RNA–Protein interactions for RNA: ENST00000298564.14

TSPAN17-201, Transcript of tetraspanin 17, humanhuman

TSL 2 BASIC

Gene TSPAN17, Length 2,810 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN17-201ENST00000298564 PECAM1P16284 738 aaPredicted RBP18.73■□□□□ 0.59
TSPAN17-201ENST00000298564 STAT5BP51692 787 aa18.73■□□□□ 0.59
TSPAN17-201ENST00000298564 YARSP54577 528 aaKnown RBP18.73■□□□□ 0.59
TSPAN17-201ENST00000298564 SPARCL1Q14515 664 aa18.73■□□□□ 0.59
TSPAN17-201ENST00000298564 ABRAQ8N0Z2 381 aa18.73■□□□□ 0.59
TSPAN17-201ENST00000298564 TRIM11Q96F44 468 aa18.73■□□□□ 0.59
TSPAN17-201ENST00000298564 DDX27Q96GQ7 796 aaKnown RBP18.73■□□□□ 0.59
TSPAN17-201ENST00000298564 SMC6Q96SB8 1091 aa18.73■□□□□ 0.59
TSPAN17-201ENST00000298564 NMRK1Q9NWW6 199 aa18.73■□□□□ 0.59
TSPAN17-201ENST00000298564 ZNF148Q9UQR1 794 aa18.73■□□□□ 0.59
TSPAN17-201ENST00000298564 LRRD1A4D1F6 860 aa18.72■□□□□ 0.59
TSPAN17-201ENST00000298564 POLE2P56282 527 aa18.72■□□□□ 0.59
TSPAN17-201ENST00000298564 RCN1Q15293 331 aa18.72■□□□□ 0.59
TSPAN17-201ENST00000298564 EAPPQ56P03 285 aaPredicted RBP18.72■□□□□ 0.59
TSPAN17-201ENST00000298564 SH3D19Q5HYK7 790 aa18.72■□□□□ 0.59
TSPAN17-201ENST00000298564 AP1ARQ63HQ0 302 aa18.72■□□□□ 0.59
TSPAN17-201ENST00000298564 ZBTB33Q86T24 672 aa18.72■□□□□ 0.59
TSPAN17-201ENST00000298564 NCAPG2Q86XI2 1143 aa18.72■□□□□ 0.59
TSPAN17-201ENST00000298564 RBBP8NLQ8NC74 664 aaPredicted RBP18.72■□□□□ 0.59
TSPAN17-201ENST00000298564 NRG4Q8WWG1 115 aa18.72■□□□□ 0.59
TSPAN17-201ENST00000298564 CGRRF1Q99675 332 aa18.72■□□□□ 0.59
TSPAN17-201ENST00000298564 STARD13Q9Y3M8 1113 aa18.72■□□□□ 0.59
TSPAN17-201ENST00000298564 SNCAIPQ9Y6H5 919 aa18.72■□□□□ 0.59
TSPAN17-201ENST00000298564 ADGRA2Q96PE1 1338 aa18.72■□□□□ 0.59
TSPAN17-201ENST00000298564 A0A1B0GVG6 124 aa18.72■□□□□ 0.59
TSPAN17-201ENST00000298564 SOWAHBA6NEL2 793 aa18.72■□□□□ 0.59
TSPAN17-201ENST00000298564 EDF1O60869 148 aaKnown RBP18.72■□□□□ 0.59
TSPAN17-201ENST00000298564 TNFSF9P41273 254 aa18.72■□□□□ 0.59
TSPAN17-201ENST00000298564 SLC1A1P43005 524 aa18.72■□□□□ 0.59
TSPAN17-201ENST00000298564 NOMO3P69849 1222 aa18.72■□□□□ 0.59
TSPAN17-201ENST00000298564 PLCB3Q01970 1234 aa18.72■□□□□ 0.59
TSPAN17-201ENST00000298564 GPS1Q13098 491 aa18.72■□□□□ 0.59
TSPAN17-201ENST00000298564 ACVR2BQ13705 512 aa18.72■□□□□ 0.59
TSPAN17-201ENST00000298564 NCOA4Q13772 614 aa18.72■□□□□ 0.59
TSPAN17-201ENST00000298564 KPNB1Q14974 876 aaKnown RBP18.72■□□□□ 0.59
TSPAN17-201ENST00000298564 TARBP2Q15633 366 aaKnown RBP18.72■□□□□ 0.59
TSPAN17-201ENST00000298564 LMNTD2Q8IXW0 634 aa18.72■□□□□ 0.59
TSPAN17-201ENST00000298564 AGGF1Q8N302 714 aaeCLIP18.72■□□□□ 0.596e-6■■□□□ 12.4
TSPAN17-201ENST00000298564 C10orf82Q8WW14 230 aa18.72■□□□□ 0.59
TSPAN17-201ENST00000298564 PRPF31Q8WWY3 499 aaKnown RBP18.72■□□□□ 0.59
TSPAN17-201ENST00000298564 R3HDMLQ9H3Y0 253 aa18.72■□□□□ 0.59
TSPAN17-201ENST00000298564 PAPOLBQ9NRJ5 636 aaKnown RBP18.72■□□□□ 0.59
TSPAN17-201ENST00000298564 NRBP2Q9NSY0 501 aa18.72■□□□□ 0.59
TSPAN17-201ENST00000298564 SBDSQ9Y3A5 250 aaKnown RBP eCLIP18.72■□□□□ 0.59
TSPAN17-201ENST00000298564 CST3P01034 146 aaPredicted RBP18.71■□□□□ 0.59
TSPAN17-201ENST00000298564 ATP6V1C1P21283 382 aa18.71■□□□□ 0.59
TSPAN17-201ENST00000298564 ALDH3A1P30838 453 aa18.71■□□□□ 0.59
TSPAN17-201ENST00000298564 RCN2Q14257 317 aa18.71■□□□□ 0.59
TSPAN17-201ENST00000298564 STAT4Q14765 748 aa18.71■□□□□ 0.59
TSPAN17-201ENST00000298564 LY6KQ17RY6 165 aa18.71■□□□□ 0.59
TSPAN17-201ENST00000298564 MDH1BQ5I0G3 518 aa18.71■□□□□ 0.59
TSPAN17-201ENST00000298564 DENND1AQ8TEH3 1009 aa18.71■□□□□ 0.59
TSPAN17-201ENST00000298564 SH3GL3Q99963 347 aa18.71■□□□□ 0.59
TSPAN17-201ENST00000298564 TCHPQ9BT92 498 aa18.71■□□□□ 0.59
TSPAN17-201ENST00000298564 CADM1Q9BY67 442 aaKnown RBP18.71■□□□□ 0.59
TSPAN17-201ENST00000298564 OSBPL8Q9BZF1 889 aa18.71■□□□□ 0.59
TSPAN17-201ENST00000298564 ARL8BQ9NVJ2 186 aa18.71■□□□□ 0.59
TSPAN17-201ENST00000298564 LGALS13Q9UHV8 139 aa18.71■□□□□ 0.59
TSPAN17-201ENST00000298564 C2CD2Q9Y426 696 aa18.71■□□□□ 0.59
TSPAN17-201ENST00000298564 ADCY3O60266 1144 aa18.71■□□□□ 0.59
TSPAN17-201ENST00000298564 PROSCO94903 275 aa18.71■□□□□ 0.59
TSPAN17-201ENST00000298564 MARK3P27448 753 aa18.71■□□□□ 0.59
TSPAN17-201ENST00000298564 TCF7P36402 384 aaPredicted RBP18.71■□□□□ 0.59
TSPAN17-201ENST00000298564 CCNG1P51959 295 aa18.71■□□□□ 0.59
TSPAN17-201ENST00000298564 MAMLD1Q13495 774 aa18.71■□□□□ 0.59
TSPAN17-201ENST00000298564 C11orf91Q3C1V1 193 aa18.71■□□□□ 0.59
TSPAN17-201ENST00000298564 LIN9Q5TKA1 542 aa18.71■□□□□ 0.59
TSPAN17-201ENST00000298564 SLC30A9Q6PML9 568 aa18.71■□□□□ 0.59
TSPAN17-201ENST00000298564 LRRC6Q86X45 466 aa18.71■□□□□ 0.59
TSPAN17-201ENST00000298564 ZNF75CPQ92670 426 aaPredicted RBP18.71■□□□□ 0.59
TSPAN17-201ENST00000298564 SSTR1P30872 391 aa18.7■□□□□ 0.58
TSPAN17-201ENST00000298564 SKIV2L2P42285 1042 aaKnown RBP18.7■□□□□ 0.58
TSPAN17-201ENST00000298564 ARSEP51690 589 aa18.7■□□□□ 0.58
TSPAN17-201ENST00000298564 PARP6Q2NL67 630 aa18.7■□□□□ 0.58
TSPAN17-201ENST00000298564 TTC7BQ86TV6 843 aa18.7■□□□□ 0.58
TSPAN17-201ENST00000298564 ZC3H18Q86VM9 953 aaKnown RBP18.7■□□□□ 0.58
TSPAN17-201ENST00000298564 WDR60Q8WVS4 1066 aa18.7■□□□□ 0.58
TSPAN17-201ENST00000298564 TMEM134Q9H6X4 195 aa18.7■□□□□ 0.58
TSPAN17-201ENST00000298564 EURLQ9NYK6 297 aa18.7■□□□□ 0.58
TSPAN17-201ENST00000298564 ARMCX1Q9P291 453 aa18.7■□□□□ 0.58
TSPAN17-201ENST00000298564 SRGAP2CP0DJJ0 459 aa18.7■□□□□ 0.58
TSPAN17-201ENST00000298564 ARMC3Q5W041 872 aa18.7■□□□□ 0.58
TSPAN17-201ENST00000298564 KCNN1Q92952 543 aa18.7■□□□□ 0.58
TSPAN17-201ENST00000298564 GRAMD1AQ96CP6 724 aa18.7■□□□□ 0.58
TSPAN17-201ENST00000298564 SLC17A7Q9P2U7 560 aa18.7■□□□□ 0.58
TSPAN17-201ENST00000298564 PAPOLAP51003 745 aaKnown RBP18.69■□□□□ 0.58
TSPAN17-201ENST00000298564 PPP1R15BQ5SWA1 713 aa18.69■□□□□ 0.58
TSPAN17-201ENST00000298564 SNX30Q5VWJ9 437 aa18.69■□□□□ 0.58
TSPAN17-201ENST00000298564 RIOX2Q8IUF8 465 aa18.69■□□□□ 0.58
TSPAN17-201ENST00000298564 GRK7Q8WTQ7 553 aa18.69■□□□□ 0.58
TSPAN17-201ENST00000298564 PTPRN2Q92932 1015 aa18.69■□□□□ 0.58
TSPAN17-201ENST00000298564 TBXAS1P24557 533 aaPredicted RBP18.69■□□□□ 0.58
TSPAN17-201ENST00000298564 DYNLT1P63172 113 aa18.69■□□□□ 0.58
TSPAN17-201ENST00000298564 KLC1Q07866 573 aa18.69■□□□□ 0.58
TSPAN17-201ENST00000298564 CCDC15Q0P6D6 951 aa18.69■□□□□ 0.58
TSPAN17-201ENST00000298564 PDIA2Q13087 525 aaKnown RBP18.69■□□□□ 0.58
TSPAN17-201ENST00000298564 TRIM72Q6ZMU5 477 aa18.69■□□□□ 0.58
TSPAN17-201ENST00000298564 CLNKQ7Z7G1 428 aa18.69■□□□□ 0.58
TSPAN17-201ENST00000298564 CCDC89Q8N998 374 aa18.69■□□□□ 0.58
TSPAN17-201ENST00000298564 SCG3Q8WXD2 468 aaKnown RBP18.69■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms