RNA–Protein interactions for RNA: ENST00000319234.4

SHISA3-201, Transcript of shisa family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHISA3, Length 1,971 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA3-201ENST00000319234 SNX27Q96L92 541 aa19.28■□□□□ 0.68
SHISA3-201ENST00000319234 ZIC5Q96T25 663 aa19.28■□□□□ 0.68
SHISA3-201ENST00000319234 LHX5Q9H2C1 402 aa19.28■□□□□ 0.68
SHISA3-201ENST00000319234 FAM124BQ9H5Z6 455 aaPredicted RBP19.28■□□□□ 0.68
SHISA3-201ENST00000319234 SBDSQ9Y3A5 250 aaKnown RBP eCLIP19.28■□□□□ 0.68
SHISA3-201ENST00000319234 CHN1P15882 459 aa19.27■□□□□ 0.68
SHISA3-201ENST00000319234 ITIH2P19823 946 aa19.27■□□□□ 0.68
SHISA3-201ENST00000319234 HNRNPH1P31943 449 aaKnown RBP19.27■□□□□ 0.68
SHISA3-201ENST00000319234 YARSP54577 528 aaKnown RBP19.27■□□□□ 0.68
SHISA3-201ENST00000319234 CAV1Q03135 178 aa19.27■□□□□ 0.68
SHISA3-201ENST00000319234 SNX17Q15036 470 aa19.27■□□□□ 0.68
SHISA3-201ENST00000319234 C7orf31Q8N865 590 aa19.27■□□□□ 0.68
SHISA3-201ENST00000319234 ATXN2LQ8WWM7 1075 aaKnown RBP19.27■□□□□ 0.68
SHISA3-201ENST00000319234 HOMER3Q9NSC5 361 aa19.27■□□□□ 0.68
SHISA3-201ENST00000319234 GOLGA6L7A0A1B0GV03 622 aa19.26■□□□□ 0.67
SHISA3-201ENST00000319234 TLDC2A0PJX2 215 aa19.26■□□□□ 0.67
SHISA3-201ENST00000319234 RASGRF2O14827 1237 aa19.26■□□□□ 0.67
SHISA3-201ENST00000319234 TLR3O15455 904 aaKnown RBP19.26■□□□□ 0.67
SHISA3-201ENST00000319234 PSMC4P43686 418 aa19.26■□□□□ 0.67
SHISA3-201ENST00000319234 LACTB2Q53H82 288 aaPredicted RBP19.26■□□□□ 0.67
SHISA3-201ENST00000319234 MFSD14CQ5VZR4 134 aa19.26■□□□□ 0.67
SHISA3-201ENST00000319234 FBXW10Q5XX13 1052 aa19.26■□□□□ 0.67
SHISA3-201ENST00000319234 DENND1BQ6P3S1 775 aa19.26■□□□□ 0.67
SHISA3-201ENST00000319234 ERICH1Q86X53 443 aa19.26■□□□□ 0.67
SHISA3-201ENST00000319234 TTC39CQ8N584 583 aa19.26■□□□□ 0.67
SHISA3-201ENST00000319234 SLC4A11Q8NBS3 891 aa19.26■□□□□ 0.67
SHISA3-201ENST00000319234 GADD45GIP1Q8TAE8 222 aaPredicted RBP19.26■□□□□ 0.67
SHISA3-201ENST00000319234 TMEM176AQ96HP8 235 aa19.26■□□□□ 0.67
SHISA3-201ENST00000319234 HHIPL1Q96JK4 782 aa19.26■□□□□ 0.67
SHISA3-201ENST00000319234 ZNF317Q96PQ6 595 aaPredicted RBP19.26■□□□□ 0.67
SHISA3-201ENST00000319234 ELOVL4Q9GZR5 314 aa19.26■□□□□ 0.67
SHISA3-201ENST00000319234 ADAM7Q9H2U9 754 aa19.26■□□□□ 0.67
SHISA3-201ENST00000319234 PTPN22Q9Y2R2 807 aa19.26■□□□□ 0.67
SHISA3-201ENST00000319234 C6orf222P0C671 652 aaPredicted RBP19.26■□□□□ 0.67
SHISA3-201ENST00000319234 CRYBB1P53674 252 aaPredicted RBP19.26■□□□□ 0.67
SHISA3-201ENST00000319234 GJA9P57773 515 aa19.26■□□□□ 0.67
SHISA3-201ENST00000319234 KRT17Q04695 432 aa19.26■□□□□ 0.67
SHISA3-201ENST00000319234 PTK6Q13882 451 aa19.26■□□□□ 0.67
SHISA3-201ENST00000319234 CCDC13Q8IYE1 715 aa19.26■□□□□ 0.67
SHISA3-201ENST00000319234 MDM1Q8TC05 714 aa19.26■□□□□ 0.67
SHISA3-201ENST00000319234 SELENOSQ9BQE4 189 aa19.26■□□□□ 0.67
SHISA3-201ENST00000319234 TCRBV5S1A1TA0A578 114 aa19.25■□□□□ 0.67
SHISA3-201ENST00000319234 GHRP10912 638 aa19.25■□□□□ 0.67
SHISA3-201ENST00000319234 CYBAP13498 195 aa19.25■□□□□ 0.67
SHISA3-201ENST00000319234 KCNJ1P48048 391 aa19.25■□□□□ 0.67
SHISA3-201ENST00000319234 PTPN11Q06124 597 aaPredicted RBP19.25■□□□□ 0.67
SHISA3-201ENST00000319234 ZBTB6Q15916 424 aa19.25■□□□□ 0.67
SHISA3-201ENST00000319234 RHBDF2Q6PJF5 856 aa19.25■□□□□ 0.67
SHISA3-201ENST00000319234 TMEM40Q8WWA1 233 aa19.25■□□□□ 0.67
SHISA3-201ENST00000319234 SNF8Q96H20 258 aa19.25■□□□□ 0.67
SHISA3-201ENST00000319234 TWNKQ96RR1 684 aa19.25■□□□□ 0.67
SHISA3-201ENST00000319234 MTG1Q9BT17 334 aaPredicted RBP19.25■□□□□ 0.67
SHISA3-201ENST00000319234 TRIM6Q9C030 488 aaPredicted RBP19.25■□□□□ 0.67
SHISA3-201ENST00000319234 ARHGAP39Q9C0H5 1083 aa19.25■□□□□ 0.67
SHISA3-201ENST00000319234 IP6K2Q9UHH9 426 aa19.25■□□□□ 0.67
SHISA3-201ENST00000319234 MYADML2A6NDP7 307 aa19.24■□□□□ 0.67
SHISA3-201ENST00000319234 TMEM191CA6NGB0 347 aa19.24■□□□□ 0.67
SHISA3-201ENST00000319234 GAS8O95995 478 aa19.24■□□□□ 0.67
SHISA3-201ENST00000319234 ATP5DP30049 168 aa19.24■□□□□ 0.67
SHISA3-201ENST00000319234 INCA1Q0VD86 236 aa19.24■□□□□ 0.67
SHISA3-201ENST00000319234 MYO1EQ12965 1108 aa19.24■□□□□ 0.67
SHISA3-201ENST00000319234 AUHQ13825 339 aaKnown RBP19.24■□□□□ 0.67
SHISA3-201ENST00000319234 DNAJC24Q6P3W2 148 aa19.24■□□□□ 0.67
SHISA3-201ENST00000319234 ALKAL1Q6UXT8 129 aa19.24■□□□□ 0.67
SHISA3-201ENST00000319234 DDX27Q96GQ7 796 aaKnown RBP19.24■□□□□ 0.67
SHISA3-201ENST00000319234 ZMAT2Q96NC0 199 aaKnown RBP19.24■□□□□ 0.67
SHISA3-201ENST00000319234 CXCL16Q9H2A7 254 aa19.24■□□□□ 0.67
SHISA3-201ENST00000319234 KDM4CQ9H3R0 1056 aa19.24■□□□□ 0.67
SHISA3-201ENST00000319234 INTS9Q9NV88 658 aaKnown RBP19.24■□□□□ 0.67
SHISA3-201ENST00000319234 BARX2Q9UMQ3 279 aaPredicted RBP19.24■□□□□ 0.67
SHISA3-201ENST00000319234 GABRQQ9UN88 632 aa19.24■□□□□ 0.67
SHISA3-201ENST00000319234 PIN4Q9Y237 131 aaKnown RBP19.24■□□□□ 0.67
SHISA3-201ENST00000319234 PSTPIP1O43586 416 aa19.24■□□□□ 0.67
SHISA3-201ENST00000319234 GJB6O95452 261 aa19.24■□□□□ 0.67
SHISA3-201ENST00000319234 ALDH1A1P00352 501 aa19.24■□□□□ 0.67
SHISA3-201ENST00000319234 VDRP11473 427 aa19.24■□□□□ 0.67
SHISA3-201ENST00000319234 IFI35P80217 286 aaPredicted RBP19.24■□□□□ 0.67
SHISA3-201ENST00000319234 TAP1Q03518 808 aa19.24■□□□□ 0.67
SHISA3-201ENST00000319234 ITIH4Q14624 930 aa19.24■□□□□ 0.67
SHISA3-201ENST00000319234 ANKRD20A8PQ5CZ79 823 aa19.24■□□□□ 0.67
SHISA3-201ENST00000319234 GNASQ5JWF2 1037 aa19.24■□□□□ 0.67
SHISA3-201ENST00000319234 RHOT1Q8IXI2 618 aa19.24■□□□□ 0.67
SHISA3-201ENST00000319234 ANKS4BQ8N8V4 417 aa19.24■□□□□ 0.67
SHISA3-201ENST00000319234 CCDC197Q8NCU1 140 aa19.24■□□□□ 0.67
SHISA3-201ENST00000319234 BEST2Q8NFU1 509 aa19.24■□□□□ 0.67
SHISA3-201ENST00000319234 EPS8L3Q8TE67 593 aaKnown RBP19.24■□□□□ 0.67
SHISA3-201ENST00000319234 TRIB2Q92519 343 aa19.24■□□□□ 0.67
SHISA3-201ENST00000319234 SERPINB12Q96P63 405 aa19.24■□□□□ 0.67
SHISA3-201ENST00000319234 OSBPL7Q9BZF2 842 aa19.24■□□□□ 0.67
SHISA3-201ENST00000319234 CNTN3Q9P232 1028 aa19.24■□□□□ 0.67
SHISA3-201ENST00000319234 HMGXB4Q9UGU5 601 aa19.24■□□□□ 0.67
SHISA3-201ENST00000319234 STRIP2Q9ULQ0 834 aa19.24■□□□□ 0.67
SHISA3-201ENST00000319234 HES2Q9Y543 173 aa19.24■□□□□ 0.67
SHISA3-201ENST00000319234 TMEM88BA6NKF7 163 aa19.23■□□□□ 0.67
SHISA3-201ENST00000319234 ORC1Q13415 861 aa19.23■□□□□ 0.67
SHISA3-201ENST00000319234 TAF2Q6P1X5 1199 aa19.23■□□□□ 0.67
SHISA3-201ENST00000319234 C1orf54Q8WWF1 131 aa19.23■□□□□ 0.67
SHISA3-201ENST00000319234 UPF3AQ9H1J1 476 aaKnown RBP19.23■□□□□ 0.67
SHISA3-201ENST00000319234 CDC42EP4Q9H3Q1 356 aaKnown RBP19.23■□□□□ 0.67
SHISA3-201ENST00000319234 NXF3Q9H4D5 531 aaKnown RBP19.23■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 82.6 ms