ENST00000361311 FASTKD1Q53R41 847 aaKnown RBP16.64■□□□□ 0.25
CLSTN1-201ENST00000361311 SWSAP1Q6NVH7 229 aa16.64■□□□□ 0.25
CLSTN1-201ENST00000361311 LPCAT2Q7L5N7 544 aa16.64■□□□□ 0.25
CLSTN1-201ENST00000361311 ZNF786Q8N393 782 aa16.64■□□□□ 0.25
CLSTN1-201ENST00000361311 ASAP3Q8TDY4 903 aa16.64■□□□□ 0.25
CLSTN1-201ENST00000361311 CYGBQ8WWM9 190 aa16.64■□□□□ 0.25
CLSTN1-201ENST00000361311 KCTD10Q9H3F6 313 aa16.64■□□□□ 0.25
CLSTN1-201ENST00000361311 FOXO6A8MYZ6 492 aa16.64■□□□□ 0.25
CLSTN1-201ENST00000361311 DDX3YO15523 660 aaKnown RBP16.64■□□□□ 0.25
CLSTN1-201ENST00000361311 TPBGLP0DKB5 382 aa16.64■□□□□ 0.25
CLSTN1-201ENST00000361311 SLC12A3P55017 1021 aa16.64■□□□□ 0.25
CLSTN1-201ENST00000361311 BMPR2Q13873 1038 aa16.64■□□□□ 0.25
CLSTN1-201ENST00000361311 KIAA2013Q8IYS2 634 aa16.64■□□□□ 0.25
CLSTN1-201ENST00000361311 NKX2-3Q8TAU0 364 aa16.64■□□□□ 0.25
CLSTN1-201ENST00000361311 EXT2Q93063 718 aa16.64■□□□□ 0.25
CLSTN1-201ENST00000361311 ZNF570Q96NI8 536 aa16.64■□□□□ 0.25
CLSTN1-201ENST00000361311 SRPK1Q96SB4 655 aaKnown RBP16.64■□□□□ 0.25
CLSTN1-201ENST00000361311 PRPF18Q99633 342 aaKnown RBP16.64■□□□□ 0.25
CLSTN1-201ENST00000361311 SNX25Q9H3E2 840 aa16.64■□□□□ 0.25
CLSTN1-201ENST00000361311 WDR35Q9P2L0 1181 aa16.64■□□□□ 0.25
CLSTN1-201ENST00000361311 THRAP10827 490 aa16.64■□□□□ 0.25
CLSTN1-201ENST00000361311 CREB1P16220 341 aa16.64■□□□□ 0.25
CLSTN1-201ENST00000361311 GTF2H1P32780 548 aa16.64■□□□□ 0.25
CLSTN1-201ENST00000361311 NLRP11P59045 1033 aaKnown RBP16.64■□□□□ 0.25
CLSTN1-201ENST00000361311 GPSM2P81274 684 aa16.64■□□□□ 0.25
CLSTN1-201ENST00000361311 DUOXA2Q1HG44 320 aa16.64■□□□□ 0.25
CLSTN1-201ENST00000361311 RIC1Q4ADV7 1423 aa16.64■□□□□ 0.25
CLSTN1-201ENST00000361311 RIPOR1Q6ZS17 1223 aa16.64■□□□□ 0.25
CLSTN1-201ENST00000361311 GRIP2Q9C0E4 1043 aa16.64■□□□□ 0.25
CLSTN1-201ENST00000361311 FBXO6Q9NRD1 293 aaPredicted RBP16.64■□□□□ 0.25
CLSTN1-201ENST00000361311 NYAP2Q9P242 653 aa16.64■□□□□ 0.25
CLSTN1-201ENST00000361311 MYO5BQ9ULV0 1848 aa16.63■□□□□ 0.25
CLSTN1-201ENST00000361311 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.63■□□□□ 0.25
CLSTN1-201ENST00000361311 ZSCAN5DPP0CG00 497 aa16.63■□□□□ 0.25
CLSTN1-201ENST00000361311 PDGFRAP16234 1089 aa16.63■□□□□ 0.25
CLSTN1-201ENST00000361311 GPAT2Q6NUI2 795 aa16.63■□□□□ 0.25
CLSTN1-201ENST00000361311 CLNKQ7Z7G1 428 aa16.63■□□□□ 0.25
CLSTN1-201ENST00000361311 KIFC3Q9BVG8 833 aa16.63■□□□□ 0.25
CLSTN1-201ENST00000361311 UNC45AQ9H3U1 944 aa16.63■□□□□ 0.25
CLSTN1-201ENST00000361311 SUN2Q9UH99 717 aa16.63■□□□□ 0.25
CLSTN1-201ENST00000361311 SUGT1Q9Y2Z0 365 aa16.63■□□□□ 0.25
CLSTN1-201ENST00000361311 GJB6O95452 261 aa16.63■□□□□ 0.25
CLSTN1-201ENST00000361311 SERPINB5P36952 375 aa16.63■□□□□ 0.25
CLSTN1-201ENST00000361311 MARSP56192 900 aaKnown RBP16.63■□□□□ 0.25
CLSTN1-201ENST00000361311 PLOD1Q02809 727 aaPredicted RBP16.63■□□□□ 0.25
CLSTN1-201ENST00000361311 MYBPC2Q14324 1141 aa16.63■□□□□ 0.25
CLSTN1-201ENST00000361311 TRIM16LQ309B1 348 aa16.63■□□□□ 0.25
CLSTN1-201ENST00000361311 KCNT1Q5JUK3 1230 aa16.63■□□□□ 0.25
CLSTN1-201ENST00000361311 BNC2Q6ZN30 1099 aaPredicted RBP16.63■□□□□ 0.25
CLSTN1-201ENST00000361311 NET1Q7Z628 596 aaPredicted RBP16.63■□□□□ 0.25
CLSTN1-201ENST00000361311 OR6Y1Q8NGX8 325 aa16.63■□□□□ 0.25
CLSTN1-201ENST00000361311 EPS8L1Q8TE68 723 aa16.63■□□□□ 0.25
CLSTN1-201ENST00000361311 KAT5Q92993 513 aa16.63■□□□□ 0.25
CLSTN1-201ENST00000361311 GALNT8Q9NY28 637 aa16.63■□□□□ 0.25
CLSTN1-201ENST00000361311 RPS6KA4O75676 772 aa16.63■□□□□ 0.25
CLSTN1-201ENST00000361311 RTN3O95197 1032 aaPredicted RBP16.63■□□□□ 0.25
CLSTN1-201ENST00000361311 INPP5AQ14642 412 aa16.63■□□□□ 0.25
CLSTN1-201ENST00000361311 GPR162Q16538 588 aa16.63■□□□□ 0.25
CLSTN1-201ENST00000361311 MTHFD1LQ6UB35 978 aa16.63■□□□□ 0.25
CLSTN1-201ENST00000361311 FAM237BA0A1B0GVD1 139 aa16.63■□□□□ 0.25
CLSTN1-201ENST00000361311 SPDYE5A6NIY4 337 aa16.63■□□□□ 0.25
CLSTN1-201ENST00000361311 GSC2O15499 205 aa16.63■□□□□ 0.25
CLSTN1-201ENST00000361311 ABHD2P08910 425 aa16.63■□□□□ 0.25
CLSTN1-201ENST00000361311 ELK3P41970 407 aa16.63■□□□□ 0.25
CLSTN1-201ENST00000361311 IGBP1P78318 339 aa16.63■□□□□ 0.25
CLSTN1-201ENST00000361311 CYP4A22Q5TCH4 519 aa16.63■□□□□ 0.25
CLSTN1-201ENST00000361311 PLA2G4FQ68DD2 849 aa16.63■□□□□ 0.25
CLSTN1-201ENST00000361311 PGBD4Q96DM1 585 aa16.63■□□□□ 0.25
CLSTN1-201ENST00000361311 ACP6Q9NPH0 428 aa16.63■□□□□ 0.25
CLSTN1-201ENST00000361311 ARHGAP23Q9P227 1491 aa16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 65.8 ms