RNA–Protein interactions for RNA: ENST00000262215.7

ARFGEF1-201, Transcript of ADP ribosylation factor guanine nucleotide exchange factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ARFGEF1, Length 7,225 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARFGEF1-201ENST00000262215 GGPS1O95749 300 aa12.92□□□□□ -0.34
ARFGEF1-201ENST00000262215 SNRPAP09012 282 aaKnown RBP12.92□□□□□ -0.34
ARFGEF1-201ENST00000262215 NOS3P29474 1203 aa12.92□□□□□ -0.34
ARFGEF1-201ENST00000262215 RGS2P41220 211 aa12.92□□□□□ -0.34
ARFGEF1-201ENST00000262215 COPAP53621 1224 aa12.92□□□□□ -0.34
ARFGEF1-201ENST00000262215 TAP1Q03518 808 aa12.92□□□□□ -0.34
ARFGEF1-201ENST00000262215 MMRN1Q13201 1228 aa12.92□□□□□ -0.34
ARFGEF1-201ENST00000262215 PLA2G4FQ68DD2 849 aa12.92□□□□□ -0.34
ARFGEF1-201ENST00000262215 ELP3Q9H9T3 547 aa12.92□□□□□ -0.34
ARFGEF1-201ENST00000262215 POLR1BQ9H9Y6 1135 aa12.92□□□□□ -0.34
ARFGEF1-201ENST00000262215 TMEM51Q9NW97 253 aa12.92□□□□□ -0.34
ARFGEF1-201ENST00000262215 TRIM24O15164 1050 aa12.92□□□□□ -0.34
ARFGEF1-201ENST00000262215 ITGB6P18564 788 aa12.92□□□□□ -0.34
ARFGEF1-201ENST00000262215 MRPS35P82673 323 aaKnown RBP12.92□□□□□ -0.34
ARFGEF1-201ENST00000262215 IL5RAQ01344 420 aa12.92□□□□□ -0.34
ARFGEF1-201ENST00000262215 SEZ6Q53EL9 994 aa12.92□□□□□ -0.34
ARFGEF1-201ENST00000262215 ZC2HC1CQ53FD0 456 aaPredicted RBP12.92□□□□□ -0.34
ARFGEF1-201ENST00000262215 GJB7Q6PEY0 223 aa12.92□□□□□ -0.34
ARFGEF1-201ENST00000262215 GATAD2AQ86YP4 633 aa12.92□□□□□ -0.34
ARFGEF1-201ENST00000262215 KATNAL1Q9BW62 490 aa12.92□□□□□ -0.34
ARFGEF1-201ENST00000262215 KRT16P08779 473 aa12.92□□□□□ -0.34
ARFGEF1-201ENST00000262215 CCND1P24385 295 aa12.92□□□□□ -0.34
ARFGEF1-201ENST00000262215 HLFQ16534 295 aa12.92□□□□□ -0.34
ARFGEF1-201ENST00000262215 UGP2Q16851 508 aa12.92□□□□□ -0.34
ARFGEF1-201ENST00000262215 KLK14Q9P0G3 267 aa12.92□□□□□ -0.34
ARFGEF1-201ENST00000262215 TRMT6Q9UJA5 497 aaKnown RBP12.92□□□□□ -0.34
ARFGEF1-201ENST00000262215 SNX12Q9UMY4 172 aa12.92□□□□□ -0.34
ARFGEF1-201ENST00000262215 SAC3D1A6NKF1 404 aa12.92□□□□□ -0.34
ARFGEF1-201ENST00000262215 CDH16O75309 829 aa12.92□□□□□ -0.34
ARFGEF1-201ENST00000262215 PTGER2P43116 358 aa12.92□□□□□ -0.34
ARFGEF1-201ENST00000262215 PLCL1Q15111 1095 aa12.92□□□□□ -0.34
ARFGEF1-201ENST00000262215 C12orf60Q5U649 245 aa12.92□□□□□ -0.34
ARFGEF1-201ENST00000262215 SEPHS2Q99611 448 aa12.92□□□□□ -0.34
ARFGEF1-201ENST00000262215 APOL2Q9BQE5 337 aa12.92□□□□□ -0.34
ARFGEF1-201ENST00000262215 COA1Q9GZY4 146 aa12.92□□□□□ -0.34
ARFGEF1-201ENST00000262215 TRIM39Q9HCM9 518 aa12.92□□□□□ -0.34
ARFGEF1-201ENST00000262215 EIF3LQ9Y262 564 aaKnown RBP12.92□□□□□ -0.34
ARFGEF1-201ENST00000262215 SLC9A8Q9Y2E8 581 aa12.92□□□□□ -0.34
ARFGEF1-201ENST00000262215 STON1Q9Y6Q2 735 aa12.92□□□□□ -0.34
ARFGEF1-201ENST00000262215 TNPO2O14787 897 aaKnown RBP12.92□□□□□ -0.34
ARFGEF1-201ENST00000262215 SFNP31947 248 aa12.92□□□□□ -0.34
ARFGEF1-201ENST00000262215 CLK2P49760 499 aaKnown RBP12.92□□□□□ -0.34
ARFGEF1-201ENST00000262215 TCEA2Q15560 299 aa12.92□□□□□ -0.34
ARFGEF1-201ENST00000262215 LLGL2Q6P1M3 1020 aa12.92□□□□□ -0.34
ARFGEF1-201ENST00000262215 PHACTR4Q8IZ21 702 aa12.92□□□□□ -0.34
ARFGEF1-201ENST00000262215 RTL3Q8N8U3 475 aaKnown RBP12.92□□□□□ -0.34
ARFGEF1-201ENST00000262215 FAM20AQ96MK3 541 aa12.92□□□□□ -0.34
ARFGEF1-201ENST00000262215 CINPQ9BW66 212 aaPredicted RBP12.92□□□□□ -0.34
ARFGEF1-201ENST00000262215 DAPK2Q9UIK4 370 aa12.92□□□□□ -0.34
ARFGEF1-201ENST00000262215 PRR12Q9ULL5 1215 aa12.92□□□□□ -0.34
ARFGEF1-201ENST00000262215 TRIM49D1C9J1S8 452 aa12.91□□□□□ -0.34
ARFGEF1-201ENST00000262215 LSP1P33241 339 aa12.91□□□□□ -0.34
ARFGEF1-201ENST00000262215 ARMC4Q5T2S8 1044 aa12.91□□□□□ -0.34
ARFGEF1-201ENST00000262215 KIF2CQ99661 725 aa12.91□□□□□ -0.34
ARFGEF1-201ENST00000262215 MKNK1Q9BUB5 465 aa12.91□□□□□ -0.34
ARFGEF1-201ENST00000262215 GRID1Q9ULK0 1009 aa12.91□□□□□ -0.34
ARFGEF1-201ENST00000262215 C1orf232A0A0U1RR37 186 aa12.91□□□□□ -0.34
ARFGEF1-201ENST00000262215 PSMC3P17980 439 aa12.91□□□□□ -0.34
ARFGEF1-201ENST00000262215 SRP54P61011 504 aaKnown RBP12.91□□□□□ -0.34
ARFGEF1-201ENST00000262215 FMR1NBQ8N0W7 255 aaPredicted RBP12.91□□□□□ -0.34
ARFGEF1-201ENST00000262215 TNIP2Q8NFZ5 429 aa12.91□□□□□ -0.34
ARFGEF1-201ENST00000262215 SEMA4DQ92854 862 aa12.91□□□□□ -0.34
ARFGEF1-201ENST00000262215 RNF181Q9P0P0 153 aa12.91□□□□□ -0.34
ARFGEF1-201ENST00000262215 HEY2Q9UBP5 337 aa12.91□□□□□ -0.34
ARFGEF1-201ENST00000262215 PRDM4Q9UKN5 801 aa12.91□□□□□ -0.34
ARFGEF1-201ENST00000262215 KIF24Q5T7B8 1368 aa12.91□□□□□ -0.34
ARFGEF1-201ENST00000262215 PVALEFA0A1B0GWK0 134 aa12.91□□□□□ -0.34
ARFGEF1-201ENST00000262215 TRAPPC3O43617 180 aa12.91□□□□□ -0.34
ARFGEF1-201ENST00000262215 FGFR1P11362 822 aa12.91□□□□□ -0.34
ARFGEF1-201ENST00000262215 COMTP21964 271 aa12.91□□□□□ -0.34
ARFGEF1-201ENST00000262215 RBBP4Q09028 425 aa12.91□□□□□ -0.34
ARFGEF1-201ENST00000262215 TOMM20Q15388 145 aa12.91□□□□□ -0.34
ARFGEF1-201ENST00000262215 DENND1BQ6P3S1 775 aa12.91□□□□□ -0.34
ARFGEF1-201ENST00000262215 RD3Q7Z3Z2 195 aa12.91□□□□□ -0.34
ARFGEF1-201ENST00000262215 TRMT2AQ8IZ69 625 aaKnown RBP12.91□□□□□ -0.34
ARFGEF1-201ENST00000262215 GPR108Q9NPR9 543 aa12.91□□□□□ -0.34
ARFGEF1-201ENST00000262215 GALNT8Q9NY28 637 aa12.91□□□□□ -0.34
ARFGEF1-201ENST00000262215 PCDHGA3Q9Y5H0 932 aa12.91□□□□□ -0.34
ARFGEF1-201ENST00000262215 A2MP01023 1474 aa12.91□□□□□ -0.34
ARFGEF1-201ENST00000262215 KIF28PB7ZC32 967 aa12.91□□□□□ -0.34
ARFGEF1-201ENST00000262215 NUDT14O95848 222 aa12.91□□□□□ -0.34
ARFGEF1-201ENST00000262215 CYP2E1P05181 493 aaPredicted RBP12.91□□□□□ -0.34
ARFGEF1-201ENST00000262215 EIF2B2P49770 351 aaKnown RBP12.91□□□□□ -0.34
ARFGEF1-201ENST00000262215 CDH18Q13634 790 aa12.91□□□□□ -0.34
ARFGEF1-201ENST00000262215 NFYCQ13952 458 aa12.91□□□□□ -0.34
ARFGEF1-201ENST00000262215 NECTIN1Q15223 517 aa12.91□□□□□ -0.34
ARFGEF1-201ENST00000262215 PRAMEF18Q5VWM3 479 aa12.91□□□□□ -0.34
ARFGEF1-201ENST00000262215 BARGINQ6ZT62 677 aa12.91□□□□□ -0.34
ARFGEF1-201ENST00000262215 ZIM3Q96PE6 472 aa12.91□□□□□ -0.34
ARFGEF1-201ENST00000262215 MED15Q96RN5 788 aa12.91□□□□□ -0.34
ARFGEF1-201ENST00000262215 DCUN1D5Q9BTE7 237 aa12.91□□□□□ -0.34
ARFGEF1-201ENST00000262215 ACAD9Q9H845 621 aa12.91□□□□□ -0.34
ARFGEF1-201ENST00000262215 JPH1Q9HDC5 661 aaPredicted RBP12.91□□□□□ -0.34
ARFGEF1-201ENST00000262215 WDR19Q8NEZ3 1342 aa12.91□□□□□ -0.34
ARFGEF1-201ENST00000262215 TALDO1P37837 337 aa12.91□□□□□ -0.34
ARFGEF1-201ENST00000262215 HARS2P49590 506 aaKnown RBP12.91□□□□□ -0.34
ARFGEF1-201ENST00000262215 CAMK2GQ13555 558 aaPredicted RBP12.91□□□□□ -0.34
ARFGEF1-201ENST00000262215 INAQ16352 499 aa12.91□□□□□ -0.34
ARFGEF1-201ENST00000262215 PCDHA10Q9Y5I2 948 aa12.91□□□□□ -0.34
ARFGEF1-201ENST00000262215 UHRF1BP1Q6BDS2 1440 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms